Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G43870.1
CDS Infomation	\| auxin canalization protein (DUF828) \| Chr5:17632538-17635863 REVERSE LENGTH=1362 \| 201606
Sequence	ATGGATCAAAAAAGTAAAACGATTGGAGAACAATGGTGGAGGTCAAATCCAACGTTTAAA CCGCCTGAAACGCCATTAGATTCTATGGAGTTTTTGTCACGTACTTGGAGTGCTTCCGCT ACTGAAGTTTCAAGAGCTGTCGTCGCGTCTCCACCGACTTCTCAACCGCCGCAAATGCGT TTCTCGGAGATCCAAAACGGTTCTTCTGACGTCACTTTGGTGCCGGAAGATGAAGAAAAC GGCATCGTTCTTGGAAATACTTTTTCTTTTGCTTCTTCAGAAACTTCTTTAATGGTCATG GAACGTATCATGGCTCAGTCACCGGAGATTTCATCGCCACGAACATCAGGGAGACTTTCT CATAGCTCATTCACCGACAGTCCTCCGATCTCTCCCTCCGACATCGACGACTTTAAGCAA TTCTACCGTGTGAGCCCTTCCTTTAACGGCCACATACGTGGTTCATCAGCCATTCCCGGC ACCGCCGGAGGGTCTAAAACTGTTGGTCGTTGGCTAAAGGACCGGCGAGAGAAGAAGAGA GAAGAGACGCGTGCACAAAATGCACAGCTTCACGCGGCTGTATCTGTAGCTGGAGTGGCT GCCGCGGTGGCTGCTATCGCTGCAGCCACTGCCTCTCAGTCGAGTTCTGGAACTGACGAG CAAGTGGCCAAAAATGACTCCGCGGTGGCTTCTGCCGCGACTTTGGTGGCGGCGAAGTGT GTGGAAGCTGCAGAGATTATGGGAGCTGATCGTGAGCACTTGGCCTCCGTTGTTAGTTCT GCGGTTAACGTTCGTTCTGCCGGAGATATCATGACTTTGACCGCCGCTGCTGCCACAGCT TTGAGAGGAGCTGCACAATTAAAGGCAAGAGCATTGAAGGAGGTATGGAACATTGCGGCT GTGATTCCTGTAGATAAGGGTACACCAAAAGGCGGTGGTGGTGGTTATAGAGGTGGCGAG TTAGCCCCTGTAGATAATTTTCTTGGGATTTGCAGTAAAGAATTGCTAGCTAAAGGTTGC GAATTGCTTAAACGCACCCGCAAAGGTGATCTTCATTGGAAAGTTGTTTCGATCTACATT AATAGAACAAAGCAGGTAATATTGAAGACTAAGAGCAAACATGTTGCTGGGACCATCACA AAGAAGAAAAAGAATGTGGTGGTGGGATTGGTTAAGGGATTACCGGCGTGGCCTGGCCGG GAAATGCTCGAGGGTGGAGAGAATTTGAGGTATTTCGGGCTGAAGACGGTGGAGAAAAGA GTGATTGAATTCGAGTGCAAAAGCCAAAGGGAATATGATCTTTGGACACAAGGTGTTTCC ATGCTTCTTTCCATTGCTTCTGATAGGAAACATAAATGTTGA

Peptide Sequence

PEP ID	AT5G43870.1
PEP Infomation	\| auxin canalization protein (DUF828) \| Chr5:17632538-17635863 REVERSE LENGTH=453 \| 201606
Sequence	MDQKSKTIGEQWWRSNPTFKPPETPLDSMEFLSRTWSASATEVSRAVVASPPTSQPPQMR FSEIQNGSSDVTLVPEDEENGIVLGNTFSFASSETSLMVMERIMAQSPEISSPRTSGRLS HSSFTDSPPISPSDIDDFKQFYRVSPSFNGHIRGSSAIPGTAGGSKTVGRWLKDRREKKR EETRAQNAQLHAAVSVAGVAAAVAAIAAATASQSSSGTDEQVAKNDSAVASAATLVAAKC VEAAEIMGADREHLASVVSSAVNVRSAGDIMTLTAAAATALRGAAQLKARALKEVWNIAA VIPVDKGTPKGGGGGYRGGELAPVDNFLGICSKELLAKGCELLKRTRKGDLHWKVVSIYI NRTKQVILKTKSKHVAGTITKKKKNVVVGLVKGLPAWPGREMLEGGENLRYFGLKTVEKR VIEFECKSQREYDLWTQGVSMLLSIASDRKHKC

Transcript Sequence

Transcript ID	AT5G43870.1
Transcript Infomation	\| auxin canalization protein (DUF828) \| Chr5:17631426-17635915 REVERSE LENGTH=2526 \| 201606
Sequence	CCCCACGTTCTCTCTAACACACACACACACTCTCTCTCTCTTTCATTAGATAATGGATCA AAAAAGTAAAACGATTGGAGAACAATGGTGGAGGTCAAATCCAACGTTTAAACCGCCTGA AACGCCATTAGATTCTATGGAGTTTTTGTCACGTACTTGGAGTGCTTCCGCTACTGAAGT TTCAAGAGCTGTCGTCGCGTCTCCACCGACTTCTCAACCGCCGCAAATGCGTTTCTCGGA GATCCAAAACGGTTCTTCTGACGTCACTTTGGTGCCGGAAGATGAAGAAAACGGCATCGT TCTTGGAAATACTTTTTCTTTTGCTTCTTCAGAAACTTCTTTAATGGTCATGGAACGTAT CATGGCTCAGTCACCGGAGATTTCATCGCCACGAACATCAGGGAGACTTTCTCATAGCTC ATTCACCGACAGTCCTCCGATCTCTCCCTCCGACATCGACGACTTTAAGCAATTCTACCG TGTGAGCCCTTCCTTTAACGGCCACATACGTGGTTCATCAGCCATTCCCGGCACCGCCGG AGGGTCTAAAACTGTTGGTCGTTGGCTAAAGGACCGGCGAGAGAAGAAGAGAGAAGAGAC GCGTGCACAAAATGCACAGCTTCACGCGGCTGTATCTGTAGCTGGAGTGGCTGCCGCGGT GGCTGCTATCGCTGCAGCCACTGCCTCTCAGTCGAGTTCTGGAACTGACGAGCAAGTGGC CAAAAATGACTCCGCGGTGGCTTCTGCCGCGACTTTGGTGGCGGCGAAGTGTGTGGAAGC TGCAGAGATTATGGGAGCTGATCGTGAGCACTTGGCCTCCGTTGTTAGTTCTGCGGTTAA CGTTCGTTCTGCCGGAGATATCATGACTTTGACCGCCGCTGCTGCCACAGCTTTGAGAGG AGCTGCACAATTAAAGGCAAGAGCATTGAAGGAGGTATGGAACATTGCGGCTGTGATTCC TGTAGATAAGGGTACACCAAAAGGCGGTGGTGGTGGTTATAGAGGTGGCGAGTTAGCCCC TGTAGATAATTTTCTTGGGATTTGCAGTAAAGAATTGCTAGCTAAAGGTTGCGAATTGCT TAAACGCACCCGCAAAGGTGATCTTCATTGGAAAGTTGTTTCGATCTACATTAATAGAAC AAAGCAGGTAATATTGAAGACTAAGAGCAAACATGTTGCTGGGACCATCACAAAGAAGAA AAAGAATGTGGTGGTGGGATTGGTTAAGGGATTACCGGCGTGGCCTGGCCGGGAAATGCT CGAGGGTGGAGAGAATTTGAGGTATTTCGGGCTGAAGACGGTGGAGAAAAGAGTGATTGA ATTCGAGTGCAAAAGCCAAAGGGAATATGATCTTTGGACACAAGGTGTTTCCATGCTTCT TTCCATTGCTTCTGATAGGAAACATAAATGTTGAATTAAGGTATAGTCTTGGGTAAAGTC ACATGAATATGGAAACTAATGGGGCAAATTTGTATTATCTATTTTTCTTGGTGTGCCTTT TTTCTAGCTAGAAGAGATATTGGGTCTGAGCTGTCTAATTTATATTTTTAAAGTAAGATC TTTGTATTAGAAGAATATGTAAATTACATGATATTCTTTTAAAGGTTTTGAAAGTTCACT CTTCTAGTATTGTGAATGTGATCGGGTTAATATCATAAGCAAAGAGGTGACTTAAAGAGT TGTACAATATAAGTTTGTAAAACCATAAGCAACAAAAGCTGATGATATTGACAATAGAAA AACCAGCCCCTAAAGAAAAACTTATGTTTACATGATAACCTCAAACTCTTGAATTTCAAC GGGAACATCCTCGTGACACCCATCTTTGATCTTAACTAATTCACGATCATCTCCTTCCAA ATAAGCCTTCAAAAATGATACAACAAGTCCACCAACGAATCTCCTCATTGGTCTCCTCTC TTCACCATTCTTACACAAACAATAAGAACTCTTCCCTCTAATCCCTTTTGTATCATCATC AAGCATGTCCAAATGCCCATAATCCTTCGCAACGAAATGCCATGCTGGACCTTGACATTC CCGAAAGAACTCTCGGTGATTCACTCCGGGAGGTGCACACGGTGGGAATAATGGGTTCCG AGCGGTTTCACCAAGCCCCGAACCGATCACAAGTATAGGCGTTTTGTCTAGGTCAAATGA GTTTGGAAGGTAAGCCAACACCGGAGGAGGGGTTTGTTTCCCTTTCCCTGTTCCATCGAC TGGATCTATACCGATCAATGTCGAGATCTTTAGATTCGAGGAGTACCCAAATTTCTTTAA GGCGACCGCAAACGCGGTTTTGCCACCGCGGCTATGGCCGGAGAGGGCAAATTTGGATAG GTTTGGTGTTACTTGCGCTGGAAGAAAGTGATTAAGTCCTACTGATAACCAATCCATAAT CTCCGCCGTTGATTTAATCTCATCCATTGTGTCTGGTCCGGCGATACTATATAACTGTTA TAATATCACATAGCCAAGAAATTTGATTTACAACCATATAAAATAAAATGTTAACATTTG ATATTA