Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G43530.1
CDS Infomation	\| Helicase protein with RING/U-box domain-containing protein \| Chr5:17489327-17494830 FORWARD LENGTH=3834 \| 201606
Sequence	ATGGCCATTGTTGATGACGCAGAGATGCGGTTAACCGAATCCGAAGCTGTTTCGAGTTCC GATGATCGTAAGATCGTTGCAGATACTCCCGATTTTATAGACGAATCCTCTCTAGTCATC AGAACAACCACTGGAGTCCGAATCTCAGCTCTACCGGCGGAGCAAAGCCTTGTTGACTCC GATGGATCTAACTCGGAGGTTACGCTTCCGGCGAAAGACGAGGTAATTAGTGATGGTTTT ACTTGTGTGAACAAAGAGATTGTAGAATCTGATTCATTTAGGGAGCAGAATCTAGAGATT GGAGAACCTGATTTAGATGTTGAGAATCGCAAAGAAGCGATGATTATTGATTCGATAGAA AATTCTGTGGTTGAAATTGTTTCAAGTGCTTCTGGTGATGATTGTAATGTTAAGGTAGAG GTAGTGGAACCTGAATTGCTTGTTGAGAATCTGGTGGTTGCTAAAGAAGAAGAAGAAATG ATTGTTGATTCTATAGAAGATTCTGTTGTTGAAATTGTTTCAACTGCTTCGGGTTGTGAT TGTAATGTGAAGGTTGAGGTAGTGGACCCTGAATTGTGTGTTGATAATCTGGTGGTTGTT AAAGAAGAAGAAATGATTGCTGATTCGATAGCGGAATCTGTGGTTGAAACTGTTTCGAGA GGTTTAGATTATGAGTGTGTTGATGTCAAGGTGAAAGAAGAACCTGATTTAGGTACAAAA TTGGAAGAAGATTCTGTTTTTCCGAATGTGCTTGAGAAGAAGGATGAGGTAATCAAAGTC CTGGAAGACCAGCCAAGTGAGATTAATAAGAAGCTAGAGCAAGAGAATGATGATCTCTTT TCGTCTGGAGATTCAGATGGTACATCAGCCAAGAGAAGGAAAATGGAGATGGAATCATAT GCACCAGTCGGTGTGGAAAGCTGTATCCTGGCGCCGACGCCTCTTCGAGTTGTGAAACCA GAGAAGTTGGATACCCCTGAAGTTATTGATCTGGAATCAGAGAAAAGTTATACTCATGTG AAGATGGAACCTGTTGAGGAAATAAAGGTGGAAGCTGTTAAGATGAGTTCTCAAGTGGAA GATGTGAAATTTAGCCGTGAGCAGAAATCTGTGTATGTGAAGAAGGAACCAGTTGGAGCA AGAAAGGTGAAAGTGGAAGATGGAGATTTTCCGGTGGAGAAAGATTGGTATTTGGTTGGG AGGTCACTTGTTACTGCTACTTCTACGAGTAAAGGAAGGAAATTAGAAGATAATGAGATT GTGAATTTCACATTTTCTTCTGTTGCAAAATGGAAAGTCCCAAACATTGTTCGTTTCTCT ACCAAAAGATGTGGAGAGATTGGTAGACTTCCGATGGAGTGGTCAAATTGGGCTGTGAGC CTTTTAAGATCTGGTAAGGTCAAGATGTTAGGCAGATGTGTAGCGGCGCCACCATTTCTT ACAATGATGCAAGAAATTATGCTATATGTCAGTTTTTACATTCACAGCTCGATATTCACT GATGTTAGCAAATCCACTTGGCGGATTGGTTCTTCCCCAAACCTTGAGTCCACCCTTCAT CCTCTTCTCCAGCTTTTCAAACACTTGACAATCAAACCTTATCAAAAGGCGGAGTTTACT CCTGAGGAACTCAACTCTCGTAAACGTTCACTGAATTTGGAGGATGACTATGATGAAAGA GCAGCATTGTTGGCCATAGCAAAAAGAAGAAAAGGTTGTCAACAGTCTCTGGAGCAGAAC AAAGATGAAGAAGAGGCTCCTGAGTCATATATGAATCGGGTTGTCGGCGCTGCCGATTCA TACAACCTTGAGGAAATGGAAGCTCCAAGTACACTCACGTGTAACCTGAGACCGTACCAG AAACAAGCTCTCTACTGGATGTCGGAATCTGAGAAAGGAATTGATGTTGAAAAGGCAGCT GAAACTCTACATCCTTGCTGGGAGGCTTATCGAATCTGTGACGAGAGGGCACCTTCTATT TATTTGAACATCTTTAGTGGTGAAGCAACAATCCAGTTTCCAACAGCAACGCAGATGGCA AGAGGCGGAATATTGGCAGATGCCATGGGACTTGGTAAAACTGTGATGACAATTGCACTA ATACTTGCACGGCCAGGCCGAGGTAACCCGGAAAATGAAGATGTCTTGGTGGCAGATGTT AATGCAGATAAACGCAATAGGAAGGAGATTCATATGGCACTAACGACTGTGAAGGCAAAA GGAGGCACTCTTATTATTTGTCCCATGGCATTGTTAAGCCAATGGAAGGACGAGCTTGAG ACTCATTCAAAGCCTGACACTGTGTCTGTGTTAGTTTACTATGGAGGGGATAGGACACAT GACGCGAAAGCAATAGCGAGTCATGATGTGGTTTTGACAACTTATGGTGTTTTAACCTCA GCTTACAAGCAGGATATGGCAAACAGTATTTTCCACAGGATTGATTGGTATAGGATTGTT CTTGATGAAGCTCACACGATCAAATCATGGAAAACTCAAGCTGCTAAAGCCACATTTGAG TTATCTTCACATTGCAGATGGTGTCTGACTGGGACTCCCTTACAAAACAAGCTCGAAGAT CTATACAGTCTTCTATGTTTCCTGCATGTTGAACCATGGTGCAATTGGGCTTGGTGGAGT AAGTTGATACAGAAGCCTTATGAAAATGGTGATCCACGAGGACTGAAGCTGATCAAGGCG ATTTTGAGGCCATTGATGCTGAGAAGAACAAAGGAAACAAGGGACAAAGAAGGAAGTCTA ATTCTTGAACTTCCTCCAACCGACGTCCAAGTCATTGAATGTGAACAATCTGAAGCAGAA CGTGACTTCTATACAGCCTTGTTCAAGAGATCCAAAGTCCAATTTGACCAGTTTGTGGCA CAAGGAAAAGTTCTTCACAACTATGCAAACATCCTCGAGCTCCTCCTCCGTCTACGCCAA TGTTGTAACCACCCTTTTCTAGTTATGAGCCGAGCAGATTCACAACAGTACGCTGACTTA GATAGCCTTGCAAGGAGGTTTCTTGATAACAACCCTGACTCTGTTTCCCAAAATGCTCCT TCTCGGGCATATATCGAAGAAGTTATCCAAGATTTACGCGATGGCAATAGCAAAGAATGT CCAATATGTCTGGAGTCTGCAGATGATCCCGTTCTCACACCTTGTGCTCACAGAATGTGC CGTGAATGTCTCCTTACTAGCTGGCGCTCTCCATCTTGTGGTCTATGCCCAATCTGCAGG ACAATCCTGAAGAGAACCGAACTTATCTCATGCCCGACAGATAGTATATTCCGTGTTGAT GTGGTAAAGAACTGGAAGGAGTCTTCAAAGGTTTCGGAGCTGCTCAAGTGCTTAGAGAAG ATCAAGAAATCTGGTTCGGGCGAGAAGAGCATTGTCTTTAGCCAGTGGACTTCATTTTTG GATCTTTTGGAGATTCCATTGCGAAGAAGAGGATTTGAGTTTCTTAGATTCGATGGGAAG CTGGCTCAGAAGGGAAGAGAAAAGGTTTTGAAAGAGTTCAATGAAACCAAACAGAAAACG ATTCTGCTTATGTCTCTGAAAGCTGGAGGAGTCGGTCTGAATCTAACTGCAGCTTCAAGT GTCTTCTTAATGGATCCATGGTGGAATCCAGCGGTGGAAGAGCAAGCGATCATGAGAATT CATCGAATAGGGCAGAAACGAACGGTATTCGTCAGAAGATTCATTGTCAAGGATACAGTG GAGGAACGGATGCAGCAAGTTCAGGCAAGGAAGCAGAGGATGATTGCCGGAGCTTTGACA GATGAAGAAGTCCGGTCTGCAAGACTTGAGGAGCTTAAAATGTTGTTCCGATGA

Peptide Sequence

PEP ID	AT5G43530.1
PEP Infomation	\| Helicase protein with RING/U-box domain-containing protein \| Chr5:17489327-17494830 FORWARD LENGTH=1277 \| 201606
Sequence	MAIVDDAEMRLTESEAVSSSDDRKIVADTPDFIDESSLVIRTTTGVRISALPAEQSLVDS DGSNSEVTLPAKDEVISDGFTCVNKEIVESDSFREQNLEIGEPDLDVENRKEAMIIDSIE NSVVEIVSSASGDDCNVKVEVVEPELLVENLVVAKEEEEMIVDSIEDSVVEIVSTASGCD CNVKVEVVDPELCVDNLVVVKEEEMIADSIAESVVETVSRGLDYECVDVKVKEEPDLGTK LEEDSVFPNVLEKKDEVIKVLEDQPSEINKKLEQENDDLFSSGDSDGTSAKRRKMEMESY APVGVESCILAPTPLRVVKPEKLDTPEVIDLESEKSYTHVKMEPVEEIKVEAVKMSSQVE DVKFSREQKSVYVKKEPVGARKVKVEDGDFPVEKDWYLVGRSLVTATSTSKGRKLEDNEI VNFTFSSVAKWKVPNIVRFSTKRCGEIGRLPMEWSNWAVSLLRSGKVKMLGRCVAAPPFL TMMQEIMLYVSFYIHSSIFTDVSKSTWRIGSSPNLESTLHPLLQLFKHLTIKPYQKAEFT PEELNSRKRSLNLEDDYDERAALLAIAKRRKGCQQSLEQNKDEEEAPESYMNRVVGAADS YNLEEMEAPSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSI YLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADV NADKRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTH DAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFE LSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKA ILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVA QGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAP SRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICR TILKRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFL DLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASS VFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGALT DEEVRSARLEELKMLFR

Transcript Sequence

Transcript ID	AT5G43530.1
Transcript Infomation	\| Helicase protein with RING/U-box domain-containing protein \| Chr5:17489271-17495024 FORWARD LENGTH=4084 \| 201606
Sequence	CCCCACTCTCATCCTCCATTTTCGCCTCTCTCTTCCCTCTCCTCCTTTCTTCCCAAATGG CCATTGTTGATGACGCAGAGATGCGGTTAACCGAATCCGAAGCTGTTTCGAGTTCCGATG ATCGTAAGATCGTTGCAGATACTCCCGATTTTATAGACGAATCCTCTCTAGTCATCAGAA CAACCACTGGAGTCCGAATCTCAGCTCTACCGGCGGAGCAAAGCCTTGTTGACTCCGATG GATCTAACTCGGAGGTTACGCTTCCGGCGAAAGACGAGGTAATTAGTGATGGTTTTACTT GTGTGAACAAAGAGATTGTAGAATCTGATTCATTTAGGGAGCAGAATCTAGAGATTGGAG AACCTGATTTAGATGTTGAGAATCGCAAAGAAGCGATGATTATTGATTCGATAGAAAATT CTGTGGTTGAAATTGTTTCAAGTGCTTCTGGTGATGATTGTAATGTTAAGGTAGAGGTAG TGGAACCTGAATTGCTTGTTGAGAATCTGGTGGTTGCTAAAGAAGAAGAAGAAATGATTG TTGATTCTATAGAAGATTCTGTTGTTGAAATTGTTTCAACTGCTTCGGGTTGTGATTGTA ATGTGAAGGTTGAGGTAGTGGACCCTGAATTGTGTGTTGATAATCTGGTGGTTGTTAAAG AAGAAGAAATGATTGCTGATTCGATAGCGGAATCTGTGGTTGAAACTGTTTCGAGAGGTT TAGATTATGAGTGTGTTGATGTCAAGGTGAAAGAAGAACCTGATTTAGGTACAAAATTGG AAGAAGATTCTGTTTTTCCGAATGTGCTTGAGAAGAAGGATGAGGTAATCAAAGTCCTGG AAGACCAGCCAAGTGAGATTAATAAGAAGCTAGAGCAAGAGAATGATGATCTCTTTTCGT CTGGAGATTCAGATGGTACATCAGCCAAGAGAAGGAAAATGGAGATGGAATCATATGCAC CAGTCGGTGTGGAAAGCTGTATCCTGGCGCCGACGCCTCTTCGAGTTGTGAAACCAGAGA AGTTGGATACCCCTGAAGTTATTGATCTGGAATCAGAGAAAAGTTATACTCATGTGAAGA TGGAACCTGTTGAGGAAATAAAGGTGGAAGCTGTTAAGATGAGTTCTCAAGTGGAAGATG TGAAATTTAGCCGTGAGCAGAAATCTGTGTATGTGAAGAAGGAACCAGTTGGAGCAAGAA AGGTGAAAGTGGAAGATGGAGATTTTCCGGTGGAGAAAGATTGGTATTTGGTTGGGAGGT CACTTGTTACTGCTACTTCTACGAGTAAAGGAAGGAAATTAGAAGATAATGAGATTGTGA ATTTCACATTTTCTTCTGTTGCAAAATGGAAAGTCCCAAACATTGTTCGTTTCTCTACCA AAAGATGTGGAGAGATTGGTAGACTTCCGATGGAGTGGTCAAATTGGGCTGTGAGCCTTT TAAGATCTGGTAAGGTCAAGATGTTAGGCAGATGTGTAGCGGCGCCACCATTTCTTACAA TGATGCAAGAAATTATGCTATATGTCAGTTTTTACATTCACAGCTCGATATTCACTGATG TTAGCAAATCCACTTGGCGGATTGGTTCTTCCCCAAACCTTGAGTCCACCCTTCATCCTC TTCTCCAGCTTTTCAAACACTTGACAATCAAACCTTATCAAAAGGCGGAGTTTACTCCTG AGGAACTCAACTCTCGTAAACGTTCACTGAATTTGGAGGATGACTATGATGAAAGAGCAG CATTGTTGGCCATAGCAAAAAGAAGAAAAGGTTGTCAACAGTCTCTGGAGCAGAACAAAG ATGAAGAAGAGGCTCCTGAGTCATATATGAATCGGGTTGTCGGCGCTGCCGATTCATACA ACCTTGAGGAAATGGAAGCTCCAAGTACACTCACGTGTAACCTGAGACCGTACCAGAAAC AAGCTCTCTACTGGATGTCGGAATCTGAGAAAGGAATTGATGTTGAAAAGGCAGCTGAAA CTCTACATCCTTGCTGGGAGGCTTATCGAATCTGTGACGAGAGGGCACCTTCTATTTATT TGAACATCTTTAGTGGTGAAGCAACAATCCAGTTTCCAACAGCAACGCAGATGGCAAGAG GCGGAATATTGGCAGATGCCATGGGACTTGGTAAAACTGTGATGACAATTGCACTAATAC TTGCACGGCCAGGCCGAGGTAACCCGGAAAATGAAGATGTCTTGGTGGCAGATGTTAATG CAGATAAACGCAATAGGAAGGAGATTCATATGGCACTAACGACTGTGAAGGCAAAAGGAG GCACTCTTATTATTTGTCCCATGGCATTGTTAAGCCAATGGAAGGACGAGCTTGAGACTC ATTCAAAGCCTGACACTGTGTCTGTGTTAGTTTACTATGGAGGGGATAGGACACATGACG CGAAAGCAATAGCGAGTCATGATGTGGTTTTGACAACTTATGGTGTTTTAACCTCAGCTT ACAAGCAGGATATGGCAAACAGTATTTTCCACAGGATTGATTGGTATAGGATTGTTCTTG ATGAAGCTCACACGATCAAATCATGGAAAACTCAAGCTGCTAAAGCCACATTTGAGTTAT CTTCACATTGCAGATGGTGTCTGACTGGGACTCCCTTACAAAACAAGCTCGAAGATCTAT ACAGTCTTCTATGTTTCCTGCATGTTGAACCATGGTGCAATTGGGCTTGGTGGAGTAAGT TGATACAGAAGCCTTATGAAAATGGTGATCCACGAGGACTGAAGCTGATCAAGGCGATTT TGAGGCCATTGATGCTGAGAAGAACAAAGGAAACAAGGGACAAAGAAGGAAGTCTAATTC TTGAACTTCCTCCAACCGACGTCCAAGTCATTGAATGTGAACAATCTGAAGCAGAACGTG ACTTCTATACAGCCTTGTTCAAGAGATCCAAAGTCCAATTTGACCAGTTTGTGGCACAAG GAAAAGTTCTTCACAACTATGCAAACATCCTCGAGCTCCTCCTCCGTCTACGCCAATGTT GTAACCACCCTTTTCTAGTTATGAGCCGAGCAGATTCACAACAGTACGCTGACTTAGATA GCCTTGCAAGGAGGTTTCTTGATAACAACCCTGACTCTGTTTCCCAAAATGCTCCTTCTC GGGCATATATCGAAGAAGTTATCCAAGATTTACGCGATGGCAATAGCAAAGAATGTCCAA TATGTCTGGAGTCTGCAGATGATCCCGTTCTCACACCTTGTGCTCACAGAATGTGCCGTG AATGTCTCCTTACTAGCTGGCGCTCTCCATCTTGTGGTCTATGCCCAATCTGCAGGACAA TCCTGAAGAGAACCGAACTTATCTCATGCCCGACAGATAGTATATTCCGTGTTGATGTGG TAAAGAACTGGAAGGAGTCTTCAAAGGTTTCGGAGCTGCTCAAGTGCTTAGAGAAGATCA AGAAATCTGGTTCGGGCGAGAAGAGCATTGTCTTTAGCCAGTGGACTTCATTTTTGGATC TTTTGGAGATTCCATTGCGAAGAAGAGGATTTGAGTTTCTTAGATTCGATGGGAAGCTGG CTCAGAAGGGAAGAGAAAAGGTTTTGAAAGAGTTCAATGAAACCAAACAGAAAACGATTC TGCTTATGTCTCTGAAAGCTGGAGGAGTCGGTCTGAATCTAACTGCAGCTTCAAGTGTCT TCTTAATGGATCCATGGTGGAATCCAGCGGTGGAAGAGCAAGCGATCATGAGAATTCATC GAATAGGGCAGAAACGAACGGTATTCGTCAGAAGATTCATTGTCAAGGATACAGTGGAGG AACGGATGCAGCAAGTTCAGGCAAGGAAGCAGAGGATGATTGCCGGAGCTTTGACAGATG AAGAAGTCCGGTCTGCAAGACTTGAGGAGCTTAAAATGTTGTTCCGATGAGAGACTTGGA GAAAGTCTTCTTTTTAATCGTCTTTTGAAGTTAGAGAGTCTTCTTTTTGTTTTTTTTCAT GTAAATATTGGTACAAGTTATTTATCTTTCTCCCCTAATGAGTTATAAGTAATTTTGAAC ACTGATTGTCTCGATCCACATATTGTGTATATGAACAGTTGAACGTGGATTATGTAATTT TGAA