Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G44690.1
CDS Infomation	\| RING finger PFF0165c-like protein \| Chr5:18029707-18032293 REVERSE LENGTH=1989 \| 201606
Sequence	ATGGCTTCGAGGGATGGTAACAAGAAAAAAAAGAATCTCAAAGTTTTTGTCAGAGATCGT TACAACAGCTTTCGTGTTTTGCCTATCGATGATTCTGGAAGTAACGAAGATGGGAAGCGT AAAGAGGTTATTGAATGTTCTTCAAGATCCCCTGTTTTTGAAACAGGGGAATCTTTGCAG ATTCCTTCTTCTTATCCACTAGAGACCAATTCCAATCCATTTTATATTCCTGGTCAACCT GAGACCTCGTCAAGAAATGGTGTCAGCATGGGAGCTTCTTCTCTGGTTCAGATTTGGGAA GCTCGGTCGCAGCAGTCAAGTTCGAGTCTAAGTCAATCGCTACTCGATAGCAGGACGAGT TCTGAATCAAGTCTCTCCGACTTTCTCAACGACGAGGCGAGAAAAAGCAACGAAAGCAGT GGTGAAGAAATAGATTGGTTTCCTCAATCAGATATGAATAATGTTTCAAATTCTTATGAG AATGATGGAGAAGGAAGATGTTTTCTTGAGCTGGCTAGTTGTAGTACTCCTAGGATAAGA GGACGGCAAGCAAGTGAAGATGTTTGTAAGATGATTTTGCGTGACCGAGAAAATGAGCTT GAATTGCTCGGTGGTCGCTACGCGGTTTCAAAGTTCTCGCCTCGCGGTTGTGGGCGTCTT CAGTATATGCTTATGATCCGAAGTTTGGAAAGGTGCATTGTGATTCAAGAAAGATATCGG TCGAAATCAGATGTAAACCGGTTTTCACGAGGATCTAGGAATAGATATATGGCTAATACT AAGAAGGGATTTCGGAGCAATTTGAATAGCGCAGTAGAAACAAAAAATTTGTCTGGAGTA GTATATTTTAGGGTGAAGAGTGTTTTGCAAGAAACAATGGAGAAAAGTAACACAAGGGAG AATCAGGCCGCGGCTGATAAGCCGGAAATTGCCAATAAACCCGTCTTTAATGATGCTGCA AGCAATGAGAACGGTTCAAAGAAACCTGAAATTGAGCGGAAAGCTACAGAAGAAGGAGAA GGGTTGAGGAAAGTTACTGTGAAGGAAGGAGAAGAAACGAACAAGTTCTCATCGAGTTTT GTAGAGAAGGTGTATCTTTGGGATTCTAAGGAGAGAGCTAATAGGAGAAGAACTATGGGG AAAGCTAAAGACGAGGGAAAAGATGCAAGAAGAGTCATTGATGTGAAGACTGAAGGGAGA AACGAAGAAAGGCGAAAGAAAGAAGAAGGTAAATCCATGGAGATTGAGGAATATAGAAGC AACCCTCAAGAAGTGACATCAGTGGTTTGTTTGGATAGAGAAAAGGATGAAGAAACTGCA AGACAAGTATTTAGAGAGAGTGGTAAAGAGGAAAAATCTTCACAAAACGATGAAGAAACA TCAAAAGCCGAGAAGCAACAAGCAGCGGAAACATTGTTTCTAATTCTTGAATCACCAATA TTTCTAAATGCTTGGGATGAAAATGAAACAGAAAATGAAGAAAATGAAGATTGCAATAGA GAGATTATGTATTATGATTGGATTAGTGATATCTCGCGGCCAAGAAGTTATTGGGAAGAT CTCAAGAAACAACGGGTGCTCGAGGTTATGAACAATATTTCCGAGAAAGGCGATATGTGG AACTTGATCAAGTGGAGGACCGTTTCTAGCTTCCTCGAAGGTGATTTTCGGGAAAAGATT GATAAAATCATGATCTCATGCGTGCAAAAGAGGTCAGAAATAGGAAGCAATCTTGTAGAA GAAGAAGAAGGTAACGAGGAGACTTTGGTTGAGTGTTCAGAAAGGTACCAAGGGAACGTA GAAGAAAATGAAACAAAAAAGTTAATCCTTGAACCAGAAACTGAAACACAGATGATATGT GATCTCAAACAACAAATCAAACAGCTTCAAAGAGATATTCTTGAACTACAAAGTTTGGTA AAATCTTGTGTTGATTTCCAGAAATCCTTGGAATTCGAATCACTTTCTGGTACCAATGTC TGCTTGTAA

Peptide Sequence

PEP ID	AT5G44690.1
PEP Infomation	\| RING finger PFF0165c-like protein \| Chr5:18029707-18032293 REVERSE LENGTH=662 \| 201606
Sequence	MASRDGNKKKKNLKVFVRDRYNSFRVLPIDDSGSNEDGKRKEVIECSSRSPVFETGESLQ IPSSYPLETNSNPFYIPGQPETSSRNGVSMGASSLVQIWEARSQQSSSSLSQSLLDSRTS SESSLSDFLNDEARKSNESSGEEIDWFPQSDMNNVSNSYENDGEGRCFLELASCSTPRIR GRQASEDVCKMILRDRENELELLGGRYAVSKFSPRGCGRLQYMLMIRSLERCIVIQERYR SKSDVNRFSRGSRNRYMANTKKGFRSNLNSAVETKNLSGVVYFRVKSVLQETMEKSNTRE NQAAADKPEIANKPVFNDAASNENGSKKPEIERKATEEGEGLRKVTVKEGEETNKFSSSF VEKVYLWDSKERANRRRTMGKAKDEGKDARRVIDVKTEGRNEERRKKEEGKSMEIEEYRS NPQEVTSVVCLDREKDEETARQVFRESGKEEKSSQNDEETSKAEKQQAAETLFLILESPI FLNAWDENETENEENEDCNREIMYYDWISDISRPRSYWEDLKKQRVLEVMNNISEKGDMW NLIKWRTVSSFLEGDFREKIDKIMISCVQKRSEIGSNLVEEEEGNEETLVECSERYQGNV EENETKKLILEPETETQMICDLKQQIKQLQRDILELQSLVKSCVDFQKSLEFESLSGTNV CL

Transcript Sequence

Transcript ID	AT5G44690.1
Transcript Infomation	\| RING finger PFF0165c-like protein \| Chr5:18029338-18032293 REVERSE LENGTH=2358 \| 201606
Sequence	ATGGCTTCGAGGGATGGTAACAAGAAAAAAAAGAATCTCAAAGTTTTTGTCAGAGATCGT TACAACAGCTTTCGTGTTTTGCCTATCGATGATTCTGGAAGTAACGAAGATGGGAAGCGT AAAGAGGTTATTGAATGTTCTTCAAGATCCCCTGTTTTTGAAACAGGGGAATCTTTGCAG ATTCCTTCTTCTTATCCACTAGAGACCAATTCCAATCCATTTTATATTCCTGGTCAACCT GAGACCTCGTCAAGAAATGGTGTCAGCATGGGAGCTTCTTCTCTGGTTCAGATTTGGGAA GCTCGGTCGCAGCAGTCAAGTTCGAGTCTAAGTCAATCGCTACTCGATAGCAGGACGAGT TCTGAATCAAGTCTCTCCGACTTTCTCAACGACGAGGCGAGAAAAAGCAACGAAAGCAGT GGTGAAGAAATAGATTGGTTTCCTCAATCAGATATGAATAATGTTTCAAATTCTTATGAG AATGATGGAGAAGGAAGATGTTTTCTTGAGCTGGCTAGTTGTAGTACTCCTAGGATAAGA GGACGGCAAGCAAGTGAAGATGTTTGTAAGATGATTTTGCGTGACCGAGAAAATGAGCTT GAATTGCTCGGTGGTCGCTACGCGGTTTCAAAGTTCTCGCCTCGCGGTTGTGGGCGTCTT CAGTATATGCTTATGATCCGAAGTTTGGAAAGGTGCATTGTGATTCAAGAAAGATATCGG TCGAAATCAGATGTAAACCGGTTTTCACGAGGATCTAGGAATAGATATATGGCTAATACT AAGAAGGGATTTCGGAGCAATTTGAATAGCGCAGTAGAAACAAAAAATTTGTCTGGAGTA GTATATTTTAGGGTGAAGAGTGTTTTGCAAGAAACAATGGAGAAAAGTAACACAAGGGAG AATCAGGCCGCGGCTGATAAGCCGGAAATTGCCAATAAACCCGTCTTTAATGATGCTGCA AGCAATGAGAACGGTTCAAAGAAACCTGAAATTGAGCGGAAAGCTACAGAAGAAGGAGAA GGGTTGAGGAAAGTTACTGTGAAGGAAGGAGAAGAAACGAACAAGTTCTCATCGAGTTTT GTAGAGAAGGTGTATCTTTGGGATTCTAAGGAGAGAGCTAATAGGAGAAGAACTATGGGG AAAGCTAAAGACGAGGGAAAAGATGCAAGAAGAGTCATTGATGTGAAGACTGAAGGGAGA AACGAAGAAAGGCGAAAGAAAGAAGAAGGTAAATCCATGGAGATTGAGGAATATAGAAGC AACCCTCAAGAAGTGACATCAGTGGTTTGTTTGGATAGAGAAAAGGATGAAGAAACTGCA AGACAAGTATTTAGAGAGAGTGGTAAAGAGGAAAAATCTTCACAAAACGATGAAGAAACA TCAAAAGCCGAGAAGCAACAAGCAGCGGAAACATTGTTTCTAATTCTTGAATCACCAATA TTTCTAAATGCTTGGGATGAAAATGAAACAGAAAATGAAGAAAATGAAGATTGCAATAGA GAGATTATGTATTATGATTGGATTAGTGATATCTCGCGGCCAAGAAGTTATTGGGAAGAT CTCAAGAAACAACGGGTGCTCGAGGTTATGAACAATATTTCCGAGAAAGGCGATATGTGG AACTTGATCAAGTGGAGGACCGTTTCTAGCTTCCTCGAAGGTGATTTTCGGGAAAAGATT GATAAAATCATGATCTCATGCGTGCAAAAGAGGTCAGAAATAGGAAGCAATCTTGTAGAA GAAGAAGAAGGTAACGAGGAGACTTTGGTTGAGTGTTCAGAAAGGTACCAAGGGAACGTA GAAGAAAATGAAACAAAAAAGTTAATCCTTGAACCAGAAACTGAAACACAGATGATATGT GATCTCAAACAACAAATCAAACAGCTTCAAAGAGATATTCTTGAACTACAAAGTTTGGTA AAATCTTGTGTTGATTTCCAGAAATCCTTGGAATTCGAATCACTTTCTGGTACCAATGTC TGCTTGTAAAGTCTAGAAAGCGATTGCGGTTAAATCGCAAACGAGATCATAAAATTGCAG TTTTGTTTCGCAGGTGTGGACATATGTGCACTTGTCTGAAATGTGCTCATGAGCTTCAAT GGAGTAATATGAAATGTCCGATCTGCATGGCTCCAATTGTAGATGTTGTGAGGGCATTTC TTGATTCTTAGGGCACAAGAAAGACAAGAAAAAACTTTACCTATTTCAGAAATTTAATTT GGCAAGGTGAAACACTCTGATCATATATGCTAAAGTAAAAAGTTTTTCTTTTATATGTTA TAAAATTATACATGTATATATAATAAGATTGTAATTTGTAAATATGTTTTTTTTTAAAAT TGATGATTTTATATAATC