Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G40340.1
CDS Infomation	\| Tudor/PWWP/MBT superfamily protein \| Chr5:16131654-16134680 REVERSE LENGTH=3027 \| 201606
Sequence	ATGGAAATTGAAGTTGTTTTGGGAATCGGAGAAGATGCGGGACCTAAGCCTTGTTCTGCA GAGATTGAATCAGCTGAGAAAACCCTAAAAGATGATGGTGTTGTTCAAGAGAACGGTGTT AGGGTTTCCGACAACGGTGAGAAAAAGTCTGATGTTGTTGTTGATGTTGACGAGAAAAAT GAGAAGAATTTGAACGAATCTGGAGTTATTGAAGATTGTGTTATGAATGGAGTTTCTTCC TTGCTCAAATTGAAGGAAGATGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAG GAAGAAGAAGATGGCGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAGCATGGATACTGTGTAGGAGATTTTGTGTGGGGAAAAATTAAGAATCATCCATGG TGGCCAGGTCAGATTTATGATCCATCAGATGCTTCAGATTTGGCTTTGAAGATAAAGCAA AAAGGGAAATTGCTTGTGGCGTGTTTCGGAGACGGGACATTTGCTTGGTGCGGTGCGTCG CAGTTGAAACCGTTTGCAGAGAGTTTCAAAGAGTGTTCGAAAGTGAGTAATTCGCGGAGT TTTCTAGGTGCAGTGGAAGAGGCGGTTGAAGAAATTGGTAGACATATTGAGCGTGTATTG GTATGTGATTGTGCTGAGGAGAAGAAGCATGAGTTTGATAGTCCTTTAGTTAACAATGCT GGGATTAAAGAAGGTGTTTTGGTGCGTGATGTGAGACGGGAAATGATTTCGTCGTTGTTG ATTGGTAAACATGGAGAGATTCTTAAAGATGTTAAGAGTTTTGCAGAGACTGTTAGTTTT AGTGGCTTGCTTGAGCTGGAGATATTGAAAAGGAAGGTATCTGCGTTTTATCGGTCTAAT AGAGGATATGGTTTGACTGAGTATCATGAACCTCAATCAGTTCCAGGACTTGAAGACAAG AACAATGATGATGATGATGATGATGAAGAAAAGAATGTTAATGATGGGTTACAATGGCGT GCTAAACGGTCTAGAGTAGAAGAAGTAGCAGCTTTGGATCATGAAGAGTCGTCGTCTCTT CAGAGATCGTTAGAGAAGTGTTCTGGTTTTCCTGATCATAGGCTTCCCCACAGAAGGAAG GAGAAAAGCATTACTGAAATAATTGAGAAGGAGTCAGCTGCTAAGGTTAGGTTTGAGACA GAACCTGCGGATGGAGATGTAAAGTCAAATGTTAAGTCGGGTAGGAAGAAAACAAAACGC CATGATGAAGTTAATGGTGATCTTGAAAATGTAACTACTACTGCACTGTGGAGGAGAAGA AAGAGTGAAGTAGCTACAATTGAAGACGGTGGTAACAAGCAAGTGGTAGAAAGTAGCAAA GGCAAAACTTCGAGGAAGAAGAAGAAAATGGATGTGGATGATGGCGATGATGATGGGAGT GGAGACAAAGAAGAGTCTGAGGAAAAAGAGATTTCAGATCTGGAAATAAATATCGATTCA ACTTCATTAGCTTCGCTGCGGAAAAAGGTAAGGTTTGATGATTCAGTCGTTGAAAGGAGT ACTGAAAATGGCGAGACCGCTACACAAACATCAAAGAGAGAGAGGAAGAAGAGCAAGTAT CTCTCGCCTGATTTCTTGTCAGATTTTTCACGGAAAGGAAGAAAAAAGAGTACAATCGAA TCTGAATCTTCGAAAGTTTCAAGTCAGAGCCAAGTAGACGAGCGAGTGACTGATGCTAGT GATAGCCTCATGGAAGTGGAAGAAGATACGTTGGATAAACCTTGTGAACCATCATCTGAT AATGGATTAGGTCAAGAAGAACTGTCTAGGGAACTTAGTAATGCCGTCGACTTTCTGAGG TTGGGAGCTACACCAAAGGAAATGCAGGATCTAATTCGTGTAGCTGCTCTTGGCACACAA TATCCAAAAGACAGTAGCTCAAGAGACATGGTAAGAGAATTCATGACCATCTATAGAAGC TTCACATATCATGATGGAGCCAATCACAAGTTCTTAGGGAGCTATGATAGTTCGGATAAA GAAAAGGAAGAACTGAGTGAGATGGGTAAGCCTGTAACTAAGGGGAAAGAGAAGAAAGAT AAGAAGGGTAAAGCAAAGCAGAAAGCAGAGGAGATAGAGGTAACTGGTAAAGAAGAGAAT GAGACAGACAAGCATGGGAAAATGAAGAAAGAGCGAAAACGTAAGAAGTCTGAATCAAAG AAGGAAGGGGGTGAAGGAGAAGAAACCCAGAAAGAGGCTAATGAGTCAACAAAGAAAGAG AGAAAACGTAAGAAGTCTGAATCAAAGAAGCAATCAGATGGAGAAGAAGAAACTCAGAAA GAGCCAAGTGAGTCAACTAAAAAAGAGAGAAAACGTAAGAATCCTGAATCAAAGAAGAAG GCAGAAGCAGTTGAAGAAGAAGAAACCCGGAAAGAGTCTGTTGAATCAACCAAGAAAGAG AGAAAACGGAAGAAGCCTAAACACGACGAAGAAGAAGTCCCGAATGAGACTGAGAAACCC GAGAAGAAGAAGAAAAAGAAGAGAGAGGGAAAGTCTAAAAAGAAAGAAACTGAGACGGAA TTTTCAGGAGCTGAGCTATATGTTACATTTGGTCCTGGTTCAAGTTTGCCTAAAAAGGAA GATCTGATTGAAATATATGAAAAATTTGGAGCTTTGGACAAAGAGAGAACTGATACGGTC GACAACAACTTCTCTGCCCATGTGGCTTTCTTGGATGTAGCTGATGGAGAAAAAGCCTTT GAATCCTCACTAGAGAAATGTCCGTTTACTTCTAATTCGACGGTGAAATTCAGACTCAAG TATCCAAATGAGAGAACAGAGGAGAAGAAAACTGAAGCTGAAGTTGCAGAGACGACAATG GAGGTGGAATATCTGAAGAAAAAGCTGGATGAGATGAAATTGTTACTTGATGGATGCGAA GGAGGAATGACTGAAGAAGTGAAAGTGAAACTTGAAGGTGAGATGGTAAATTTGTTGGAG AAAGTGATAGAGATGAGATCTTCTTAG

Peptide Sequence

PEP ID	AT5G40340.1
PEP Infomation	\| Tudor/PWWP/MBT superfamily protein \| Chr5:16131654-16134680 REVERSE LENGTH=1008 \| 201606
Sequence	MEIEVVLGIGEDAGPKPCSAEIESAEKTLKDDGVVQENGVRVSDNGEKKSDVVVDVDEKN EKNLNESGVIEDCVMNGVSSLLKLKEDVEEEEEEEEEEEEEEEDGEDEEEEEEEEEEEEE EEHGYCVGDFVWGKIKNHPWWPGQIYDPSDASDLALKIKQKGKLLVACFGDGTFAWCGAS QLKPFAESFKECSKVSNSRSFLGAVEEAVEEIGRHIERVLVCDCAEEKKHEFDSPLVNNA GIKEGVLVRDVRREMISSLLIGKHGEILKDVKSFAETVSFSGLLELEILKRKVSAFYRSN RGYGLTEYHEPQSVPGLEDKNNDDDDDDEEKNVNDGLQWRAKRSRVEEVAALDHEESSSL QRSLEKCSGFPDHRLPHRRKEKSITEIIEKESAAKVRFETEPADGDVKSNVKSGRKKTKR HDEVNGDLENVTTTALWRRRKSEVATIEDGGNKQVVESSKGKTSRKKKKMDVDDGDDDGS GDKEESEEKEISDLEINIDSTSLASLRKKVRFDDSVVERSTENGETATQTSKRERKKSKY LSPDFLSDFSRKGRKKSTIESESSKVSSQSQVDERVTDASDSLMEVEEDTLDKPCEPSSD NGLGQEELSRELSNAVDFLRLGATPKEMQDLIRVAALGTQYPKDSSSRDMVREFMTIYRS FTYHDGANHKFLGSYDSSDKEKEELSEMGKPVTKGKEKKDKKGKAKQKAEEIEVTGKEEN ETDKHGKMKKERKRKKSESKKEGGEGEETQKEANESTKKERKRKKSESKKQSDGEEETQK EPSESTKKERKRKNPESKKKAEAVEEEETRKESVESTKKERKRKKPKHDEEEVPNETEKP EKKKKKKREGKSKKKETETEFSGAELYVTFGPGSSLPKKEDLIEIYEKFGALDKERTDTV DNNFSAHVAFLDVADGEKAFESSLEKCPFTSNSTVKFRLKYPNERTEEKKTEAEVAETTM EVEYLKKKLDEMKLLLDGCEGGMTEEVKVKLEGEMVNLLEKVIEMRSS

Transcript Sequence

Transcript ID	AT5G40340.1
Transcript Infomation	\| Tudor/PWWP/MBT superfamily protein \| Chr5:16131397-16135393 REVERSE LENGTH=3830 \| 201606
Sequence	TCTTTTATTACTCTGCTTATTAGCCGTCTAAGCATATTACAGCTGTCAATCATCGAAAGC ATGTGACGCGTCTCTCTTATTTCATCCCACTCGCGTTCATATACACGTGTTATCTACTCT CTATCCGATTTCCGCCACGTAAGAATCTAGACACTGATGTTCTTATACACATAGCGAGTA AGCTGTATTTTACACTCTCGTAGCTAGTCAGTTTATTGTGATAGCGACACGGCTGATTTA GGGAAATAAATTAAAAACGTTGTCTTATTCCTGGGGCAAAAAAAAGCAGATAAGTAAGCA AAAAAAAAAACTCATTAATTACGAAAGTACCCTTAAATTTCTCCGAAAGGAAATTTTTGC GCCGCGTTTCATCTTCTCTCAAATCAAAATCCAGAGAGAAAAAAAAGAGAGGATTTTTCT CATGAGATTCTGAGAGTGTCTTTGTTCTTCTTACAAAGAAGTGTTTTTTCTTGAAGATTC TTCGGTCGCTGTTCGAAAAGTTGTTGTTTCGTTTCTCTCGGAGCTCAAAATCAGTCGGGA AGAAAAATGGAAATTGAAGTTGTTTTGGGAATCGGAGAAGATGCGGGACCTAAGCCTTGT TCTGCAGAGATTGAATCAGCTGAGAAAACCCTAAAAGATGATGGTGTTGTTCAAGAGAAC GGTGTTAGGGTTTCCGACAACGGTGAGAAAAAGTCTGATGTTGTTGTTGATGTTGACGAG AAAAATGAGAAGAATTTGAACGAATCTGGAGTTATTGAAGATTGTGTTATGAATGGAGTT TCTTCCTTGCTCAAATTGAAGGAAGATGTGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAGGAAGAAGAAGATGGCGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAAGAAGAGCATGGATACTGTGTAGGAGATTTTGTGTGGGGAAAAATTAAGAATCAT CCATGGTGGCCAGGTCAGATTTATGATCCATCAGATGCTTCAGATTTGGCTTTGAAGATA AAGCAAAAAGGGAAATTGCTTGTGGCGTGTTTCGGAGACGGGACATTTGCTTGGTGCGGT GCGTCGCAGTTGAAACCGTTTGCAGAGAGTTTCAAAGAGTGTTCGAAAGTGAGTAATTCG CGGAGTTTTCTAGGTGCAGTGGAAGAGGCGGTTGAAGAAATTGGTAGACATATTGAGCGT GTATTGGTATGTGATTGTGCTGAGGAGAAGAAGCATGAGTTTGATAGTCCTTTAGTTAAC AATGCTGGGATTAAAGAAGGTGTTTTGGTGCGTGATGTGAGACGGGAAATGATTTCGTCG TTGTTGATTGGTAAACATGGAGAGATTCTTAAAGATGTTAAGAGTTTTGCAGAGACTGTT AGTTTTAGTGGCTTGCTTGAGCTGGAGATATTGAAAAGGAAGGTATCTGCGTTTTATCGG TCTAATAGAGGATATGGTTTGACTGAGTATCATGAACCTCAATCAGTTCCAGGACTTGAA GACAAGAACAATGATGATGATGATGATGATGAAGAAAAGAATGTTAATGATGGGTTACAA TGGCGTGCTAAACGGTCTAGAGTAGAAGAAGTAGCAGCTTTGGATCATGAAGAGTCGTCG TCTCTTCAGAGATCGTTAGAGAAGTGTTCTGGTTTTCCTGATCATAGGCTTCCCCACAGA AGGAAGGAGAAAAGCATTACTGAAATAATTGAGAAGGAGTCAGCTGCTAAGGTTAGGTTT GAGACAGAACCTGCGGATGGAGATGTAAAGTCAAATGTTAAGTCGGGTAGGAAGAAAACA AAACGCCATGATGAAGTTAATGGTGATCTTGAAAATGTAACTACTACTGCACTGTGGAGG AGAAGAAAGAGTGAAGTAGCTACAATTGAAGACGGTGGTAACAAGCAAGTGGTAGAAAGT AGCAAAGGCAAAACTTCGAGGAAGAAGAAGAAAATGGATGTGGATGATGGCGATGATGAT GGGAGTGGAGACAAAGAAGAGTCTGAGGAAAAAGAGATTTCAGATCTGGAAATAAATATC GATTCAACTTCATTAGCTTCGCTGCGGAAAAAGGTAAGGTTTGATGATTCAGTCGTTGAA AGGAGTACTGAAAATGGCGAGACCGCTACACAAACATCAAAGAGAGAGAGGAAGAAGAGC AAGTATCTCTCGCCTGATTTCTTGTCAGATTTTTCACGGAAAGGAAGAAAAAAGAGTACA ATCGAATCTGAATCTTCGAAAGTTTCAAGTCAGAGCCAAGTAGACGAGCGAGTGACTGAT GCTAGTGATAGCCTCATGGAAGTGGAAGAAGATACGTTGGATAAACCTTGTGAACCATCA TCTGATAATGGATTAGGTCAAGAAGAACTGTCTAGGGAACTTAGTAATGCCGTCGACTTT CTGAGGTTGGGAGCTACACCAAAGGAAATGCAGGATCTAATTCGTGTAGCTGCTCTTGGC ACACAATATCCAAAAGACAGTAGCTCAAGAGACATGGTAAGAGAATTCATGACCATCTAT AGAAGCTTCACATATCATGATGGAGCCAATCACAAGTTCTTAGGGAGCTATGATAGTTCG GATAAAGAAAAGGAAGAACTGAGTGAGATGGGTAAGCCTGTAACTAAGGGGAAAGAGAAG AAAGATAAGAAGGGTAAAGCAAAGCAGAAAGCAGAGGAGATAGAGGTAACTGGTAAAGAA GAGAATGAGACAGACAAGCATGGGAAAATGAAGAAAGAGCGAAAACGTAAGAAGTCTGAA TCAAAGAAGGAAGGGGGTGAAGGAGAAGAAACCCAGAAAGAGGCTAATGAGTCAACAAAG AAAGAGAGAAAACGTAAGAAGTCTGAATCAAAGAAGCAATCAGATGGAGAAGAAGAAACT CAGAAAGAGCCAAGTGAGTCAACTAAAAAAGAGAGAAAACGTAAGAATCCTGAATCAAAG AAGAAGGCAGAAGCAGTTGAAGAAGAAGAAACCCGGAAAGAGTCTGTTGAATCAACCAAG AAAGAGAGAAAACGGAAGAAGCCTAAACACGACGAAGAAGAAGTCCCGAATGAGACTGAG AAACCCGAGAAGAAGAAGAAAAAGAAGAGAGAGGGAAAGTCTAAAAAGAAAGAAACTGAG ACGGAATTTTCAGGAGCTGAGCTATATGTTACATTTGGTCCTGGTTCAAGTTTGCCTAAA AAGGAAGATCTGATTGAAATATATGAAAAATTTGGAGCTTTGGACAAAGAGAGAACTGAT ACGGTCGACAACAACTTCTCTGCCCATGTGGCTTTCTTGGATGTAGCTGATGGAGAAAAA GCCTTTGAATCCTCACTAGAGAAATGTCCGTTTACTTCTAATTCGACGGTGAAATTCAGA CTCAAGTATCCAAATGAGAGAACAGAGGAGAAGAAAACTGAAGCTGAAGTTGCAGAGACG ACAATGGAGGTGGAATATCTGAAGAAAAAGCTGGATGAGATGAAATTGTTACTTGATGGA TGCGAAGGAGGAATGACTGAAGAAGTGAAAGTGAAACTTGAAGGTGAGATGGTAAATTTG TTGGAGAAAGTGATAGAGATGAGATCTTCTTAGGATTATGATTTTATGTTTTTATTTTGT TGGTTGAGAACTTTCAGGACAGGTTTTAGGATATTTATGGTTTCTGCAAAACATAACAAA AGTATTTTGAGAGGTTAATGTCTTGGTGATACTATGATCTTGTCGTAGGGTAGACAGAAT TAGATCGATGTTCTATGTTTTTGTGTAGACTTTTTTAAAGTTTACCAACTTTGATACTAA ACCCATTAGTGGGCTTTTGGTTTATCACTCTCTTGAAAGCCCACTAATTT