Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G43710.1
CDS Infomation	\| Glycosyl hydrolase family 47 protein \| Chr5:17552252-17556523 REVERSE LENGTH=1875 \| 201606
Sequence	ATGGACTCAAATTTCAAGTGGCTTTTGTTTGCCATCTTGATCTCTCTGACATTTTCGGGT TTTGTTCTTCACCATGGAGTTCTCGCTGAAAGTGTTAAGCCTGATGAAGCTAAACAGCTT AGAGACGAGGTACGTGGGATGTTTTATCATGCCTTTGATGGATATATGAACAATGCGTTT CCACTCGATGAATTGAGACCGTTATCTTGCCAAGGAGAAGATACTCTTGGAGGCTATGCG TTGACTCTGATTGACTCGTTGGATACATTAGCTTTACTTGGTGACCGAGAGCGCTTCACT TCTTCTGTTGAATGGATTGGTAAAAATCTTCAGTTTAATATAAATAAAACAGTCTCTGTG TTTGAGACAACTATCCGAGTCCTTGGGGGGTTACTATCTGCTCATCTGATTGCAAGTGAT TATGCAACGGGCATGAGAATTCCATCTTACAACAATGAATTACTAGTTTTGGCTGAGAAT TTGGCACGGAGAATGCTTCCTGCATTTGATACACCGACTGGAATCCCATTTGGATCTGTG AATTTGATGTACGGTGTTGACAAACATGAAAGCAAGATAACATCAACTGCCGGTGGTGGT ACTTTGTCTTTAGAGTTTGGCGTGCTTAGTCGTTTAACAAATGATCCTGTTTTCGAACAA GTTGCAAAGAATGCGGTGAGGGGACTATGGGCACGTCGTTCAAATCTCGACTTGGTTGGT GCTCACATCAATGTCTTTACAGGTGAATGGACACAGAAGGATGCTGGTATAGGAACAAGC ATTGATTCCTTCTATGAGTATCTACTCAAGGCTTATATACTATTTGGGGATGAGGAATAT CTATACATTTTTCAAGAAGCTTATAGATCTGCAATGCAGTACCTTCACAAGGATCCTTGG TATGTAGAAGTCAATATGGATTCCGCAGCTATTGTCTGGCCAGTATTTAACAGCCTTCAA GCTTTCTGGCCAGGACTTCAGGTTTTAGCTGGAGACGTTGATCCAGCAATAAGAACTCAC ACTGCCTTCTTTAGCGTCTGGAAACGATATGGTTTCACCCCTGAGGGTTTTAATCTTGCT ACACTTAGTGTCCAGTATGGGCAAAAGAGTTATCCCTTAAGGCCGGAATTAATCGAGAGT ACATACTGGTTGTACAAAGCTACCAGAGATCCCAGGTATCTTGATGCAGGACGTGACTTT GTGGCTAGTTTGCAATACGGGGCAAAATGTCCTTGCGGTTATTGTCACATCACAGATGTA GAACTGCATAAACAAGAAGATCACATGGAGAGCTTCTTCCTCGCAGAAACGGTGAAGTAC TTATGGCTACTCTTTGACTTAGCTGTTGACTCGGATAACCTCGTAGACAATGGCCCTTAC AAGTACATCTTCAGTACTGAGGGTCATCTCTTACCAATAACACCACAAATATCTCTAGCT CGGGAACATTGCTCTTACTTTGGTGGATACTGTCCAAGCAATTCCACAAAACTAGAACAA GAAGTCCTTGGAGAAGACAGTAGTAACGATGATCACAGTAACGATTATCCTTACCACGAA TCTTTTCCAGTTACCGGTTTGATAAAGGGTTTATGTCCAGGACTAACACATGCTCAGAAA TATGGTTTTTCGTATGTTCTACCGGAGAAGACAGATCGTGAAGATGTTAATCAACCTAAA CCGGTAGTTACAAGCAGTTCAATTGTGTTAATCTCGGATCAAACAGTGGAGAAGAGACCA CAGGAAGAAGAAGGATTTACTTCTCAGTCTGAACCAATAATGACAATCTCTGGTGGTAGT AGCAACGACCAAACAGGTCAAGAGCTAACCTTGTTAGAGTCAGAAACTGATGATCAAAGA TCATACTCTTCTTAA

Peptide Sequence

PEP ID	AT5G43710.1
PEP Infomation	\| Glycosyl hydrolase family 47 protein \| Chr5:17552252-17556523 REVERSE LENGTH=624 \| 201606
Sequence	MDSNFKWLLFAILISLTFSGFVLHHGVLAESVKPDEAKQLRDEVRGMFYHAFDGYMNNAF PLDELRPLSCQGEDTLGGYALTLIDSLDTLALLGDRERFTSSVEWIGKNLQFNINKTVSV FETTIRVLGGLLSAHLIASDYATGMRIPSYNNELLVLAENLARRMLPAFDTPTGIPFGSV NLMYGVDKHESKITSTAGGGTLSLEFGVLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVG AHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYILFGDEEYLYIFQEAYRSAMQYLHKDPW YVEVNMDSAAIVWPVFNSLQAFWPGLQVLAGDVDPAIRTHTAFFSVWKRYGFTPEGFNLA TLSVQYGQKSYPLRPELIESTYWLYKATRDPRYLDAGRDFVASLQYGAKCPCGYCHITDV ELHKQEDHMESFFLAETVKYLWLLFDLAVDSDNLVDNGPYKYIFSTEGHLLPITPQISLA REHCSYFGGYCPSNSTKLEQEVLGEDSSNDDHSNDYPYHESFPVTGLIKGLCPGLTHAQK YGFSYVLPEKTDREDVNQPKPVVTSSSIVLISDQTVEKRPQEEEGFTSQSEPIMTISGGS SNDQTGQELTLLESETDDQRSYSS

Transcript Sequence

Transcript ID	AT5G43710.1
Transcript Infomation	\| Glycosyl hydrolase family 47 protein \| Chr5:17552130-17556730 REVERSE LENGTH=2204 \| 201606
Sequence	TGGCTGAAAAAACAAAAATAAAATAAAATAAATGTTAAGAAAAACCCAAAGATTTATTGA TTTGTTGAATTGTGATTGAAGGACGAGGCACCGAGTGACGCAGTTGAAAAACTCAAGAAT CTCCTCGGACAAGAGCAGAGATCCAGAGTGATGTCTGAGAAGATTCATTCAACACATTAA CGAAACTCCCCAAAATAGCTTTTATTGATGGACTCAAATTTCAAGTGGCTTTTGTTTGCC ATCTTGATCTCTCTGACATTTTCGGGTTTTGTTCTTCACCATGGAGTTCTCGCTGAAAGT GTTAAGCCTGATGAAGCTAAACAGCTTAGAGACGAGGTACGTGGGATGTTTTATCATGCC TTTGATGGATATATGAACAATGCGTTTCCACTCGATGAATTGAGACCGTTATCTTGCCAA GGAGAAGATACTCTTGGAGGCTATGCGTTGACTCTGATTGACTCGTTGGATACATTAGCT TTACTTGGTGACCGAGAGCGCTTCACTTCTTCTGTTGAATGGATTGGTAAAAATCTTCAG TTTAATATAAATAAAACAGTCTCTGTGTTTGAGACAACTATCCGAGTCCTTGGGGGGTTA CTATCTGCTCATCTGATTGCAAGTGATTATGCAACGGGCATGAGAATTCCATCTTACAAC AATGAATTACTAGTTTTGGCTGAGAATTTGGCACGGAGAATGCTTCCTGCATTTGATACA CCGACTGGAATCCCATTTGGATCTGTGAATTTGATGTACGGTGTTGACAAACATGAAAGC AAGATAACATCAACTGCCGGTGGTGGTACTTTGTCTTTAGAGTTTGGCGTGCTTAGTCGT TTAACAAATGATCCTGTTTTCGAACAAGTTGCAAAGAATGCGGTGAGGGGACTATGGGCA CGTCGTTCAAATCTCGACTTGGTTGGTGCTCACATCAATGTCTTTACAGGTGAATGGACA CAGAAGGATGCTGGTATAGGAACAAGCATTGATTCCTTCTATGAGTATCTACTCAAGGCT TATATACTATTTGGGGATGAGGAATATCTATACATTTTTCAAGAAGCTTATAGATCTGCA ATGCAGTACCTTCACAAGGATCCTTGGTATGTAGAAGTCAATATGGATTCCGCAGCTATT GTCTGGCCAGTATTTAACAGCCTTCAAGCTTTCTGGCCAGGACTTCAGGTTTTAGCTGGA GACGTTGATCCAGCAATAAGAACTCACACTGCCTTCTTTAGCGTCTGGAAACGATATGGT TTCACCCCTGAGGGTTTTAATCTTGCTACACTTAGTGTCCAGTATGGGCAAAAGAGTTAT CCCTTAAGGCCGGAATTAATCGAGAGTACATACTGGTTGTACAAAGCTACCAGAGATCCC AGGTATCTTGATGCAGGACGTGACTTTGTGGCTAGTTTGCAATACGGGGCAAAATGTCCT TGCGGTTATTGTCACATCACAGATGTAGAACTGCATAAACAAGAAGATCACATGGAGAGC TTCTTCCTCGCAGAAACGGTGAAGTACTTATGGCTACTCTTTGACTTAGCTGTTGACTCG GATAACCTCGTAGACAATGGCCCTTACAAGTACATCTTCAGTACTGAGGGTCATCTCTTA CCAATAACACCACAAATATCTCTAGCTCGGGAACATTGCTCTTACTTTGGTGGATACTGT CCAAGCAATTCCACAAAACTAGAACAAGAAGTCCTTGGAGAAGACAGTAGTAACGATGAT CACAGTAACGATTATCCTTACCACGAATCTTTTCCAGTTACCGGTTTGATAAAGGGTTTA TGTCCAGGACTAACACATGCTCAGAAATATGGTTTTTCGTATGTTCTACCGGAGAAGACA GATCGTGAAGATGTTAATCAACCTAAACCGGTAGTTACAAGCAGTTCAATTGTGTTAATC TCGGATCAAACAGTGGAGAAGAGACCACAGGAAGAAGAAGGATTTACTTCTCAGTCTGAA CCAATAATGACAATCTCTGGTGGTAGTAGCAACGACCAAACAGGTCAAGAGCTAACCTTG TTAGAGTCAGAAACTGATGATCAAAGATCATACTCTTCTTAAATCTCTCATTTATATATA TGTTCCACAGAAGAAGATTACAAAAACTTTTGTTAGAAATATAGATTCAGTTTTCCAATC TCATCAAGAATCTTGAATCCTTCTTTTGTTGATCGATTGTTGTC