Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G41310.1
CDS Infomation	\| P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein \| Chr5:16516634-16522392 REVERSE LENGTH=2886 \| 201606
Sequence	ATGAAAAATCGAATCAAAAAAGGATCCAGCATGATTGGTGTTTATGGAAGATCAGACGGA TCAAGCAGCATTCAGTCTTCTAATGGATCCGAAAGTCGTGAAAGTATAGATGACAATAAG CAAGGTCATCAAAGTTTAGTAGAGTGGTTAAATGAGACACTTCCTTATTTGAATTTACCA TGGGAAGCTTCAGAGGAAGAATTGAGAGCATGTTTGGTGGATGGTACTGTCTTGTGCAAT CTCTTAAATCAGCTTAGTCCCGGTTCGATGCGAATGGGAGGAAGCTTCGAGCCTGGTTGT GTAAATATTGAGCGGTTTTTGGCAGCTATGGATGAAATGACATTGCCCAGATTTGAGTCT CTTAAGGCGCTTAAAGCTAGTTTCTCTGATGATGGATATGATAAGAATACACTTTCTGCA AGAAGAAGATGGAGTTTGCCTGCGGACCATTCAAAGGGAGTTGATAGCAACTTTAATGAT GGAGGATCACAGTTTATAGAAGCATCTGAGATTAATACATCTCATCACAGCTTACAAAAT ACTTCTACACGATCGTTGTTTGACATGCTGGATAGGCTTCTTGATGAGAGCTCGCAGAAG ATGAATGTGTCTCATGTTTATGTATCTATCTTGAGAGGCATTGTGCAAGTTGTTGAGCAA CGGATCTCAAATCAAGCTGAGAACCTAAAAAACCAAAATATACTCTTTAGGGTTCGTGAA GAAAAATATAGATCAAGAATAAATGTTTTAGAAACTTTGGCATCTGGAACAACAGATGAG AATGAGGTCAGAAGAAAAAGATGTGCTCCAAATAGAAAAGGAAAAGAGCGTAGTAATGCT GAACTTTCTAAGTTGAAGCAAGAACTTGAAATTGTGAAAGAGACACATGAAAAACAGTTT TTGGAACTAAAACTAAATGCTCAAAAAGCTAAAGTTGAGTTGGAGAGGCAAGTAAAGAAT TCAGAGTTACGTGTAGTAGAAGCAAAAGAACTCGAGAAGTTATGTGAAACTAAAACTAAA AGATGGGAGAAGAAAGAACAAACATATAAGAGGTTTATAAACCACCAGACAGAGGCTTTG CAGGAGTTGAAAGCTACTTCTATGTCTTTAAAACATGATGTATTAAAGATAGGAGAGAAC TACTTCCTGGATCTAACTTACTATGGTATAAAGCTCAGAGGAGTGGCTCATGCAGCAAAA AATTACCAGATAATAATTGAAGAGAATCGAAGACTTTACAATGAAGTGCAAGAATTAAAA GGAAATATTAGAGTATATTGCCGGATAAGACCATTCCTTCAAGGACAAAACAAGAAACAA ACATCAATAGAGTACACAGGTGAGAATGGTGAACTGGTGGTTGCAAATCCCTTAAAGCAA GGCAAAGATACGTATCGTTTATTCAAATTCAACAAAGTCTTTGGCCCTGAATCAACTCAA GAGGAAGTTTTCTTAGATACTCGACCTATGATTCGATCCATTCTTGATGGCTACAATGTA TGTATATTTGCTTATGGCCAGACGGGTTCTGGAAAGACTTATACGATGAGTGGACCAAGC ATAACTTCAGAAGAAGATCGGGGTGTTAACTATCGAGCTTTGAATGACTTGTTCCACTTA ACTCAAAGTAGACAAAACTCAGTGATGTATGAAGTTGGTGTTCAAATGGTTGAGATTTAC AATGAGCAAGTTCGTGACCTACTTTCTCAGGATGTTCCTGATGCAAGCATGCATTCTGTA AGATCAACTGAAGATGTTCTTGAACTGATGAATATTGGGTTGATGAATAGAACTGTTGGC GCCACAACCCTTAATGAAAAGAGTAGTAGATCACACAGTGTTCTTTCGGTTCATGTACGC GGTGTTGATGTTAAAACGGAATCCGTCTTGCGTGGTAGTTTGCATTTGGTTGATCTTGCT GGAAGTGAGAGAGTTGGTCGCTCTGAAGTAACCGGAGAGAGACTCAAAGAAGCTCAACAT ATAAACAAATCATTGTCTGCTCTCGGAGATGTTATATTCGCTCTAGCACATAAGAATCCT CATGTACCTTATAGAAACAGCAAGCTAACACAAGTCCTCCAGAATTCTTTAGGAGGGCAA GCGAAAACTCTTATGTTTGTTCAAATTAATCCTGATGAAGATTCATATGCTGAGACTGTA AGTACTTTGAAATTTGCGGAAAGAGTTTCTGGTGTCGAGTTAGGTGCAGCTAGAAGCTAT AAGGAAGGAAGAGATGTTAGACAACTCATGGAACAGGTATCGAACTTGAAAGATATGATT GCCAAGAAAGACGAAGAACTTCAAAAGTTTCAAAACATAAATGGTATCCAAAAACGTGGA TTAAGCAAACTAAGAATTGTCTCTCCTCCTAGAAGGCATTCTTTAGGAGGAGCTTTAACA AATTCTCCAAGAAGAAGACAAGGACCTGGTTTACTTGGAAGAACAACTTCAGATATACAT CGACATCAAAATGAATCTCGATCATCGTCTAAGTTTTCTGGTGGGGCTAAAGACAATAAT ATATTTGAGGATACTGAACTCTTAGGTTTTGAAGAATCAAATAATGAGGAAAGATTGAGT GATATCTCAGATAGTTGTCTTTCAATGGGAACAGAAACTGATGGCTCGATTAGTAGCGGT GCAATGGAGTTGACACTCTTCCCTGAAACCTCAAATCCTCCTGAAATGTTTGAACAATCT GAACAAAATGACAAAGCTCATGTTGGAGTTGGACCATCAAAGCCACTGAAACATACACCA AAACCAGACATAAGTAAACCTTCTCGTCTGTCGATTTCCACTACCTCATCTAAGGCTTTA ACAAGTTCTAAAAGACCGGTCACTGGCATTTCATCTTCAGTAAAACCTCTTAACAGAAAG AGATAA

Peptide Sequence

PEP ID	AT5G41310.1
PEP Infomation	\| P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein \| Chr5:16516634-16522392 REVERSE LENGTH=961 \| 201606
Sequence	MKNRIKKGSSMIGVYGRSDGSSSIQSSNGSESRESIDDNKQGHQSLVEWLNETLPYLNLP WEASEEELRACLVDGTVLCNLLNQLSPGSMRMGGSFEPGCVNIERFLAAMDEMTLPRFES LKALKASFSDDGYDKNTLSARRRWSLPADHSKGVDSNFNDGGSQFIEASEINTSHHSLQN TSTRSLFDMLDRLLDESSQKMNVSHVYVSILRGIVQVVEQRISNQAENLKNQNILFRVRE EKYRSRINVLETLASGTTDENEVRRKRCAPNRKGKERSNAELSKLKQELEIVKETHEKQF LELKLNAQKAKVELERQVKNSELRVVEAKELEKLCETKTKRWEKKEQTYKRFINHQTEAL QELKATSMSLKHDVLKIGENYFLDLTYYGIKLRGVAHAAKNYQIIIEENRRLYNEVQELK GNIRVYCRIRPFLQGQNKKQTSIEYTGENGELVVANPLKQGKDTYRLFKFNKVFGPESTQ EEVFLDTRPMIRSILDGYNVCIFAYGQTGSGKTYTMSGPSITSEEDRGVNYRALNDLFHL TQSRQNSVMYEVGVQMVEIYNEQVRDLLSQDVPDASMHSVRSTEDVLELMNIGLMNRTVG ATTLNEKSSRSHSVLSVHVRGVDVKTESVLRGSLHLVDLAGSERVGRSEVTGERLKEAQH INKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQNSLGGQAKTLMFVQINPDEDSYAETV STLKFAERVSGVELGAARSYKEGRDVRQLMEQVSNLKDMIAKKDEELQKFQNINGIQKRG LSKLRIVSPPRRHSLGGALTNSPRRRQGPGLLGRTTSDIHRHQNESRSSSKFSGGAKDNN IFEDTELLGFEESNNEERLSDISDSCLSMGTETDGSISSGAMELTLFPETSNPPEMFEQS EQNDKAHVGVGPSKPLKHTPKPDISKPSRLSISTTSSKALTSSKRPVTGISSSVKPLNRK R

Transcript Sequence

Transcript ID	AT5G41310.1
Transcript Infomation	\| P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein \| Chr5:16516470-16522392 REVERSE LENGTH=3050 \| 201606
Sequence	ATGAAAAATCGAATCAAAAAAGGATCCAGCATGATTGGTGTTTATGGAAGATCAGACGGA TCAAGCAGCATTCAGTCTTCTAATGGATCCGAAAGTCGTGAAAGTATAGATGACAATAAG CAAGGTCATCAAAGTTTAGTAGAGTGGTTAAATGAGACACTTCCTTATTTGAATTTACCA TGGGAAGCTTCAGAGGAAGAATTGAGAGCATGTTTGGTGGATGGTACTGTCTTGTGCAAT CTCTTAAATCAGCTTAGTCCCGGTTCGATGCGAATGGGAGGAAGCTTCGAGCCTGGTTGT GTAAATATTGAGCGGTTTTTGGCAGCTATGGATGAAATGACATTGCCCAGATTTGAGTCT CTTAAGGCGCTTAAAGCTAGTTTCTCTGATGATGGATATGATAAGAATACACTTTCTGCA AGAAGAAGATGGAGTTTGCCTGCGGACCATTCAAAGGGAGTTGATAGCAACTTTAATGAT GGAGGATCACAGTTTATAGAAGCATCTGAGATTAATACATCTCATCACAGCTTACAAAAT ACTTCTACACGATCGTTGTTTGACATGCTGGATAGGCTTCTTGATGAGAGCTCGCAGAAG ATGAATGTGTCTCATGTTTATGTATCTATCTTGAGAGGCATTGTGCAAGTTGTTGAGCAA CGGATCTCAAATCAAGCTGAGAACCTAAAAAACCAAAATATACTCTTTAGGGTTCGTGAA GAAAAATATAGATCAAGAATAAATGTTTTAGAAACTTTGGCATCTGGAACAACAGATGAG AATGAGGTCAGAAGAAAAAGATGTGCTCCAAATAGAAAAGGAAAAGAGCGTAGTAATGCT GAACTTTCTAAGTTGAAGCAAGAACTTGAAATTGTGAAAGAGACACATGAAAAACAGTTT TTGGAACTAAAACTAAATGCTCAAAAAGCTAAAGTTGAGTTGGAGAGGCAAGTAAAGAAT TCAGAGTTACGTGTAGTAGAAGCAAAAGAACTCGAGAAGTTATGTGAAACTAAAACTAAA AGATGGGAGAAGAAAGAACAAACATATAAGAGGTTTATAAACCACCAGACAGAGGCTTTG CAGGAGTTGAAAGCTACTTCTATGTCTTTAAAACATGATGTATTAAAGATAGGAGAGAAC TACTTCCTGGATCTAACTTACTATGGTATAAAGCTCAGAGGAGTGGCTCATGCAGCAAAA AATTACCAGATAATAATTGAAGAGAATCGAAGACTTTACAATGAAGTGCAAGAATTAAAA GGAAATATTAGAGTATATTGCCGGATAAGACCATTCCTTCAAGGACAAAACAAGAAACAA ACATCAATAGAGTACACAGGTGAGAATGGTGAACTGGTGGTTGCAAATCCCTTAAAGCAA GGCAAAGATACGTATCGTTTATTCAAATTCAACAAAGTCTTTGGCCCTGAATCAACTCAA GAGGAAGTTTTCTTAGATACTCGACCTATGATTCGATCCATTCTTGATGGCTACAATGTA TGTATATTTGCTTATGGCCAGACGGGTTCTGGAAAGACTTATACGATGAGTGGACCAAGC ATAACTTCAGAAGAAGATCGGGGTGTTAACTATCGAGCTTTGAATGACTTGTTCCACTTA ACTCAAAGTAGACAAAACTCAGTGATGTATGAAGTTGGTGTTCAAATGGTTGAGATTTAC AATGAGCAAGTTCGTGACCTACTTTCTCAGGATGTTCCTGATGCAAGCATGCATTCTGTA AGATCAACTGAAGATGTTCTTGAACTGATGAATATTGGGTTGATGAATAGAACTGTTGGC GCCACAACCCTTAATGAAAAGAGTAGTAGATCACACAGTGTTCTTTCGGTTCATGTACGC GGTGTTGATGTTAAAACGGAATCCGTCTTGCGTGGTAGTTTGCATTTGGTTGATCTTGCT GGAAGTGAGAGAGTTGGTCGCTCTGAAGTAACCGGAGAGAGACTCAAAGAAGCTCAACAT ATAAACAAATCATTGTCTGCTCTCGGAGATGTTATATTCGCTCTAGCACATAAGAATCCT CATGTACCTTATAGAAACAGCAAGCTAACACAAGTCCTCCAGAATTCTTTAGGAGGGCAA GCGAAAACTCTTATGTTTGTTCAAATTAATCCTGATGAAGATTCATATGCTGAGACTGTA AGTACTTTGAAATTTGCGGAAAGAGTTTCTGGTGTCGAGTTAGGTGCAGCTAGAAGCTAT AAGGAAGGAAGAGATGTTAGACAACTCATGGAACAGGTATCGAACTTGAAAGATATGATT GCCAAGAAAGACGAAGAACTTCAAAAGTTTCAAAACATAAATGGTATCCAAAAACGTGGA TTAAGCAAACTAAGAATTGTCTCTCCTCCTAGAAGGCATTCTTTAGGAGGAGCTTTAACA AATTCTCCAAGAAGAAGACAAGGACCTGGTTTACTTGGAAGAACAACTTCAGATATACAT CGACATCAAAATGAATCTCGATCATCGTCTAAGTTTTCTGGTGGGGCTAAAGACAATAAT ATATTTGAGGATACTGAACTCTTAGGTTTTGAAGAATCAAATAATGAGGAAAGATTGAGT GATATCTCAGATAGTTGTCTTTCAATGGGAACAGAAACTGATGGCTCGATTAGTAGCGGT GCAATGGAGTTGACACTCTTCCCTGAAACCTCAAATCCTCCTGAAATGTTTGAACAATCT GAACAAAATGACAAAGCTCATGTTGGAGTTGGACCATCAAAGCCACTGAAACATACACCA AAACCAGACATAAGTAAACCTTCTCGTCTGTCGATTTCCACTACCTCATCTAAGGCTTTA ACAAGTTCTAAAAGACCGGTCACTGGCATTTCATCTTCAGTAAAACCTCTTAACAGAAAG AGATAAAGATCTTTTTAGTTTCGATAACGTTATTCATTGTAGATTTAAATCTAAGCCCAA AAGCTTCTTTTTCTTTCAGATCAAGTAATCTTGTTTTGTTTATCCGAACGTGGAAAGTAA GTAACTCCGGTTTGATATCATTGGAAAATGCTTATGATGATTTATTTAGT