Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G43175.1
CDS Infomation

| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:17334261-17335234 FORWARD LENGTH=672 | 201606
Sequence

ATGGAGAATGAAGCTTTTGTAGATGGTGAATTGGAGTCTCTTTTGGGGATGTTCAACTTT
GATCAATGTTCATCTAACGAATCGAGCTTTTGCAATGCTCCAAATGAGACTGATGTTTTC
TCTTCTGATGATTTCTTCCCATTTGGTACAATTCTGCAAAGTAACTATGCGGCCGTTCTT
GATGGTTCCAACCACCAAACGAACCGAAATGTCGACTCAAGACAAGATCTGTTGAAACCA
AGGAAGAAGCAAAAGTTAAGCTCGGAAAGCAATTTGGTTACCGAGCCTAAGACTGCTTGG
AGAGATGGTCAAAGCCTAAGCAGTTATAATAGTTCAGATGATGAAAAGGCTTTAGGTTTA
GTGTCTAATACATCAAAAAGCCTAAAACGCAAAGCGAAAGCCAACAGAGGGATAGCTTCC
GATCCTCAGAGCCTATACGCTAGGAAACGAAGAGAAAGGATAAACGATAGGCTAAAGACA
TTGCAGAGCCTAGTTCCTAATGGGACAAAGGTCGATATAAGCACAATGCTGGAAGATGCT
GTCCATTACGTGAAGTTCCTGCAGCTTCAAATCAAGCTCTTGAGTTCAGAAGATCTATGG
ATGTATGCACCTCTTGCTCACAATGGTCTGAATATGGGACTACATCACAATCTTTTGTCT
CGGCTTATTTAA

Peptide Sequence

PEP ID

AT5G43175.1
PEP Infomation

| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:17334261-17335234 FORWARD LENGTH=223 | 201606
Sequence

MENEAFVDGELESLLGMFNFDQCSSNESSFCNAPNETDVFSSDDFFPFGTILQSNYAAVL
DGSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGL
VSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDA
VHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSRLI

Transcript Sequence

Transcript ID

AT5G43175.1
Transcript Infomation

| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:17334121-17335234 FORWARD LENGTH=812 | 201606
Sequence

AATGAGATTTTAAAACCCTGATTTTATAATCAGCCATCAAATATTTATATTCCTTCTCAA
AGTTATTCTCCTCATGTCTCTAATATAAGCTTGAACGTTGCTATATATAAATGTAAAGGC
GAACGCATAAGAAAAGAAAAATGGAGAATGAAGCTTTTGTAGATGGTGAATTGGAGTCTC
TTTTGGGGATGTTCAACTTTGATCAATGTTCATCTAACGAATCGAGCTTTTGCAATGCTC
CAAATGAGACTGATGTTTTCTCTTCTGATGATTTCTTCCCATTTGGTACAATTCTGCAAA
GTAACTATGCGGCCGTTCTTGATGGTTCCAACCACCAAACGAACCGAAATGTCGACTCAA
GACAAGATCTGTTGAAACCAAGGAAGAAGCAAAAGTTAAGCTCGGAAAGCAATTTGGTTA
CCGAGCCTAAGACTGCTTGGAGAGATGGTCAAAGCCTAAGCAGTTATAATAGTTCAGATG
ATGAAAAGGCTTTAGGTTTAGTGTCTAATACATCAAAAAGCCTAAAACGCAAAGCGAAAG
CCAACAGAGGGATAGCTTCCGATCCTCAGAGCCTATACGCTAGGAAACGAAGAGAAAGGA
TAAACGATAGGCTAAAGACATTGCAGAGCCTAGTTCCTAATGGGACAAAGGTCGATATAA
GCACAATGCTGGAAGATGCTGTCCATTACGTGAAGTTCCTGCAGCTTCAAATCAAGCTCT
TGAGTTCAGAAGATCTATGGATGTATGCACCTCTTGCTCACAATGGTCTGAATATGGGAC
TACATCACAATCTTTTGTCTCGGCTTATTTAA