Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G41330.1
CDS Infomation

| BTB/POZ domain with WD40/YVTN repeat-like protein | Chr5:16536452-16537828 REVERSE LENGTH=1377 | 201606
Sequence

ATGAATTTTCCGACGATCCCTCATGAATCGAACGTTGTCTCCATCAACGTCGGAGGCCGA
ATCTTTCAAACAACGAAGCAAACCTTAAGCCTAGCCGGAACCGATTCTCTCCTATCTCAA
CTCGCTACTGAGACAACTCGTTTCGTCGATCGTGATCCCGATTTGTTCTCCGTTCTTCTC
TATATCCTCCGTACCGGAAACCTACCTGCTAGATCACGCGCCTTCGATGTTCGTGATCTC
ATCGATGAATCTAGATACTATGGAATCGAGTCTTTCTTAATCGATTCTCTCTCGAATTCG
TCGCAGTTCGAGCCGTTCGATCTCCGTAGATCTAGGATTCTTCAATTGAACGGTCGAGAT
TCTCCGTCGAGTATCTCACCGACTGTAATCGGCGGAGGTCTCCACGTGGCGCACGGTAGC
AAAATCACTTCGTTTGATTGGTCGTTGAGGCAAAAGTCGACTGTGTTGACTAATTTCTCC
GCCGTGGATTCGCTTCTAGAGATATCTCCGGGAGTTTTAGCTGCCGGAGCTACCGATTTC
CCTGGTTTGCAAATCATCGATCTCGATAACGGCGGATTCGTTCGTACGACTCTGAATTGG
GAAAACGTTACTAGGTCTAGCTCAACGGTTCAAGCCATAGGTTCTTCTCATGAGTTTTTG
TTCACTAGCTTTGAATCTAGTAGAAGGAACTCGAATTCGATTATGGTGTATGACCTTTCT
AGCTTGTTACCTGTGTCTGAGATTGATCATTGTGAGATCTATGGCGCTGATATTGATTCT
GCGATTCCATCGACTAAGTTGAAATGGATTCAGAGTTGTAATTTGTTGATGGTTTCTGGT
TCTCATACTAGTCCTTCTGGTGTCAATGGTCACATAAGGTTTTGGGATGTTAGGTCAAGG
AATATGGTTTGGGAGATTAAGGAGGCACAAGATTGTTTCTCTGATGTTACTGTCTCGGAT
AATCTCTCGGCGGTGTTCAAGGTCGGTGTGACTTCAGGGGAAGTTTTCTACGCCGATTTG
AGGAGTTTAGGAACTAAGGATCCATGGGTTTGTCTTGGGGAAGAGAAGAAGAGAAACTTG
AATGAAAGAAGAGGAGTTGGGTCTAAGATAGAGAGCTATGGGAATCATGTGTTTTGCAGT
AGTAAAGGAAGTGGGATAGAGCTTTGGTCTGAAGTGATCACGGGTTTGGTGGGGAATGCA
AGCCGGGATGTATTGGAAGAGAGGGTTTTTAGGAAGAATTCGTTGGGAAAATTAGCGGAT
TCAGGAGAAAACAAGATAACAGGATTGGCGTTTGGAGGAAATAGAATGTTTGTGACCCGA
AAGGATCAGCAGTCTGTTCAGGTTTGGCAAAGTCCTAGTCGTGGAATATCTATCTAA

Peptide Sequence

PEP ID

AT5G41330.1
PEP Infomation

| BTB/POZ domain with WD40/YVTN repeat-like protein | Chr5:16536452-16537828 REVERSE LENGTH=458 | 201606
Sequence

MNFPTIPHESNVVSINVGGRIFQTTKQTLSLAGTDSLLSQLATETTRFVDRDPDLFSVLL
YILRTGNLPARSRAFDVRDLIDESRYYGIESFLIDSLSNSSQFEPFDLRRSRILQLNGRD
SPSSISPTVIGGGLHVAHGSKITSFDWSLRQKSTVLTNFSAVDSLLEISPGVLAAGATDF
PGLQIIDLDNGGFVRTTLNWENVTRSSSTVQAIGSSHEFLFTSFESSRRNSNSIMVYDLS
SLLPVSEIDHCEIYGADIDSAIPSTKLKWIQSCNLLMVSGSHTSPSGVNGHIRFWDVRSR
NMVWEIKEAQDCFSDVTVSDNLSAVFKVGVTSGEVFYADLRSLGTKDPWVCLGEEKKRNL
NERRGVGSKIESYGNHVFCSSKGSGIELWSEVITGLVGNASRDVLEERVFRKNSLGKLAD
SGENKITGLAFGGNRMFVTRKDQQSVQVWQSPSRGISI

Transcript Sequence

Transcript ID

AT5G41330.1
Transcript Infomation

| BTB/POZ domain with WD40/YVTN repeat-like protein | Chr5:16535339-16538016 REVERSE LENGTH=2420 | 201606
Sequence

ACTGTTTATCCGTCTTATCATCCTCTGCCAAAAAAAAAAAAAAAAAAAGCGAAGAACGTC
TTCTGATTTGCTCGTATGAATTTTCCGACGATCCCTCATGAATCGAACGTTGTCTCCATC
AACGTCGGAGGCCGAATCTTTCAAACAACGAAGCAAACCTTAAGCCTAGCCGGAACCGAT
TCTCTCCTATCTCAACTCGCTACTGAGACAACTCGTTTCGTCGATCGTGATCCCGATTTG
TTCTCCGTTCTTCTCTATATCCTCCGTACCGGAAACCTACCTGCTAGATCACGCGCCTTC
GATGTTCGTGATCTCATCGATGAATCTAGATACTATGGAATCGAGTCTTTCTTAATCGAT
TCTCTCTCGAATTCGTCGCAGTTCGAGCCGTTCGATCTCCGTAGATCTAGGATTCTTCAA
TTGAACGGTCGAGATTCTCCGTCGAGTATCTCACCGACTGTAATCGGCGGAGGTCTCCAC
GTGGCGCACGGTAGCAAAATCACTTCGTTTGATTGGTCGTTGAGGCAAAAGTCGACTGTG
TTGACTAATTTCTCCGCCGTGGATTCGCTTCTAGAGATATCTCCGGGAGTTTTAGCTGCC
GGAGCTACCGATTTCCCTGGTTTGCAAATCATCGATCTCGATAACGGCGGATTCGTTCGT
ACGACTCTGAATTGGGAAAACGTTACTAGGTCTAGCTCAACGGTTCAAGCCATAGGTTCT
TCTCATGAGTTTTTGTTCACTAGCTTTGAATCTAGTAGAAGGAACTCGAATTCGATTATG
GTGTATGACCTTTCTAGCTTGTTACCTGTGTCTGAGATTGATCATTGTGAGATCTATGGC
GCTGATATTGATTCTGCGATTCCATCGACTAAGTTGAAATGGATTCAGAGTTGTAATTTG
TTGATGGTTTCTGGTTCTCATACTAGTCCTTCTGGTGTCAATGGTCACATAAGGTTTTGG
GATGTTAGGTCAAGGAATATGGTTTGGGAGATTAAGGAGGCACAAGATTGTTTCTCTGAT
GTTACTGTCTCGGATAATCTCTCGGCGGTGTTCAAGGTCGGTGTGACTTCAGGGGAAGTT
TTCTACGCCGATTTGAGGAGTTTAGGAACTAAGGATCCATGGGTTTGTCTTGGGGAAGAG
AAGAAGAGAAACTTGAATGAAAGAAGAGGAGTTGGGTCTAAGATAGAGAGCTATGGGAAT
CATGTGTTTTGCAGTAGTAAAGGAAGTGGGATAGAGCTTTGGTCTGAAGTGATCACGGGT
TTGGTGGGGAATGCAAGCCGGGATGTATTGGAAGAGAGGGTTTTTAGGAAGAATTCGTTG
GGAAAATTAGCGGATTCAGGAGAAAACAAGATAACAGGATTGGCGTTTGGAGGAAATAGA
ATGTTTGTGACCCGAAAGGATCAGCAGTCTGTTCAGGTTTGGCAAAGTCCTAGTCGTGGA
ATATCTATCTAATGAGCAAGTATTAAGCTTTGGTTCGAGGTGATCACGAGTTGCTTAAAG
CCGAATCCAACAAAAACTAGTTAGCGACTTACATTGTGTTAAAGAAGAATGAATGATCTT
AATCCCAATACTTGATGAAGCTATTCCAACCATGAATTTCTTATCTCTGATAATCTTATA
AAAAGGACTTACATCGTTCGTCAGACGAGGCTGTGAAGGATGTTTGCATTCTAACGACAT
GACCTTATACAAGTACTGCAGAGAGAAGCAAATGACGATGCTTGGCAAAATATCAAATTG
CGGAAACACCTTTCGGGTTCAAACGGCCTTTATCTACCAGGGCTAGTTCTGTAATCGGAG
AGGCCGTTATTACAGTTGCTTACTTCAGCTTCAGGAAATCTGTTACCGGAAAATCTTATG
GCTCCACCTGCCATCATCAGACCTCCGAACATATTGTTGTCGTCTCTCTGCTGTGAAGAA
GTCGCAGAATTCAGTTGTGCTGGAAAATTATAACCACCTGCCATCAGATTAGACTGAAAA
GCTGCCGGAAAACCAGAAAAGTAACCATTGTTGTGCAACAGAGAATTCTCAAATCCTTGT
CCTCCTGTGACTCCTGTCTGAAATTCAGAAAGATCAGGAGTCTGAGCTACTGGTTGTCTC
ATTTGAAAGTTGGTGTTACTTGCTGAAGGAGTAATCCCTTGGCTTGAAGAAGGAAACAAC
GAAGAAGGTACTGGAAAACTCTGCAATAGTGATGATGAAGACAGTTTTGGAAACAACGAA
GAATGTACCGGAAAACTCTGCAACGATGATGATGACAGTTGTGACGCAAAAGGTGTCCCA
AAGTTATGATCTTTCTGCATTTCAGGTCCTGTTATCTCCACTATTGATGATCTGTTCTTG
TTGGTATTAGCTTCGCTTGTCTTCTTTAGTTTCTTACTCAGATTTGGAGCTTGAATGGCC
AAAACAATACTTTTCTGACC