Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G40140.1
CDS Infomation	\| RING/U-box superfamily protein with ARM repeat domain-containing protein \| Chr5:16057347-16058999 FORWARD LENGTH=1653 \| 201606
Sequence	ATGGAGATTCAACGACCAGTCATCAATCTCATGGTTCTTCACTCACAACACGACAAAAGT GACAACCTTTCCCGACGAGAATCTCTCGCCGGTAAATCCAAATGGAGAACCTCCTTATCC CGTTCTTCTTCATCTTCTTCATCAAACAACAATTCTCCGACCAAAACAGAGATTCCGGCA GAGTTTCTCTGTCCGATCTCAGGTTCTTTAATGGCTGACCCAATCATAGTCTCTTCCGGT CACTCCTACGAAAGAGCTTGCGTCATAGCTTGTAAAACCCTAGGCTTTACTCCAACCCCA CCTCCAGATTTCTCCACCGTGATACCAAATCTCGCTTTAAAATCCGCAATTCACAGCTGG TGTGAACGGCGGTGTTTTCCACCGCCGAAGCCACTCAACTCCGCCGCCGCGGAGAAGCTT ATACTCGCATTAATGGAGAAAAAACCACAAAGAAGAAAAGTATCTGTTTCAGAGAAAGAG CTTATCCAAGCTATTAGAGATAAACCATCAGTGAGACTTAACCACGCCGCGACGGAGCTT GATCGGAGACCTAATTACTTCAACTCAAGCTCCGATGAGTCAATAGCTTCTTCAAGCCGT ACACTACAGTTAACAACTAAACCTAGTTGCTTCTCTTCACCTTCATCTGGAGAAATCGAA TCTTTAGAACCTAACCTAACTCCAGAAGAAGAAGCTTTACTAACAAAGCTAAAAAGTAAT CGAATCTCAGAGATTGAAGAAGCTTTGATTTCGATTCGACGCATCACAAGAATCGATGAA AGTTCAAGAATCAGTTTATGTACAACGAGAGTAATCTCTGCACTTAAGTCACTGATTGTT TCCAGATACGCGACGGTTCAGGTGAATGTCACGGCGGTTCTTGTGAACTTGTCTTTGGAA AAATCTAATAAAGTCAAGATCGTACGGTCAGGAATCGTTCCTCCGTTGATCGACGTTTTG AAATGCGGTTCCGTCGAAGCTCAGGAGCATTCCGCCGGAGTTATCTTCAGTTTAGCTCTT GAAGATGAGAACAAAACGGCGATTGGTGTTCTCGGAGGTTTAGAGCCGTTGCTTCATTTG ATCCGAGTTGGTACTGAGTTAACTCGGCATGACTCGGCTTTAGCTTTGTATCATCTTTCT CTTGTACAGAGTAATAGAGGGAAGCTAGTTAAGCTTGGAGCTGTTCAAATGCTTTTGGGT ATGGTGAGTTTAGGACAGATGATTGGTCGTGTTTTGTTGATTCTTTGTAATATGGCTTCG TGTCCGGTGAGTCGACCAGCTTTGCTTGACTCGGGTGGTGTTGAATGTATGGTTGGGGTT TTGAGAAGAGATAGAGAGGTTAATGAGTCGACTCGGGAGAGCTGTGTTGCGGTTTTGTAT GGGTTGAGTCACGACGGTGGTTTGAGGTTTAAAGGGTTGGCTATGGCGGCGAATGCGGTG GAGGAGTTGGTGAAAGTGGAGAGGAGTGGGAGAGAAAGAGCTAAGCAGAAGGCGAGAAGA GTTTTGGAAGTGTTGAGAGCTAAAATTGAAGATGATGATTTGGTGGAGAATGAGGAGATT GATTGGGAGGAGTTGCTTAATTCCGGTGATGTTAGTCGGAGCCGGTGTCGACTCGGTGGT GAGAAATCTTGTGTTAACTCGGCCGAGTTTTGA

Peptide Sequence

PEP ID	AT5G40140.1
PEP Infomation	\| RING/U-box superfamily protein with ARM repeat domain-containing protein \| Chr5:16057347-16058999 FORWARD LENGTH=550 \| 201606
Sequence	MEIQRPVINLMVLHSQHDKSDNLSRRESLAGKSKWRTSLSRSSSSSSSNNNSPTKTEIPA EFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPDFSTVIPNLALKSAIHSW CERRCFPPPKPLNSAAAEKLILALMEKKPQRRKVSVSEKELIQAIRDKPSVRLNHAATEL DRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSPSSGEIESLEPNLTPEEEALLTKLKSN RISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLE KSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHL IRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIGRVLLILCNMAS CPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAV EELVKVERSGRERAKQKARRVLEVLRAKIEDDDLVENEEIDWEELLNSGDVSRSRCRLGG EKSCVNSAEF

Transcript Sequence

Transcript ID	AT5G40140.1
Transcript Infomation	\| RING/U-box superfamily protein with ARM repeat domain-containing protein \| Chr5:16057079-16059303 FORWARD LENGTH=2225 \| 201606
Sequence	CTTCTCTTTACCTACCAAAAAAACCAAACCCTTGATTTTTAGTTTTTTACATCATAACAA CTAAATAATGATAATAGAACAACATGACCAAGTCCATACTTCTTCTAAACAATAAAATCT CCCTCCCAAAAATCTCTCATTTACAGTTTCCTCAAATCTCTCCCACAAAAATCTCATCTT TCAAGGTTTCAAGATCATTCATGGGTCTTCTTCTTCTTCAACAAGAAATCAACTTTCCCC AATTCCACTCTGAAAAATCCAATCTTTAATGGAGATTCAACGACCAGTCATCAATCTCAT GGTTCTTCACTCACAACACGACAAAAGTGACAACCTTTCCCGACGAGAATCTCTCGCCGG TAAATCCAAATGGAGAACCTCCTTATCCCGTTCTTCTTCATCTTCTTCATCAAACAACAA TTCTCCGACCAAAACAGAGATTCCGGCAGAGTTTCTCTGTCCGATCTCAGGTTCTTTAAT GGCTGACCCAATCATAGTCTCTTCCGGTCACTCCTACGAAAGAGCTTGCGTCATAGCTTG TAAAACCCTAGGCTTTACTCCAACCCCACCTCCAGATTTCTCCACCGTGATACCAAATCT CGCTTTAAAATCCGCAATTCACAGCTGGTGTGAACGGCGGTGTTTTCCACCGCCGAAGCC ACTCAACTCCGCCGCCGCGGAGAAGCTTATACTCGCATTAATGGAGAAAAAACCACAAAG AAGAAAAGTATCTGTTTCAGAGAAAGAGCTTATCCAAGCTATTAGAGATAAACCATCAGT GAGACTTAACCACGCCGCGACGGAGCTTGATCGGAGACCTAATTACTTCAACTCAAGCTC CGATGAGTCAATAGCTTCTTCAAGCCGTACACTACAGTTAACAACTAAACCTAGTTGCTT CTCTTCACCTTCATCTGGAGAAATCGAATCTTTAGAACCTAACCTAACTCCAGAAGAAGA AGCTTTACTAACAAAGCTAAAAAGTAATCGAATCTCAGAGATTGAAGAAGCTTTGATTTC GATTCGACGCATCACAAGAATCGATGAAAGTTCAAGAATCAGTTTATGTACAACGAGAGT AATCTCTGCACTTAAGTCACTGATTGTTTCCAGATACGCGACGGTTCAGGTGAATGTCAC GGCGGTTCTTGTGAACTTGTCTTTGGAAAAATCTAATAAAGTCAAGATCGTACGGTCAGG AATCGTTCCTCCGTTGATCGACGTTTTGAAATGCGGTTCCGTCGAAGCTCAGGAGCATTC CGCCGGAGTTATCTTCAGTTTAGCTCTTGAAGATGAGAACAAAACGGCGATTGGTGTTCT CGGAGGTTTAGAGCCGTTGCTTCATTTGATCCGAGTTGGTACTGAGTTAACTCGGCATGA CTCGGCTTTAGCTTTGTATCATCTTTCTCTTGTACAGAGTAATAGAGGGAAGCTAGTTAA GCTTGGAGCTGTTCAAATGCTTTTGGGTATGGTGAGTTTAGGACAGATGATTGGTCGTGT TTTGTTGATTCTTTGTAATATGGCTTCGTGTCCGGTGAGTCGACCAGCTTTGCTTGACTC GGGTGGTGTTGAATGTATGGTTGGGGTTTTGAGAAGAGATAGAGAGGTTAATGAGTCGAC TCGGGAGAGCTGTGTTGCGGTTTTGTATGGGTTGAGTCACGACGGTGGTTTGAGGTTTAA AGGGTTGGCTATGGCGGCGAATGCGGTGGAGGAGTTGGTGAAAGTGGAGAGGAGTGGGAG AGAAAGAGCTAAGCAGAAGGCGAGAAGAGTTTTGGAAGTGTTGAGAGCTAAAATTGAAGA TGATGATTTGGTGGAGAATGAGGAGATTGATTGGGAGGAGTTGCTTAATTCCGGTGATGT TAGTCGGAGCCGGTGTCGACTCGGTGGTGAGAAATCTTGTGTTAACTCGGCCGAGTTTTG ACGTGTCATTTTTTAACTCGTTACTTTTGTTTTAGTTTTAATTGTGGGTTTTGCGACTTT TTCTTTTTTTCTTTTTAAATTTCTAAATAATAGAGTAGGGGATTGTAATTAGTTGGAGAT GAGTTTTTTTTTTTTTTTTTTGTGAATTTTTATGGTTGGGTGGATTCTTGAATTATTTGG CAATTTGGGTGGCTTTTCTTTTTGTTAATTCCATCCTTTTTCTTCGTATTATCTTTTTGC TTTTATAAAATTTAGAAAACGAACAATGAAAAAGATTGAAAAGAAAACTAATGGAGGACT TTTAA