Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G41100.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:16447429-16450610 FORWARD LENGTH=1761 \| 201606
Sequence	ATGATGAAAGCTTCGTTTGGAAGGTTAAGAAGATTCGCATTACCCAAAGCCGATGCGATT GATATAGGAGAGCTTTTTCCCACTGCACAAATTGAAGGTCTTGCTCGAGCCGCCAAGGAT ATGCAAGATATGAGAGAGGGTTATGATAGATTACTCGAAGTAGCTGCTGCTATGGCTAAT AGCGCATATGAGTTCTCTGAATCATTGGGGGAAATGGGCTCATGCTTGGAGCAAATCGCG CCTCATAATGATCAAGAAAGTGGTGGAATTCTTCTAATGTTAGGTAAAGTTCAGTTTGAG CTTAAGAAACTCGTCGACACTTATCGTTCTCAAATATTCAAGACCATTACACGACCTTCA GAGTCACTTCTCAGTGACCTTAGAACTGTTGAGGATATGAAGCAACAATGTGAAGAAAAG AGAGACGTTGTTAAGCACATGCTAATGGAGCATGTGAAAGACAAGGTACAAGTTAAAGGC ACTAAAGGGGAGAGACTTATTCGCCGTCAGCTAGAGACTGCTCGCGATGAGCTACAAGAT GAGGCGACTCTGTGCATTTTCCGATTGAAATCTCTCAAGGAAGGGCAAGCTCGAAGTCTC CTCACACAAGCAGCCCGCCACCACACTGCTCAGATGCATATGTTCTTTGCTGGTCTGAAA TCGCTTGAGGCAGTAGAGCAACACGTCAGAATTGCTGCAGATAGACAACACATCGACTGT GTGCTCTCTGATCCCGGGAACGAAATGGATTGTAGTGAGGATAATGATGATGATGACCGA CTTGTTAATAGAGATGGAGAACTCAGTTTTGACTACATAACAAGTGAGCAGAGAGTAGAA GTTATATCTACACCTCATGGATCGATGAAGATGGATGACACAGATCTCTCGTTTCAACGC CCTTCACCTGCAGGATCAGCAACAGTAAATGCAGACCCTAGAGAAGAGCACTCAGTTTCA AACCGTGATCGCAGAACGAGCAGCCATTCAGCACCTCTGTTTCCGGATAAGAAAGCTGAT TTAGCAGATAGATCGATGAGGCAGATGACTCCATCTGCAAATGCTTACATATTACCAACT CCCGTCGACTCAAAGTCCTCACCAATCTTCACAAAACCTGTCACCCAGACAAACCACAGT GCAAACTTATGGCATTCATCTCCACTAGAACCAATAAAAACCGCCCATAAAGATGCGGAA AGCAACCTCTATTCCCGTCTTCCCCGTCCTTCAGAACACGCATTTTCTGGACCACTCAAG CCATCCTCAACCCGTCTTCCAGTACCAGTTGCAGTTCAGGCTCAGTCATCTTCTCCCAGA ATATCTCCTACCGCTTCACCGCCTCTTGCTTCTTCCCCACGAATCAACGAACTCCATGAG CTTCCAAGACCACCAGGTCAATTTGCACCGCCACGACGCTCGAAATCTCCTGGTTTGGTT GGTCATTCGGCTCCATTAACGGCTTGGAATCAAGAAAGAAGCAATGTAGTAGTGTCAACC AACATTGTAGCATCACCACTTCCGGTTCCACCGCTTGTTGTACCGAGAAGCTACTCGATA CCTTCTAGAAACCAGAGAGCAATGGCCCAACAACCCTTGCCCGAGAGGAACCAAAACAGA GTAGCCTCTCCACCGCCTCTTCCGCTGACTCCAGCGTCTCTGATGAATCTCAGATCGCTG TCTCGGTCTCATGTCGGGGAAGTTGCTCAGAGCGGACTAATTAGAGGTAACGGAAACAAA ACTAACTTACTGTATTTGTAA

Peptide Sequence

PEP ID	AT5G41100.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:16447429-16450610 FORWARD LENGTH=586 \| 201606
Sequence	MMKASFGRLRRFALPKADAIDIGELFPTAQIEGLARAAKDMQDMREGYDRLLEVAAAMAN SAYEFSESLGEMGSCLEQIAPHNDQESGGILLMLGKVQFELKKLVDTYRSQIFKTITRPS ESLLSDLRTVEDMKQQCEEKRDVVKHMLMEHVKDKVQVKGTKGERLIRRQLETARDELQD EATLCIFRLKSLKEGQARSLLTQAARHHTAQMHMFFAGLKSLEAVEQHVRIAADRQHIDC VLSDPGNEMDCSEDNDDDDRLVNRDGELSFDYITSEQRVEVISTPHGSMKMDDTDLSFQR PSPAGSATVNADPREEHSVSNRDRRTSSHSAPLFPDKKADLADRSMRQMTPSANAYILPT PVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYSRLPRPSEHAFSGPLK PSSTRLPVPVAVQAQSSSPRISPTASPPLASSPRINELHELPRPPGQFAPPRRSKSPGLV GHSAPLTAWNQERSNVVVSTNIVASPLPVPPLVVPRSYSIPSRNQRAMAQQPLPERNQNR VASPPPLPLTPASLMNLRSLSRSHVGEVAQSGLIRGNGNKTNLLYL

Transcript Sequence

Transcript ID	AT5G41100.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:16447185-16450909 FORWARD LENGTH=2304 \| 201606
Sequence	CTCATTTTCTCCTCCTCCGTCTTTCTGCTGTTTCTTCGATCTGTTTCTTTGACCAGAAAA ACAAAAGCTTCAAACTTTTTAGCTTCTTCTTCTTCCTTCAATGTCGTTGAACACATCCCA CGATACTTGACAAAATATCTCACTCTTTCGTCTCTCTGTTTTCGACTCGCAAACCATCGA AGCGCCGATTAATCTTAGAGGAATTTCTTCGTGATTAGGGTTTTGTTTAGTTCTATCTGG AGATATGATGAAAGCTTCGTTTGGAAGGTTAAGAAGATTCGCATTACCCAAAGCCGATGC GATTGATATAGGAGAGCTTTTTCCCACTGCACAAATTGAAGGTCTTGCTCGAGCCGCCAA GGATATGCAAGATATGAGAGAGGGTTATGATAGATTACTCGAAGTAGCTGCTGCTATGGC TAATAGCGCATATGAGTTCTCTGAATCATTGGGGGAAATGGGCTCATGCTTGGAGCAAAT CGCGCCTCATAATGATCAAGAAAGTGGTGGAATTCTTCTAATGTTAGGTAAAGTTCAGTT TGAGCTTAAGAAACTCGTCGACACTTATCGTTCTCAAATATTCAAGACCATTACACGACC TTCAGAGTCACTTCTCAGTGACCTTAGAACTGTTGAGGATATGAAGCAACAATGTGAAGA AAAGAGAGACGTTGTTAAGCACATGCTAATGGAGCATGTGAAAGACAAGGTACAAGTTAA AGGCACTAAAGGGGAGAGACTTATTCGCCGTCAGCTAGAGACTGCTCGCGATGAGCTACA AGATGAGGCGACTCTGTGCATTTTCCGATTGAAATCTCTCAAGGAAGGGCAAGCTCGAAG TCTCCTCACACAAGCAGCCCGCCACCACACTGCTCAGATGCATATGTTCTTTGCTGGTCT GAAATCGCTTGAGGCAGTAGAGCAACACGTCAGAATTGCTGCAGATAGACAACACATCGA CTGTGTGCTCTCTGATCCCGGGAACGAAATGGATTGTAGTGAGGATAATGATGATGATGA CCGACTTGTTAATAGAGATGGAGAACTCAGTTTTGACTACATAACAAGTGAGCAGAGAGT AGAAGTTATATCTACACCTCATGGATCGATGAAGATGGATGACACAGATCTCTCGTTTCA ACGCCCTTCACCTGCAGGATCAGCAACAGTAAATGCAGACCCTAGAGAAGAGCACTCAGT TTCAAACCGTGATCGCAGAACGAGCAGCCATTCAGCACCTCTGTTTCCGGATAAGAAAGC TGATTTAGCAGATAGATCGATGAGGCAGATGACTCCATCTGCAAATGCTTACATATTACC AACTCCCGTCGACTCAAAGTCCTCACCAATCTTCACAAAACCTGTCACCCAGACAAACCA CAGTGCAAACTTATGGCATTCATCTCCACTAGAACCAATAAAAACCGCCCATAAAGATGC GGAAAGCAACCTCTATTCCCGTCTTCCCCGTCCTTCAGAACACGCATTTTCTGGACCACT CAAGCCATCCTCAACCCGTCTTCCAGTACCAGTTGCAGTTCAGGCTCAGTCATCTTCTCC CAGAATATCTCCTACCGCTTCACCGCCTCTTGCTTCTTCCCCACGAATCAACGAACTCCA TGAGCTTCCAAGACCACCAGGTCAATTTGCACCGCCACGACGCTCGAAATCTCCTGGTTT GGTTGGTCATTCGGCTCCATTAACGGCTTGGAATCAAGAAAGAAGCAATGTAGTAGTGTC AACCAACATTGTAGCATCACCACTTCCGGTTCCACCGCTTGTTGTACCGAGAAGCTACTC GATACCTTCTAGAAACCAGAGAGCAATGGCCCAACAACCCTTGCCCGAGAGGAACCAAAA CAGAGTAGCCTCTCCACCGCCTCTTCCGCTGACTCCAGCGTCTCTGATGAATCTCAGATC GCTGTCTCGGTCTCATGTCGGGGAAGTTGCTCAGAGCGGACTAATTAGAGGTAACGGAAA CAAAACTAACTTACTGTATTTGTAACATATCTTTAATCATCAATGATTTTAAGACATGGT TTGTTTATATTAACGCAGGAGTAAAACTGACTGAACACTGACCTTGTAACGGTTGCGTTT GATCGAAACGTTAGTTGTAGAAACTAGAAAGAGACCCATAAGTAAATATAGAAGTCGATA TTTTTGTATTTCGTTAGTTGTTGAATCTCCTAATTTGTTCTTAAGCCTCCGATATTTTGG ATCTTTTTTATCCTTGCTTTGAAAGCAACGTCAACGGAAAAATTACTTTCTTACTTAACT CTGAGAAATACGATTAAAAATGAG