Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G45400.1
CDS Infomation	\| Replication factor-A protein 1-like protein \| Chr5:18398990-18401644 FORWARD LENGTH=2562 \| 201606
Sequence	ATGGCGGTGAGTTTGACGGAGGGAGTGGTAATGAAGATGTTGAACGGAGAAGTGACGAGC GAGACAGATATGATGCCAGTGCTACAAGTAACGGAATTGAAGCTGATTCAGAGCAAGCTT CATCAAAATCAGGAATCTAGCAATCGATATAAGTTTTTATTATCAGATGGGACTGACTTG GCAGCAGGAATGCTTAATACTTCATTGAACAGTTTAGTGAATCAAGGAACTATTCAATTG GGTTCGGTTATAAGACTCACTCACTACATCTGCAATCTCATCCAGACTCGAAGGATTGTT GTTATTATGCAATTGGAGGTTATTGTGGAGAAATGTAATATAATTGGAAATCCTAAAGAA CCTGGGCATAGCTCGATTAATCCACAACGTGGTGGAGTTAACACACAAAGCAATGGTGGT TCTGAGCAGCAACAAGCTAGAAGGAGTGATGTGAATGGTGGGAGATACGGTGTATCGGCT AATTCGCCTCAACCTCAAGTTGTTCATAACAGTTCCGACGCTGGAAGATACTGTGTATCG GCTAATTCACCTCAGCCTCAAGTTGTTCATAGCAGTTCCGACGCTGGAAGATATGGTGTA TCGGCTAATTCACCTCAGCGTCAAGTTGTTCATAACAGTCCCGACGCTGGGAGATATGGA CAGCCTCAAGTTAGTCAAAGATATGGTACTGGTTCTGGTTATCCGGAAACATCACCTTCC ACTAGACCGTATGTGAGCTCAAATGCAGGTTATGGAGGCTCTAGGCAGGACCAACCTCGG GCTCCTACTGCAACAACTGCTTATTCCCGTCCGGTTCAGTCAGCTTATCAGCCACAACAA CCACCGATGTATGTTAACAGGGGACCTGTGGCTAGGAACGAAGCTCCTCCGAGGATAAAT CCGATTGCTGCTCTTAATCCTTACCAGGGTCGGTGGACCATCAAGGTTAGGGTCACGAGT AAGGCAGACCTGAGGCGGTTTAATAATCCGCGTGGGGAAGGGAAGTTGTTCAGTTTTGAT CTTCTTGATGCTGATGGTGGAGAAATACGGGTGACTTGTTTTAATGATGCGGTTGATCAA TTCTTTGACAAGATTGTAGTTGGTAATGTTTATCTGATTTCAAGGGGAAATTTGAAGCCT GCTCAGAAGAACTTTAATCATCTTCCGAATGATTATGAAATACATTTGGACTCTGCATCA ACGATACAGCCTTGTGAAGATGATGGTACCATTCCACGCTATCATTTCCATTTTCGTAAC ATAGGTGATATTGAAAACATGGAGAACAACAGCACCACTGATGTAATTGGTATTGTTTCG TCCATCAGTCCGACAGTAGCAATTATGCGGAAAAACTTAACTGAGGTACAGAAAAGGTCT CTTCAGTTGAAGGATATGTCAGGCCGAAGTGTTGAGGTAACCATGTGGGGTAATTTCTGC AACGCAGAAGGACAGAAATTGCAAAATCTTTGTGATTCTGGGGTATTCCCGGTTCTTGCT TTGAAAGCGGGCAGGATCGGTGAATTCAACGGGAAGCAAGTGAGCACAATTGGAGCAAGT CAATTCTTTATAGAGCCAGATTTCCCTGAAGCCAGAGAATTAAGGCAATGGTATGAGAGA GAAGGAAGGAATGCTCATTTTACCTCCATATCTAGAGAGTTTTCCGGTGTTGGCAGACAA GAAGTTCGCAAGGTAATTGCACAGATCAAGGACGAGAAGCTAGGGACCTCAGAGAAGCCG GACTGGATCACAGTCTGTGCCACCATTTCATTCATGAAGGTTGAAAATTTCTGCTATACG GCTTGTCCTATCATGAATGGAGATCGTCCATGCAGCAAAAAGGTCACAAATAACGGAGAT GGGACATGGCGTTGTGAGAAGTGTGACAAATGCGTGGATGAATGTGACTACAGGTATATA TTACAGATCCAGTTACAGGACCATACAGACCTAACCTGGGCAACTGCATTCCAAGAAGCT GGTGAAGAGATAATGGGAATGTCTGCAAAAGATTTGTATTATGTGAAGTATGAAAATCAG GATGAGGAGAAATTTGAAGATATCATCCGCAGTGTCGCTTTTACTAAGTACATTTTCAAG CTGAAGATTAAAGAAGAAACTTACAGCGATGAGCAGCGGGTTAAAGCAACAGTTGTGAAA GCTGAAAAGCTGAATTATTCTTCAAATACCAGGTTCATGCTAGAGGCAATAGATAAACTC AAGATAGGAGATGCAAATTCTCTCCCTATAAAGGCAGAGAGTTCCAATTACAGGTCTGAT GCATTTAATTCCGGTGTTGGAACCTCAGGAACTAGAGACACCGCATCAGTCGATGCACGC AGAGAATTTGGATTACCTGCAGCAAACCAAGTGGGTCAATATGGAAATCAGTACAGTAGT GATGCAAGGTCTCTTGGCGGTTTTACTAGCTGCAACGTGTGTCGCAGCAACAGCCATGTT TCTGCAAACTGCCCAACCCTTATGAGTGAGCCACAAGGACAATACATGGGTGGCACAAAT GCAGGAGGAGGTATGCCAAGGCAACATGTAGGCAGCTACTGA

Peptide Sequence

PEP ID	AT5G45400.1
PEP Infomation	\| Replication factor-A protein 1-like protein \| Chr5:18398990-18401644 FORWARD LENGTH=853 \| 201606
Sequence	MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDL AAGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKE PGHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVS ANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSPS TRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAPPRIN PIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQ FFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCEDDGTIPRYHFHFRN IGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNFC NAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYER EGRNAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFCYT ACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEA GEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVK AEKLNYSSNTRFMLEAIDKLKIGDANSLPIKAESSNYRSDAFNSGVGTSGTRDTASVDAR REFGLPAANQVGQYGNQYSSDARSLGGFTSCNVCRSNSHVSANCPTLMSEPQGQYMGGTN AGGGMPRQHVGSY

Transcript Sequence

Transcript ID	AT5G45400.1
Transcript Infomation	\| Replication factor-A protein 1-like protein \| Chr5:18398832-18402284 FORWARD LENGTH=3360 \| 201606
Sequence	CTTTACACATCTTTAGGGTTCAATCATTAAAATCCCTAATTCAATTTATCATCCTTTCTC TTTCGTCTTCTCAATTTCTGAATCAAACCCAATTCCCTTCTCGAAATCTAGTTTCTCTAC AGTGCGAAAATCGAGGTTAATTGTGTTCGTCGGAAACGATGGCGGTGAGTTTGACGGAGG GAGTGGTAATGAAGATGTTGAACGGAGAAGTGACGAGCGAGACAGATATGATGCCAGTGC TACAAGTAACGGAATTGAAGCTGATTCAGAGCAAGCTTCATCAAAATCAGGAATCTAGCA ATCGATATAAGTTTTTATTATCAGATGGGACTGACTTGGCAGCAGGAATGCTTAATACTT CATTGAACAGTTTAGTGAATCAAGGAACTATTCAATTGGGTTCGGTTATAAGACTCACTC ACTACATCTGCAATCTCATCCAGACTCGAAGGATTGTTGTTATTATGCAATTGGAGGTTA TTGTGGAGAAATGTAATATAATTGGAAATCCTAAAGAACCTGGGCATAGCTCGATTAATC CACAACGTGGTGGAGTTAACACACAAAGCAATGGTGGTTCTGAGCAGCAACAAGCTAGAA GGAGTGATGTGAATGGTGGGAGATACGGTGTATCGGCTAATTCGCCTCAACCTCAAGTTG TTCATAACAGTTCCGACGCTGGAAGATACTGTGTATCGGCTAATTCACCTCAGCCTCAAG TTGTTCATAGCAGTTCCGACGCTGGAAGATATGGTGTATCGGCTAATTCACCTCAGCGTC AAGTTGTTCATAACAGTCCCGACGCTGGGAGATATGGACAGCCTCAAGTTAGTCAAAGAT ATGGTACTGGTTCTGGTTATCCGGAAACATCACCTTCCACTAGACCGTATGTGAGCTCAA ATGCAGGTTATGGAGGCTCTAGGCAGGACCAACCTCGGGCTCCTACTGCAACAACTGCTT ATTCCCGTCCGGTTCAGTCAGCTTATCAGCCACAACAACCACCGATGTATGTTAACAGGG GACCTGTGGCTAGGAACGAAGCTCCTCCGAGGATAAATCCGATTGCTGCTCTTAATCCTT ACCAGGGTCGGTGGACCATCAAGGTTAGGGTCACGAGTAAGGCAGACCTGAGGCGGTTTA ATAATCCGCGTGGGGAAGGGAAGTTGTTCAGTTTTGATCTTCTTGATGCTGATGGTGGAG AAATACGGGTGACTTGTTTTAATGATGCGGTTGATCAATTCTTTGACAAGATTGTAGTTG GTAATGTTTATCTGATTTCAAGGGGAAATTTGAAGCCTGCTCAGAAGAACTTTAATCATC TTCCGAATGATTATGAAATACATTTGGACTCTGCATCAACGATACAGCCTTGTGAAGATG ATGGTACCATTCCACGCTATCATTTCCATTTTCGTAACATAGGTGATATTGAAAACATGG AGAACAACAGCACCACTGATGTAATTGGTATTGTTTCGTCCATCAGTCCGACAGTAGCAA TTATGCGGAAAAACTTAACTGAGGTACAGAAAAGGTCTCTTCAGTTGAAGGATATGTCAG GCCGAAGTGTTGAGGTAACCATGTGGGGTAATTTCTGCAACGCAGAAGGACAGAAATTGC AAAATCTTTGTGATTCTGGGGTATTCCCGGTTCTTGCTTTGAAAGCGGGCAGGATCGGTG AATTCAACGGGAAGCAAGTGAGCACAATTGGAGCAAGTCAATTCTTTATAGAGCCAGATT TCCCTGAAGCCAGAGAATTAAGGCAATGGTATGAGAGAGAAGGAAGGAATGCTCATTTTA CCTCCATATCTAGAGAGTTTTCCGGTGTTGGCAGACAAGAAGTTCGCAAGGTAATTGCAC AGATCAAGGACGAGAAGCTAGGGACCTCAGAGAAGCCGGACTGGATCACAGTCTGTGCCA CCATTTCATTCATGAAGGTTGAAAATTTCTGCTATACGGCTTGTCCTATCATGAATGGAG ATCGTCCATGCAGCAAAAAGGTCACAAATAACGGAGATGGGACATGGCGTTGTGAGAAGT GTGACAAATGCGTGGATGAATGTGACTACAGGTATATATTACAGATCCAGTTACAGGACC ATACAGACCTAACCTGGGCAACTGCATTCCAAGAAGCTGGTGAAGAGATAATGGGAATGT CTGCAAAAGATTTGTATTATGTGAAGTATGAAAATCAGGATGAGGAGAAATTTGAAGATA TCATCCGCAGTGTCGCTTTTACTAAGTACATTTTCAAGCTGAAGATTAAAGAAGAAACTT ACAGCGATGAGCAGCGGGTTAAAGCAACAGTTGTGAAAGCTGAAAAGCTGAATTATTCTT CAAATACCAGGTTCATGCTAGAGGCAATAGATAAACTCAAGATAGGAGATGCAAATTCTC TCCCTATAAAGGCAGAGAGTTCCAATTACAGGTCTGATGCATTTAATTCCGGTGTTGGAA CCTCAGGAACTAGAGACACCGCATCAGTCGATGCACGCAGAGAATTTGGATTACCTGCAG CAAACCAAGTGGGTCAATATGGAAATCAGTACAGTAGTGATGCAAGGTCTCTTGGCGGTT TTACTAGCTGCAACGTGTGTCGCAGCAACAGCCATGTTTCTGCAAACTGCCCAACCCTTA TGAGTGAGCCACAAGGACAATACATGGGTGGCACAAATGCAGGAGGAGGTATGCCAAGGC AACATGTAGGCAGCTACTGAAAAACTTAAGTGACTATTTCACCTCATCATTATCATCAAC AATGGTCAGATGCTGTTTTGACCGTCTTAAGTTTTTACTTATCTACAACATTAGGATGCT TCAGTTCCATTTTTCGTGGGTCTTTTAGTGTTTCTGTTTTCTATTTTTTTTTTTTTTTGT GTTTTTGTTTTCTTTGTATAACTCTCTTTATTACTAGATGAGGTTAAGTTTTCTGATTGA AGTAAAGTCAATAACTTTCTTTTGAATTGTAAGAGAGGTTAAAGAGGGAATTATTAACCT TTTATTTAGACCCATTTTGAAGGGATAAAACGACACCATTGTTATGGTTTACACAATTCA CTGAATTACAAAAACCTTCCCTCACACACAAATATCCAATCCTTACATAGTAATTTGTAG TTTCTGAAATCAATAAGAACATTCTCTCAATAACAGAGTCCAGTTGATTTAGCAGACTCT CCAATATTTACATTGTAATAAACCTGCTTCACTCCCTCCCCTATACCACAATGTCCCCCA GAAATGCCTGAGTCGCCAGGGCTCTGGTTGTATCCAGAAACCATAGCGGTTACAGGAACC ATTTTCTCAGCTACTGCTTTGAGACGGTAACGCTCAGCTCTTGACCCAATCACCTGTCCC