Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G42790.1
CDS Infomation	\| proteasome alpha subunit F1 \| Chr5:17159270-17160975 REVERSE LENGTH=837 \| 201606
Sequence	ATGTTCAGAAACCAATACGACACAGATGTTACGACATGGAGTCCAACAGGTCGTTTATTC CAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGATCTGCAGCAATTGGACTCAGATCT CGTTCTCATGTCGTTCTCGCTTGTGTTAACAAAGCTCAATCGGAGCTTTCTTCGCATCAG AGGAAGATCTTTAAAGTCGATGACCATATCGGTGTTGCAATCGCTGGTCTCACAGCCGAC GGTCGTGTATTGTCTCGGTATATGAGATCGGAATCGATTAATCACTCTTTTACTTATGAG TCTCCTCTTCCTGTTGGTCGTCTCGTTGTTCATCTTGCTGATAAAGCTCAGGTCTGTACC CAACGATCATGGAAACGACCCTATGGTGTTGGTTTGCTGGTAGGTGGATTGGATGAGTCT GGAGCCCACCTTTACTACAACTGTCCCAGCGGAAACTACTTCGAGTACCAAGCTTTTGCT ATTGGATCCCGTTCCCAAGCAGCAAAGACCTATCTGGAACGCAGGTTTGAGAGCTTTGGG GATTCTTCTAGAGAAGATCTGATCAAAGATGCTATTTTGGCTGTTAGGGAGACATTGCAA GGGGAAACACTGAAGAGTTCTCTCTGCACAGTCGCTATTCTAGGAGTCGATGAACCGTTC CACTTCCTGGACCAGGAAGCAATACAGAAAGTGATCGACACATTTGAGAAAGTGCCAGAG GAAGAGGAAGGAGAAGGCGAGGCTGGTGAGGGTGAGGCCGAAGCTGCCGAGGCTGCACCA GCAGAACGAGGTGGTGGTGTTGCAGGTGACCAAGACGTGGCTCCAATGGAAATGTAA

Peptide Sequence

PEP ID	AT5G42790.1
PEP Infomation	\| proteasome alpha subunit F1 \| Chr5:17159270-17160975 REVERSE LENGTH=278 \| 201606
Sequence	MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE EEEGEGEAGEGEAEAAEAAPAERGGGVAGDQDVAPMEM

Transcript Sequence

Transcript ID	AT5G42790.1
Transcript Infomation	\| proteasome alpha subunit F1 \| Chr5:17159044-17161156 REVERSE LENGTH=1244 \| 201606
Sequence	GCCCAATAAGCTAGATACCGAGCCAATACAAAGCCCAGAATTTAATAGAAGCCCATTAAA TCGAGAGAGAGATCGAGAGCATCCATGGCTTGAAGGAAAAGAAAAGTTTTGTTTCTGAAC TTTCGTCTCTATAAACCCTTTCGACGACGAGTGAAGAAGAAAGCGAGACGAAGAAGCAAA GATGTTCAGAAACCAATACGACACAGATGTTACGACATGGAGTCCAACAGGTCGTTTATT CCAAGTGGAATACGCCATGGAAGCAGTGAAGCAAGGATCTGCAGCAATTGGACTCAGATC TCGTTCTCATGTCGTTCTCGCTTGTGTTAACAAAGCTCAATCGGAGCTTTCTTCGCATCA GAGGAAGATCTTTAAAGTCGATGACCATATCGGTGTTGCAATCGCTGGTCTCACAGCCGA CGGTCGTGTATTGTCTCGGTATATGAGATCGGAATCGATTAATCACTCTTTTACTTATGA GTCTCCTCTTCCTGTTGGTCGTCTCGTTGTTCATCTTGCTGATAAAGCTCAGGTCTGTAC CCAACGATCATGGAAACGACCCTATGGTGTTGGTTTGCTGGTAGGTGGATTGGATGAGTC TGGAGCCCACCTTTACTACAACTGTCCCAGCGGAAACTACTTCGAGTACCAAGCTTTTGC TATTGGATCCCGTTCCCAAGCAGCAAAGACCTATCTGGAACGCAGGTTTGAGAGCTTTGG GGATTCTTCTAGAGAAGATCTGATCAAAGATGCTATTTTGGCTGTTAGGGAGACATTGCA AGGGGAAACACTGAAGAGTTCTCTCTGCACAGTCGCTATTCTAGGAGTCGATGAACCGTT CCACTTCCTGGACCAGGAAGCAATACAGAAAGTGATCGACACATTTGAGAAAGTGCCAGA GGAAGAGGAAGGAGAAGGCGAGGCTGGTGAGGGTGAGGCCGAAGCTGCCGAGGCTGCACC AGCAGAACGAGGTGGTGGTGTTGCAGGTGACCAAGACGTGGCTCCAATGGAAATGTAAGG CTTGTGTGTGTAACGCTGGAACTATTTTATTTCGATGTTAGTTGGATTTTTACTTTGCAA AATGGCTGCGGGTTTAGATTATATGCTTGAGAAGTTGAAACCATTTCGTCATTTAAACTC AATAGCTGCCATCAAGACTTTCTCGTATTCTGGTCTTTTGGTTTAAATCTGAAATCTGTT CACGACTTCCTATCTCTTTGGTTCTGCAATTCCTTGCTAAAAAA