Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G43100.1
CDS Infomation	\| Eukaryotic aspartyl protease family protein \| Chr5:17299264-17302718 FORWARD LENGTH=1896 \| 201606
Sequence	ATGGATCGATCTTCCCTCCTCCTTCTCCTCTTTACCACCACCACCATCTCTATATTCTTC TTCGATCTAACCACCGCCGATGAATCGCCGATGATTTTCCCTCTTAGCTACTCTTCCTTA CCACCGCGACCGCGAGTCGAGGATTTTCGCCGCCGTCGCCTTCATCAATCTCAGCTCCCT AACGCTCACATGAAACTCTACGATGACCTCCTCTCCAACGGCTACTACACTACACGATTA TGGATTGGAACACCACCACAAGAGTTTGCTTTGATTGTTGATACTGGAAGTACTGTTACT TACGTTCCTTGCTCTACTTGTAAACAGTGTGGGAAGCATCAGGATCCAAAGTTTCAACCA GAGTTATCTACTAGTTACCAAGCTTTGAAGTGTAATCCTGATTGTAATTGTGATGATGAG GGGAAATTATGTGTCTACGAAAGAAGGTATGCGGAGATGAGTTCGAGTAGCGGGGTTTTG AGTGAGGATTTGATATCTTTTGGTAATGAGAGTCAACTTTCTCCGCAACGAGCTGTTTTC GGATGTGAGAATGAGGAGACTGGTGATCTTTTTAGCCAACGTGCTGATGGTATAATGGGG TTAGGTCGTGGTAAGCTTAGCGTTGTAGATCAGCTTGTCGATAAGGGTGTTATCGAGGAT GTTTTTTCCTTGTGTTATGGAGGAATGGAAGTTGGTGGTGGTGCTATGGTTCTTGGTAAA ATATCTCCTCCACCTGGAATGGTGTTTTCTCATTCTGATCCTTTCCGCAGTCCGTATTAC AACATTGACCTGAAACAAATGCATGTTGCTGGAAAGTCTCTAAAGCTAAACCCAAAGGTC TTCAATGGAAAGCATGGAACCGTCTTGGATAGTGGAACAACATATGCTTATTTTCCCAAG GAAGCATTTATTGCCATTAAGGATGCGGTCATTAAGGAAATTCCATCTCTCAAACGGATC CATGGTCCAGACCCAAATTATGATGATGTTTGTTTCTCTGGCGCTGGAAGGGATGTGGCT GAGATACACAATTTTTTTCCTGAGATTGCTATGGAATTTGGAAATGGTCAGAAACTGATT CTTTCTCCCGAGAACTACTTATTCAGGCACACTAAAGTTAGAGGCGCATACTGCCTTGGA ATCTTTCCTGATAGGGATTCAACAACACTCCTAGGAGGAATTGTTGTTCGCAATACTCTT GTCACCTATGATCGTGAGAATGATAAGCTCGGGTTTCTGAAGACCAACTGTTCTGATATA TGGAGGAGGCTGGCGGCACCAGAATCTCCTGCACCTACTTCACCAATATCCCAAAATAAA AGTTCTAACATTTCTCCAAGCCCTGCTACAAGCGAGTCTCCTACCTCTCATCTTCCAGGT GTTTTCCGGGTTGGAGTTATTACCTTCGAAGTATCAATTAGTGTGAACAATTCTTCATTG AAGCCCAAGTTCTCAGAGATCGCTGATTTCATTGCCCATGAGTTAGACATTCAAAGTGCA CAGGTTCGCTTGCTGAATTTCTCGTCTAGTGGAAATGAGTATCGCCTGAAATGGGGAGTC TTTCCCCCACAATCTTCCGAGTACATTTCCAACACTACGGCATTGAACATAATGTTGCTT CTGAAAGAAAACCGGTTACGCCTACCTGGACAATTTGGAAGCTACAAGTTGCTAGAATGG AAAGCTGAGCAAAAGAAGAAACAGAGCTGGTGGGAGAAACACTTACTTGGTGTGGTGGGA GGAGCGATGATATCGTTGCTTGTTACTTCGGTGATGATCAAACTTGCATTGGTGTGGAGA CGGCGAAAGCAAGAAGAAGCTACTTATGAGCCTGTAAATGCTGCTATTAAAGAACAAGAA CTTCAGCCTCTCTCCTCTGAAACATCTAATGCCTGA

Peptide Sequence

PEP ID	AT5G43100.1
PEP Infomation	\| Eukaryotic aspartyl protease family protein \| Chr5:17299264-17302718 FORWARD LENGTH=631 \| 201606
Sequence	MDRSSLLLLLFTTTTISIFFFDLTTADESPMIFPLSYSSLPPRPRVEDFRRRRLHQSQLP NAHMKLYDDLLSNGYYTTRLWIGTPPQEFALIVDTGSTVTYVPCSTCKQCGKHQDPKFQP ELSTSYQALKCNPDCNCDDEGKLCVYERRYAEMSSSSGVLSEDLISFGNESQLSPQRAVF GCENEETGDLFSQRADGIMGLGRGKLSVVDQLVDKGVIEDVFSLCYGGMEVGGGAMVLGK ISPPPGMVFSHSDPFRSPYYNIDLKQMHVAGKSLKLNPKVFNGKHGTVLDSGTTYAYFPK EAFIAIKDAVIKEIPSLKRIHGPDPNYDDVCFSGAGRDVAEIHNFFPEIAMEFGNGQKLI LSPENYLFRHTKVRGAYCLGIFPDRDSTTLLGGIVVRNTLVTYDRENDKLGFLKTNCSDI WRRLAAPESPAPTSPISQNKSSNISPSPATSESPTSHLPGVFRVGVITFEVSISVNNSSL KPKFSEIADFIAHELDIQSAQVRLLNFSSSGNEYRLKWGVFPPQSSEYISNTTALNIMLL LKENRLRLPGQFGSYKLLEWKAEQKKKQSWWEKHLLGVVGGAMISLLVTSVMIKLALVWR RRKQEEATYEPVNAAIKEQELQPLSSETSNA

Transcript Sequence

Transcript ID	AT5G43100.1
Transcript Infomation	\| Eukaryotic aspartyl protease family protein \| Chr5:17298814-17303058 FORWARD LENGTH=2686 \| 201606
Sequence	TTTATAATTCGCAAAAAGATTTAGAATTCTAGAAATTAGGCATAACTAACTCACGACAAT GGCTTCCACAATCTGCATATCATAATCCACCTTTTTCCGTTTTTTTCCATAATTACTTTG TTTGATGTGTTTAATCCGCACCGTTTCTCAATTTGCCGGTCTCCCACTCACATACCTACC TTTATCAGACATGGTAAGAAGAGTTATGATTCGTTGACTTCACAAGACTTGTTCAAACAG ACACGTGGCACTACATTATTCGTTATTCTAACCAAAAAAAATATTGAATCATGAAACCAC CGTGAGAGACAAATTCCATTCACTCTCTCTCTCTCTCTCTTCCTTTCTTCTCATTTTTCA AGGACGACGGAGCCACGGTGGAGTTGACTCCGCTTAAACCCCCTCCGTCGCCACCGGCGT TCTTCAATTTCAAACCCCAATCCACCACCCATGGATCGATCTTCCCTCCTCCTTCTCCTC TTTACCACCACCACCATCTCTATATTCTTCTTCGATCTAACCACCGCCGATGAATCGCCG ATGATTTTCCCTCTTAGCTACTCTTCCTTACCACCGCGACCGCGAGTCGAGGATTTTCGC CGCCGTCGCCTTCATCAATCTCAGCTCCCTAACGCTCACATGAAACTCTACGATGACCTC CTCTCCAACGGCTACTACACTACACGATTATGGATTGGAACACCACCACAAGAGTTTGCT TTGATTGTTGATACTGGAAGTACTGTTACTTACGTTCCTTGCTCTACTTGTAAACAGTGT GGGAAGCATCAGGATCCAAAGTTTCAACCAGAGTTATCTACTAGTTACCAAGCTTTGAAG TGTAATCCTGATTGTAATTGTGATGATGAGGGGAAATTATGTGTCTACGAAAGAAGGTAT GCGGAGATGAGTTCGAGTAGCGGGGTTTTGAGTGAGGATTTGATATCTTTTGGTAATGAG AGTCAACTTTCTCCGCAACGAGCTGTTTTCGGATGTGAGAATGAGGAGACTGGTGATCTT TTTAGCCAACGTGCTGATGGTATAATGGGGTTAGGTCGTGGTAAGCTTAGCGTTGTAGAT CAGCTTGTCGATAAGGGTGTTATCGAGGATGTTTTTTCCTTGTGTTATGGAGGAATGGAA GTTGGTGGTGGTGCTATGGTTCTTGGTAAAATATCTCCTCCACCTGGAATGGTGTTTTCT CATTCTGATCCTTTCCGCAGTCCGTATTACAACATTGACCTGAAACAAATGCATGTTGCT GGAAAGTCTCTAAAGCTAAACCCAAAGGTCTTCAATGGAAAGCATGGAACCGTCTTGGAT AGTGGAACAACATATGCTTATTTTCCCAAGGAAGCATTTATTGCCATTAAGGATGCGGTC ATTAAGGAAATTCCATCTCTCAAACGGATCCATGGTCCAGACCCAAATTATGATGATGTT TGTTTCTCTGGCGCTGGAAGGGATGTGGCTGAGATACACAATTTTTTTCCTGAGATTGCT ATGGAATTTGGAAATGGTCAGAAACTGATTCTTTCTCCCGAGAACTACTTATTCAGGCAC ACTAAAGTTAGAGGCGCATACTGCCTTGGAATCTTTCCTGATAGGGATTCAACAACACTC CTAGGAGGAATTGTTGTTCGCAATACTCTTGTCACCTATGATCGTGAGAATGATAAGCTC GGGTTTCTGAAGACCAACTGTTCTGATATATGGAGGAGGCTGGCGGCACCAGAATCTCCT GCACCTACTTCACCAATATCCCAAAATAAAAGTTCTAACATTTCTCCAAGCCCTGCTACA AGCGAGTCTCCTACCTCTCATCTTCCAGGTGTTTTCCGGGTTGGAGTTATTACCTTCGAA GTATCAATTAGTGTGAACAATTCTTCATTGAAGCCCAAGTTCTCAGAGATCGCTGATTTC ATTGCCCATGAGTTAGACATTCAAAGTGCACAGGTTCGCTTGCTGAATTTCTCGTCTAGT GGAAATGAGTATCGCCTGAAATGGGGAGTCTTTCCCCCACAATCTTCCGAGTACATTTCC AACACTACGGCATTGAACATAATGTTGCTTCTGAAAGAAAACCGGTTACGCCTACCTGGA CAATTTGGAAGCTACAAGTTGCTAGAATGGAAAGCTGAGCAAAAGAAGAAACAGAGCTGG TGGGAGAAACACTTACTTGGTGTGGTGGGAGGAGCGATGATATCGTTGCTTGTTACTTCG GTGATGATCAAACTTGCATTGGTGTGGAGACGGCGAAAGCAAGAAGAAGCTACTTATGAG CCTGTAAATGCTGCTATTAAAGAACAAGAACTTCAGCCTCTCTCCTCTGAAACATCTAAT GCCTGAGCCTCCTCATCACTCATAGAGTCTCTTTACGGTCTCTCGCTCTTTATATATATT TATATATTTGATAGAAAGAAAATGAAACCCCAGAACACAGGAAACAAGATTCCTCAAATT AAAAACACTTTTGATTTCAAGTAAATTGATGTAGTTATTACGCTATTTTGATGTACAAGG AAAGAAAGAAAATAGAGAGAAAAATGGTTGGAATGTATTTGGAAGGCTTATTGGCGTGAG GGTTTAATTTGGTTTGTGAGAGATATGTGTTTAAGTGATATTTTATGATTTTATTGAGAA ATTAAATTTAGTGAATTTAAGTGATATTTTATGATTTTTAGTTGTT