Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G40390.1
CDS Infomation	\| Raffinose synthase family protein \| Chr5:16161720-16165085 FORWARD LENGTH=2352 \| 201606
Sequence	ATGGCTTCGCCGTGTTTGACCAAGTCCGATTCCGGTATCAATGGCGTTGACTTTACCGAA AAATTCCGGTTAGAAGATTCCACTCTCTTAGCCAATGGTCAAGTCGTCTTAACCGATGTT CCGGTTAACGTTACTCTCACCTCTTCACCTTACTTAGTCGACAAAGACGGTGTACCACTC GACGTCTCTGCCGGTTCATTCATCGGGTTTAACCTCGACGGAGAGCCCAAAAGCCACCAC GTGGCATCCATCGGAAAACTCAAGAACATTCGTTTCATGAGCATATTCCGTTTCAAGGTT TGGTGGACTACTCATTGGGTCGGATCAAACGGACGTGACATCGAGAACGAGACTCAAATC ATCATTCTTGATCAATCCGGGTCGGATTCTGGACCCGGATCCGGGTCGGGTCGTCCTTAT GTTCTCTTGCTACCTCTTCTTGAAGGCTCCTTCCGTTCATCATTCCAATCCGGAGAAGAC GATGACGTGGCGGTCTGTGTCGAATCCGGGTCGACCGAAGTAACCGGGTCGGAGTTTCGT CAGATTGTGTATGTCCATGCCGGGGATGACCCGTTCAAGCTCGTGAAAGACGCCATGAAA GTGATTAGGGTTCATATGAATACGTTCAAGCTTCTTGAAGAGAAATCGCCGCCGGGAATT GTCGATAAATTCGGGTGGTGCACTTGGGATGCTTTTTACTTGACGGTGAATCCTGACGGA GTTCATAAAGGTGTTAAGTGTCTCGTCGACGGTGGTTGTCCTCCGGGATTGGTTCTTATC GACGACGGTTGGCAATCGATTGGACATGATTCCGATGGTATTGATGTCGAAGGGATGAAT ATTACCGTCGCCGGTGAACAAATGCCTTGCAGGCTTCTGAAGTTTGAAGAGAACCACAAA TTCAAAGACTACGTTTCTCCAAAAGATCAAAACGACGTCGGAATGAAAGCTTTCGTCAGA GATCTGAAAGATGAATTCTCCACCGTTGATTACATCTACGTTTGGCACGCACTTTGCGGT TACTGGGGAGGTCTCCGTCCTGAAGCTCCGGCTCTGCCGCCGTCGACCATTATCCGGCCC GAGCTCTCTCCAGGACTTAAACTAACAATGGAAGATCTCGCCGTCGATAAGATCATAGAG ACCGGAATCGGATTTGCCTCGCCGGACTTGGCGAAAGAGTTCTACGAAGGTCTTCACTCT CATCTTCAAAACGCCGGTATTGACGGCGTTAAAGTTGATGTCATCCACATATTGGAGATG TTATGCCAGAAATATGGCGGGAGAGTTGACTTGGCCAAAGCTTACTTCAAGGCGTTAACG TCGTCAGTGAATAAGCATTTTAACGGTAACGGCGTTATCGCCAGCATGGAGCATTGCAAT GACTTTATGTTCCTTGGAACTGAAGCCATCTCTCTTGGTCGTGTCGGTGATGACTTTTGG TGCACGGATCCATCAGGCGATCCAAACGGTACGTTTTGGCTACAAGGATGTCACATGGTC CACTGTGCATACAACAGTCTCTGGATGGGAAATTTCATTCAGCCTGATTGGGACATGTTT CAGTCCACACATCCTTGTGCTGAGTTCCATGCTGCTTCTCGGGCCATTTCCGGTGGGCCG ATTTACATCAGTGATTGTGTGGGCAAGCATGATTTTGATCTCTTGAAGCGTCTTGTTTTG CCCAACGGTTCGATTTTGAGGTGTGAGTACTATGCTCTCCCAACTCGTGACCGTCTCTTT GAGGATCCTCTTCATGATGGCAAAACCATGCTCAAGATTTGGAACTTGAACAAGTACACT GGAGTTATTGGAGCATTCAACTGTCAAGGAGGAGGATGGTGCAGAGAAACCAGACGTAAC CAATGTTTCTCTGAATGCGTCAACACGTTAACCGCCACCACAAGCCCTAAAGACGTTGAA TGGAACAGTGGAAGCAGCCCAATCTCCATTGCAAACGTTGAAGAGTTTGCTTTGTTCTTG TCTCAATCCAAGAAGCTTTTGTTGTCTGGACTAAACGATGATCTTGAGCTGACTTTGGAG CCTTTCAAGTTTGAGCTGATCACTGTCTCTCCTGTTGTGACCATTGAGGGTAATTCAGTC CGGTTTGCTCCGATTGGACTGGTTAACATGCTAAACACAAGCGGTGCGATCCGGTCTTTG GTGTATAATGATGAATCTGTTGAGGTCGGAGTTTTTGGTGCCGGAGAGTTTAGGGTTTAT GCATCGAAAAAACCTGTGAGCTGCTTAATTGATGGTGAAGTTGTTGAGTTTGGTTATGAA GACTCAATGGTGATGGTGCAAGTCCCTTGGTCTGGTCCAGATGGTTTGTCTTCTATTCAG TATTTGTTTTAG

Peptide Sequence

PEP ID	AT5G40390.1
PEP Infomation	\| Raffinose synthase family protein \| Chr5:16161720-16165085 FORWARD LENGTH=783 \| 201606
Sequence	MASPCLTKSDSGINGVDFTEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPL DVSAGSFIGFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQI IILDQSGSDSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFR QIVYVHAGDDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDG VHKGVKCLVDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHK FKDYVSPKDQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALPPSTIIRP ELSPGLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEM LCQKYGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFW CTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGP IYISDCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYT GVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEEFALFL SQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGNSVRFAPIGLVNMLNTSGAIRSL VYNDESVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPWSGPDGLSSIQ YLF

Transcript Sequence

Transcript ID	AT5G40390.1
Transcript Infomation	\| Raffinose synthase family protein \| Chr5:16161449-16165453 FORWARD LENGTH=2991 \| 201606
Sequence	CCCACAAATATATCAAAATATATAAAGAAGTAATTAAATTAACAAAAACGAAGAAAGTAT AGGTTTCACTCTCTTACTCATTCCTTACATGTCGACCAATAATTCTATAAGTATCTAATG ACATTTCCTATCTTTCTTTCAATCCATAATCTTATCATATAATCAAATTCGGGAAAGTTT TTAAGTTTCATAAACTCTATAAATTACTCTCTACCATCTTAACCTAAAAAACATTCTCAA TCCTTTGTCCAAAATCTTGCATATCGGCAAAATGGCTTCGCCGTGTTTGACCAAGTCCGA TTCCGGTATCAATGGCGTTGACTTTACCGAAAAATTCCGGTTAGAAGATTCCACTCTCTT AGCCAATGGTCAAGTCGTCTTAACCGATGTTCCGGTTAACGTTACTCTCACCTCTTCACC TTACTTAGTCGACAAAGACGGTGTACCACTCGACGTCTCTGCCGGTTCATTCATCGGGTT TAACCTCGACGGAGAGCCCAAAAGCCACCACGTGGCATCCATCGGAAAACTCAAGAACAT TCGTTTCATGAGCATATTCCGTTTCAAGGTTTGGTGGACTACTCATTGGGTCGGATCAAA CGGACGTGACATCGAGAACGAGACTCAAATCATCATTCTTGATCAATCCGGGTCGGATTC TGGACCCGGATCCGGGTCGGGTCGTCCTTATGTTCTCTTGCTACCTCTTCTTGAAGGCTC CTTCCGTTCATCATTCCAATCCGGAGAAGACGATGACGTGGCGGTCTGTGTCGAATCCGG GTCGACCGAAGTAACCGGGTCGGAGTTTCGTCAGATTGTGTATGTCCATGCCGGGGATGA CCCGTTCAAGCTCGTGAAAGACGCCATGAAAGTGATTAGGGTTCATATGAATACGTTCAA GCTTCTTGAAGAGAAATCGCCGCCGGGAATTGTCGATAAATTCGGGTGGTGCACTTGGGA TGCTTTTTACTTGACGGTGAATCCTGACGGAGTTCATAAAGGTGTTAAGTGTCTCGTCGA CGGTGGTTGTCCTCCGGGATTGGTTCTTATCGACGACGGTTGGCAATCGATTGGACATGA TTCCGATGGTATTGATGTCGAAGGGATGAATATTACCGTCGCCGGTGAACAAATGCCTTG CAGGCTTCTGAAGTTTGAAGAGAACCACAAATTCAAAGACTACGTTTCTCCAAAAGATCA AAACGACGTCGGAATGAAAGCTTTCGTCAGAGATCTGAAAGATGAATTCTCCACCGTTGA TTACATCTACGTTTGGCACGCACTTTGCGGTTACTGGGGAGGTCTCCGTCCTGAAGCTCC GGCTCTGCCGCCGTCGACCATTATCCGGCCCGAGCTCTCTCCAGGACTTAAACTAACAAT GGAAGATCTCGCCGTCGATAAGATCATAGAGACCGGAATCGGATTTGCCTCGCCGGACTT GGCGAAAGAGTTCTACGAAGGTCTTCACTCTCATCTTCAAAACGCCGGTATTGACGGCGT TAAAGTTGATGTCATCCACATATTGGAGATGTTATGCCAGAAATATGGCGGGAGAGTTGA CTTGGCCAAAGCTTACTTCAAGGCGTTAACGTCGTCAGTGAATAAGCATTTTAACGGTAA CGGCGTTATCGCCAGCATGGAGCATTGCAATGACTTTATGTTCCTTGGAACTGAAGCCAT CTCTCTTGGTCGTGTCGGTGATGACTTTTGGTGCACGGATCCATCAGGCGATCCAAACGG TACGTTTTGGCTACAAGGATGTCACATGGTCCACTGTGCATACAACAGTCTCTGGATGGG AAATTTCATTCAGCCTGATTGGGACATGTTTCAGTCCACACATCCTTGTGCTGAGTTCCA TGCTGCTTCTCGGGCCATTTCCGGTGGGCCGATTTACATCAGTGATTGTGTGGGCAAGCA TGATTTTGATCTCTTGAAGCGTCTTGTTTTGCCCAACGGTTCGATTTTGAGGTGTGAGTA CTATGCTCTCCCAACTCGTGACCGTCTCTTTGAGGATCCTCTTCATGATGGCAAAACCAT GCTCAAGATTTGGAACTTGAACAAGTACACTGGAGTTATTGGAGCATTCAACTGTCAAGG AGGAGGATGGTGCAGAGAAACCAGACGTAACCAATGTTTCTCTGAATGCGTCAACACGTT AACCGCCACCACAAGCCCTAAAGACGTTGAATGGAACAGTGGAAGCAGCCCAATCTCCAT TGCAAACGTTGAAGAGTTTGCTTTGTTCTTGTCTCAATCCAAGAAGCTTTTGTTGTCTGG ACTAAACGATGATCTTGAGCTGACTTTGGAGCCTTTCAAGTTTGAGCTGATCACTGTCTC TCCTGTTGTGACCATTGAGGGTAATTCAGTCCGGTTTGCTCCGATTGGACTGGTTAACAT GCTAAACACAAGCGGTGCGATCCGGTCTTTGGTGTATAATGATGAATCTGTTGAGGTCGG AGTTTTTGGTGCCGGAGAGTTTAGGGTTTATGCATCGAAAAAACCTGTGAGCTGCTTAAT TGATGGTGAAGTTGTTGAGTTTGGTTATGAAGACTCAATGGTGATGGTGCAAGTCCCTTG GTCTGGTCCAGATGGTTTGTCTTCTATTCAGTATTTGTTTTAGAGATTTTGAAGGTCCTT ATTTGTTTCCTTCTTAACTCCGTACCGTTCGTTGAGTTTTTGAAAGAACTCCGAGCCGTT TTTTATATGGTTTCTGAGAGTAAACAATTTATGTTGGTTTTTTTTTGTCAAACATTTATG TTGGCTTTTTTATTTGAGGATTTTCTTTTTATCATTGGTAGAATCTTTGTACTGCCATAT TTTCGTATTTATTATAAATGATCTGTTCTTTTCATAATTTGTGACAGAATTGTTATCAAC ATAAATTGTTTTAGTAGTCAATTTTAGTAGTCACTAGTGACCTTTCATTATGTAATCTCT TTTAATTTGTTTTTAAACCTTCGGCTCTCTATGTTGCCGTGTAAATTTTAC