Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G41360.1
CDS Infomation	\| homolog of Xeroderma pigmentosum complementation group B 2 \| Chr5:16544574-16549121 FORWARD LENGTH=2301 \| 201606
Sequence	ATGGGAAACGATGAAAGAAAACGACCTACAAAGAAGATGAAGTACGGTGGGAAGGATGAT CAAAAGATGAAGAACATACAAAACGTTGAAGATTACTATGATGATGCTGATGAGGATTCT CGTGATGGTGAAGGAGAGGAGAAGAGGAGAGATTTTACTGATTTGGAGTTGAAGCCGGAT CATGGAAATAGGCCTTTGTGGGCTTGTGCTGATGGAAAGATTTTCTTGGAGACATTTTCT CCTCTCTATAAACAAGCTTATGACTTTCTTATCGCCATTGCTGAACCCGTTTGCAGGCCT GAGTCAATGCACGAGTATAATTTAACCCCACACTCGTTGTATGCTGCTGTTTCCGTTGGT CTTGAGACAGAAACTATCATCTCTGTTTTGAATAAGCTATCTAAGACCAAGCTACCCGGG GAGATCATTGATTTCATCCATGCTTCTACTGCTAATTATGGGAAAGTGAAGTTGGTATTG AAGAAAAATCGGTATTTTATTGAATCACCATTCCCGGAGGTGTTGAAAAGGCTTCTCAGT GATGATGTCATAAATCGAGCAAGATTTACTTCTGAGCCATATTATGGTGGTGATGGATTT ACGATCGGCAAAACAAGTGGTGAACTTGAAGCAGGACCTGGGGAGTTGTTGAATGAAGCA GAATTGGCAGCAGCAGCAGAAGAGAAAGAAACTCACTCATTTGAGATAGACCCTGCACTG GTGGAGAATGTTAAGCAGCGTTGCTTGCCAAATGCCTTGAATTACCCTATGTTAGAGGAA TATGACTTCAGGAACGATAATGTTAATCCTGATCTTGACATGGAACTGAAGCCCCATGCA CAACCAAGGCCATACCAGGAAAAAAGTTTGAGCAAAATGTTTGGAAACGGACGAGCAAGA TCTGGGATTATAGTGTTACCTTGTGGAGCTGGTAAATCTCTAGTTGGTGTTTCTGCAGCG GCTCGTATAAAGAAGAGTTGTCTTTGTTTGGCAACGAATGCTGTCTCGGTGGATCAATGG GCCTACCAATTTAAGTTGTGGTCTACTATAAAAGATGACCAAATATGCCGTTTCACTTCT GATAGTAAAGAACGATTCCGTGGAAATGCTGGTGTTGTTGTGACAACCTATAATATGATT GCCTTTGGTGGTAAACGATCTGAAGAAGCAGAGAAGATTATAGAAGAAATGAGAAACAGA GAGTGGGGGTTGCTGCTTATGGACGAGGTGCATGTGGTTCCAGCCCATATGTTTAGGAAA GTTATCAGTATTACAAAATCTCACTGCAAGCTAGGACTTACAGCCACCCTTGTGAGAGAA GACGAAAAAATTACAGATTTAAACTTCCTCATTGGCCCGAAACTCTATGAAGCCAATTGG CTAGATTTAGTTAAAGGAGGCTTTATTGCAAATGTTCAGTGTGCTGAAGTATGGTGTCCC ATGACCAAAGAGTTTTTTGCAGAATATCTGAAGAAAGAGAACTCGAAAAAAAAACAGGCG CTTTATGTCATGAACCCTAACAAGTTCAGAGCCTGTGAATTTTTGATACGTTTCCATGAA CAACAACGTGGGGATAAAATCATCGTCTTTGCAGACAATCTTTTTGCACTTACAGAGTAT GCAATGAAACTCCGGAAACCGATGATTTACGGTGCAACCAGCCATATCGAACGAACAAAA ATTCTCGAGGCGTTTAAAACCAGTAAAACCGTGAACACTGTATTCCTGTCAAAGGTTGGT GATAACTCCATAGATATCCCTGAAGCGAATGTGATCATCCAGATTTCGTCACATGCTGGT TCTAGACGTCAAGAGGCTCAACGTTTGGGTCGTATCCTTAGGGCTAAGGGTAAACTTGAA GATAGAATGGCTGGTGGAAAAGAAGAGTACAATGCATTCTTCTACTCGCTTGTTTCTACC GATACACAGGAAATGTATTATTCAACGAAAAGACAGCAGTTTTTGATCGACCAAGGTTAT AGCTTCAAGGTAATAACAAGCCTCCCACCTCCGGACGCGGGTTCAAGCTTGGGCTACCAC AGTCAAGAAGAACAGTTGTCTCTTCTCGGAAAGGTGTTGAATGCTGGAGACGATATGGTT GGTTTAGAACAACTTGAAGAAGACACAGATGGAAAGGCTCTAAAGACGCGACGAAGCATG GGATCGATGAGTGCAATGTCCGGTGCAAATGGAAGGGTCTACATGGAATACAACTCAGGT CGTCAAAAATCTGGTAACCAATCCAAGAAACCTAAAGACCCAACCAAACGACACAATATC TTCAAAAAACGTTATGTTTGA

Peptide Sequence

PEP ID	AT5G41360.1
PEP Infomation	\| homolog of Xeroderma pigmentosum complementation group B 2 \| Chr5:16544574-16549121 FORWARD LENGTH=766 \| 201606
Sequence	MGNDERKRPTKKMKYGGKDDQKMKNIQNVEDYYDDADEDSRDGEGEEKRRDFTDLELKPD HGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG LETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS DDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAL VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTS DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRK VISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY AMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAG SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY SFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKALKTRRSM GSMSAMSGANGRVYMEYNSGRQKSGNQSKKPKDPTKRHNIFKKRYV

Transcript Sequence

Transcript ID	AT5G41360.1
Transcript Infomation	\| homolog of Xeroderma pigmentosum complementation group B 2 \| Chr5:16544340-16549327 FORWARD LENGTH=2741 \| 201606
Sequence	AACAATTTCCTTCCTCCGCTTCAAACGAGTCACCGACTCGACACAGGAATCCGAATTCGC CGGAGACGCAGCTTGCTTCGTTGAATAGCTTACAACGGGAAATTACCACGAAGACGGTTG TATATTCCCTCCGTCGTACAATTTAGGTTATGTGCGAATTCACAAATTGAAAATACAAGA GAAACAATCCCTAAAATCGATTTGATTAAGAGGAGCGAAAAGAAGAAAATCAATATGGGA AACGATGAAAGAAAACGACCTACAAAGAAGATGAAGTACGGTGGGAAGGATGATCAAAAG ATGAAGAACATACAAAACGTTGAAGATTACTATGATGATGCTGATGAGGATTCTCGTGAT GGTGAAGGAGAGGAGAAGAGGAGAGATTTTACTGATTTGGAGTTGAAGCCGGATCATGGA AATAGGCCTTTGTGGGCTTGTGCTGATGGAAAGATTTTCTTGGAGACATTTTCTCCTCTC TATAAACAAGCTTATGACTTTCTTATCGCCATTGCTGAACCCGTTTGCAGGCCTGAGTCA ATGCACGAGTATAATTTAACCCCACACTCGTTGTATGCTGCTGTTTCCGTTGGTCTTGAG ACAGAAACTATCATCTCTGTTTTGAATAAGCTATCTAAGACCAAGCTACCCGGGGAGATC ATTGATTTCATCCATGCTTCTACTGCTAATTATGGGAAAGTGAAGTTGGTATTGAAGAAA AATCGGTATTTTATTGAATCACCATTCCCGGAGGTGTTGAAAAGGCTTCTCAGTGATGAT GTCATAAATCGAGCAAGATTTACTTCTGAGCCATATTATGGTGGTGATGGATTTACGATC GGCAAAACAAGTGGTGAACTTGAAGCAGGACCTGGGGAGTTGTTGAATGAAGCAGAATTG GCAGCAGCAGCAGAAGAGAAAGAAACTCACTCATTTGAGATAGACCCTGCACTGGTGGAG AATGTTAAGCAGCGTTGCTTGCCAAATGCCTTGAATTACCCTATGTTAGAGGAATATGAC TTCAGGAACGATAATGTTAATCCTGATCTTGACATGGAACTGAAGCCCCATGCACAACCA AGGCCATACCAGGAAAAAAGTTTGAGCAAAATGTTTGGAAACGGACGAGCAAGATCTGGG ATTATAGTGTTACCTTGTGGAGCTGGTAAATCTCTAGTTGGTGTTTCTGCAGCGGCTCGT ATAAAGAAGAGTTGTCTTTGTTTGGCAACGAATGCTGTCTCGGTGGATCAATGGGCCTAC CAATTTAAGTTGTGGTCTACTATAAAAGATGACCAAATATGCCGTTTCACTTCTGATAGT AAAGAACGATTCCGTGGAAATGCTGGTGTTGTTGTGACAACCTATAATATGATTGCCTTT GGTGGTAAACGATCTGAAGAAGCAGAGAAGATTATAGAAGAAATGAGAAACAGAGAGTGG GGGTTGCTGCTTATGGACGAGGTGCATGTGGTTCCAGCCCATATGTTTAGGAAAGTTATC AGTATTACAAAATCTCACTGCAAGCTAGGACTTACAGCCACCCTTGTGAGAGAAGACGAA AAAATTACAGATTTAAACTTCCTCATTGGCCCGAAACTCTATGAAGCCAATTGGCTAGAT TTAGTTAAAGGAGGCTTTATTGCAAATGTTCAGTGTGCTGAAGTATGGTGTCCCATGACC AAAGAGTTTTTTGCAGAATATCTGAAGAAAGAGAACTCGAAAAAAAAACAGGCGCTTTAT GTCATGAACCCTAACAAGTTCAGAGCCTGTGAATTTTTGATACGTTTCCATGAACAACAA CGTGGGGATAAAATCATCGTCTTTGCAGACAATCTTTTTGCACTTACAGAGTATGCAATG AAACTCCGGAAACCGATGATTTACGGTGCAACCAGCCATATCGAACGAACAAAAATTCTC GAGGCGTTTAAAACCAGTAAAACCGTGAACACTGTATTCCTGTCAAAGGTTGGTGATAAC TCCATAGATATCCCTGAAGCGAATGTGATCATCCAGATTTCGTCACATGCTGGTTCTAGA CGTCAAGAGGCTCAACGTTTGGGTCGTATCCTTAGGGCTAAGGGTAAACTTGAAGATAGA ATGGCTGGTGGAAAAGAAGAGTACAATGCATTCTTCTACTCGCTTGTTTCTACCGATACA CAGGAAATGTATTATTCAACGAAAAGACAGCAGTTTTTGATCGACCAAGGTTATAGCTTC AAGGTAATAACAAGCCTCCCACCTCCGGACGCGGGTTCAAGCTTGGGCTACCACAGTCAA GAAGAACAGTTGTCTCTTCTCGGAAAGGTGTTGAATGCTGGAGACGATATGGTTGGTTTA GAACAACTTGAAGAAGACACAGATGGAAAGGCTCTAAAGACGCGACGAAGCATGGGATCG ATGAGTGCAATGTCCGGTGCAAATGGAAGGGTCTACATGGAATACAACTCAGGTCGTCAA AAATCTGGTAACCAATCCAAGAAACCTAAAGACCCAACCAAACGACACAATATCTTCAAA AAACGTTATGTTTGAGACAAGAGAACTCATATTCGGCTATATGTTTTGAGTTGTAACTTT GGTGCAAATTTGTTTCAGGCACAAAATCAAGAAAACCTAAACGAAGACACCCTACCTTAA AAGACCGTTAACATTTGATATTTGTTTTATTATGTGAATTGATTAATTGATATTAGAAAG TTCTTTCCTTTTTTTTGATATTTGTTTTCTAGCATATCATG