Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G43920.1
CDS Infomation

| transducin family protein / WD-40 repeat family protein | Chr5:17673397-17675630 FORWARD LENGTH=1572 | 201606
Sequence

ATGGAGAATGGGTTATGGGAGGTTTTAGGTTCAAAAGGGTTGTTGAAGAAACATGAATTC
ATTAGGATTTTGGTTCAATGCTTATACTCGTTAGGATTCAAGAACTCTGCTTCTTGTCTG
GAATTCGAGTCAAAGATCTTGTATAAAACAGCTGATTCTGAGTTTCTTGAAAAGCAAGTT
TTGAGTGGGAACTGGGATAGTTGCGTACAGGTTCTAGACAGAATTTTTGATAATTCCATG
GATGATACGAGGAACACGGCTTTATATCTAGTGTTCAAGCAATGTTTGTTGGAGTATTTG
AAACGTGGGGATGTTTCTTTGGCCTTGAATGTGTTACGGAAGCAAGCTCCGTTGTTACGG
ATGGGAAAAGAGAAGATTCATAGGCTTGCTTGTGATATTGTTTATTCGAAAGAGATGGAA
TCCGGTGAAGTAGACAACTGTTTAGTTCTAGATTTGAGGAGAAAGTTGTTGGTTGAACTG
GAGAAGTTGATTCCCTTGCCAATTGTTATTCCTGAGAGAAGGTTGGAACATTTGGTTGAG
ACTGCTGTGATGGACCAGATTGATACGTGTATGTATCATAACTCATGTGATGCAGTATCG
CTTTACAAGGATCACTGTTGCGGTAGAGACCAAATTCCTTCAGAGACAGTCCAGATTTTG
GTGGCACACAAAAATGAAGTGTGGTTTGTGCAATTCTCTAATAGTGGCAAATATCTGGCC
ACTGCATCAAGCGATTGTACAGCTATAATATGGAAGGTACTGGATGACAACAAAGTCGAA
CTGAAGCACACACTTGAGAGCCACCAAAATCCAGTTTCTTTTGTCTCGTGGAGTCCTGAC
GATACTAAACTGCTTACATGCGGAAACGCTGAGGTTCTTAAGCTATGGGATGTTGACACA
GGTGTGTTGAGACACACATTTGGAAACAACAATACTGGATTCACTGTCAGCTCTTGCGCA
TGGTTCCCTGACTCAACTCGGCTTGTCTGTGGCAGTTCTGACCCAGAAAGAGGGATTGTA
ATGTGGGACACTGATGGAAACGAGATCAAAGCCTGGAGAGGAACGAGAATTCCAAAGGTG
GTGGATTTGGCTGTGACGCCGGATGGCGAGAGTATGATTACAGTGTTTTCGGATAAAGAG
ATCCGGATCTTGAATTTGGAGACAAAAGTCGAACGTGTTATCTCTGAGGAACAGCCAATT
ACTTCCCTTTCAATTTCTGGTGATGGTAAGTTTTTTATAGTCAACTTGAGCTGCCAAGAG
ATACATCTTTGGGATCTTGCTGGAGAGTGGAAACAACCATTGAAGTTCTCGGGTCACAGG
CAGAGCAAATACGTGATACGGTCATGTTTTGGTGGGTTGGATAGTTCGTTCATCGCCAGT
GGAAGTGAGGATTCACAGGTTTACATATGGAATCTAAAGAACACAAAGCCGCTTGAAGTG
TTATCAGGTCATTCGATGACCGTAAACTGTGTAAGCTGGAACCCGAAAAATCCTCGGATG
CTAGCCTCTGCTAGTGATGACCAAACCATCCGTATTTGGGGACCGGGCAAACCGAACAAA
CCACTGAACTGA

Peptide Sequence

PEP ID

AT5G43920.1
PEP Infomation

| transducin family protein / WD-40 repeat family protein | Chr5:17673397-17675630 FORWARD LENGTH=523 | 201606
Sequence

MENGLWEVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQV
LSGNWDSCVQVLDRIFDNSMDDTRNTALYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLR
MGKEKIHRLACDIVYSKEMESGEVDNCLVLDLRRKLLVELEKLIPLPIVIPERRLEHLVE
TAVMDQIDTCMYHNSCDAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLA
TASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDT
GVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKV
VDLAVTPDGESMITVFSDKEIRILNLETKVERVISEEQPITSLSISGDGKFFIVNLSCQE
IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEV
LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGKPNKPLN

Transcript Sequence

Transcript ID

AT5G43920.1
Transcript Infomation

| transducin family protein / WD-40 repeat family protein | Chr5:17672628-17676023 FORWARD LENGTH=2734 | 201606
Sequence

AAAAAATTCTAATATATGACTAACCGTATAACCTTAACGATAGGGATTAGCGATAGGACT
TAACGATATAAACACATATGTATATGGTTTTCGACCTCTCTTCTCCAAAACCATCACAGA
GAGAGTCGCCGAAATAAATTGAAATCCGGTGAGAAGATTTTGGATTCACTCCTTCCTTCT
TTCTTCTTCTTTATCATCATTTGAGCTGGTTTTGGTATCTCTCCTGACGAATTTGAATCT
CTCAGCCATTTTCTCTTCTCGCATCTGTGTTTTCGTGCTTGGAGCTGTACACGTTTCTTT
AATTTGAATAGTGATTTTGCGTTCGTTAATTAGCCTTCTCGTACGAGTGGGCTATTTTGG
GAATGATTTAGGTGGTTTTAAGTTACTGGGTAGTAGTCACTGCTGAGCGATTTCTGTTTC
TCCTGTTGAATGATTGATTCAGAAATTTGAAATTCACATCGAAACCAAATCTTAAATCAT
ATTGGTAGCTTTTTTTTTGTTTTGTGATTAGATACTGTTTTTTTATAGTATTAAATTCGT
TTTGGTGTGAGTGATTTAGTGTTTGGGAAATTATTTAATTTAGTGGTTATTTTCTGATTT
AGTGATGATTTGAGAATTTTGTGTTGTTTATATTCTTGGTAGCGGGAAATTTGTACTTTC
CTTTGTGGACCTTTCAACTATTGAATGTGGAAGATTTGCTGAGAATCTTAGAAAGTCATC
ATCATCCATACGTAAGAGAACTTTTTTTTAGCTTGAGAGTGATTTTCAGATGGAGAATGG
GTTATGGGAGGTTTTAGGTTCAAAAGGGTTGTTGAAGAAACATGAATTCATTAGGATTTT
GGTTCAATGCTTATACTCGTTAGGATTCAAGAACTCTGCTTCTTGTCTGGAATTCGAGTC
AAAGATCTTGTATAAAACAGCTGATTCTGAGTTTCTTGAAAAGCAAGTTTTGAGTGGGAA
CTGGGATAGTTGCGTACAGGTTCTAGACAGAATTTTTGATAATTCCATGGATGATACGAG
GAACACGGCTTTATATCTAGTGTTCAAGCAATGTTTGTTGGAGTATTTGAAACGTGGGGA
TGTTTCTTTGGCCTTGAATGTGTTACGGAAGCAAGCTCCGTTGTTACGGATGGGAAAAGA
GAAGATTCATAGGCTTGCTTGTGATATTGTTTATTCGAAAGAGATGGAATCCGGTGAAGT
AGACAACTGTTTAGTTCTAGATTTGAGGAGAAAGTTGTTGGTTGAACTGGAGAAGTTGAT
TCCCTTGCCAATTGTTATTCCTGAGAGAAGGTTGGAACATTTGGTTGAGACTGCTGTGAT
GGACCAGATTGATACGTGTATGTATCATAACTCATGTGATGCAGTATCGCTTTACAAGGA
TCACTGTTGCGGTAGAGACCAAATTCCTTCAGAGACAGTCCAGATTTTGGTGGCACACAA
AAATGAAGTGTGGTTTGTGCAATTCTCTAATAGTGGCAAATATCTGGCCACTGCATCAAG
CGATTGTACAGCTATAATATGGAAGGTACTGGATGACAACAAAGTCGAACTGAAGCACAC
ACTTGAGAGCCACCAAAATCCAGTTTCTTTTGTCTCGTGGAGTCCTGACGATACTAAACT
GCTTACATGCGGAAACGCTGAGGTTCTTAAGCTATGGGATGTTGACACAGGTGTGTTGAG
ACACACATTTGGAAACAACAATACTGGATTCACTGTCAGCTCTTGCGCATGGTTCCCTGA
CTCAACTCGGCTTGTCTGTGGCAGTTCTGACCCAGAAAGAGGGATTGTAATGTGGGACAC
TGATGGAAACGAGATCAAAGCCTGGAGAGGAACGAGAATTCCAAAGGTGGTGGATTTGGC
TGTGACGCCGGATGGCGAGAGTATGATTACAGTGTTTTCGGATAAAGAGATCCGGATCTT
GAATTTGGAGACAAAAGTCGAACGTGTTATCTCTGAGGAACAGCCAATTACTTCCCTTTC
AATTTCTGGTGATGGTAAGTTTTTTATAGTCAACTTGAGCTGCCAAGAGATACATCTTTG
GGATCTTGCTGGAGAGTGGAAACAACCATTGAAGTTCTCGGGTCACAGGCAGAGCAAATA
CGTGATACGGTCATGTTTTGGTGGGTTGGATAGTTCGTTCATCGCCAGTGGAAGTGAGGA
TTCACAGGTTTACATATGGAATCTAAAGAACACAAAGCCGCTTGAAGTGTTATCAGGTCA
TTCGATGACCGTAAACTGTGTAAGCTGGAACCCGAAAAATCCTCGGATGCTAGCCTCTGC
TAGTGATGACCAAACCATCCGTATTTGGGGACCGGGCAAACCGAACAAACCACTGAACTG
ATTAGATAACCAGAAACCGTAGTAGCTTTAAACCAGGACCTAGTTCTAGTAGTTCCACAT
TTGTGTATAGTTCATTTCTGGTTTTTTCTTTTTTGGTGGTCCTTATTGGCTTTGCAGAAC
AATCTCTTGCTTTTTGAGTTTTGGTACACTGGTTTTGGAGAACTTGATTTGAGATGAGCC
ATGAATTGAAACCAAACCGGTTTAGGCGGTAAACTGAACCAAGCTGTGTTGAGGAGTTAG
GTGGCAATTGTTTGGTGTTCAGAGCAAAACTTAGCTAACTACTTGTTTCGTTGGTCATTT
GCTACCATGTGGGTTCCCCGTTATTTTAAACAGAAAATTTAATTATAATATAAACTTCGG
AAACGCCCCTAAACTTATGATATTTAAGAATCTG