Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G39680.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:15884236-15886368 REVERSE LENGTH=2133 \| 201606
Sequence	ATGTCAGCCTTGTCTGTGATCGAACAACGATTGTTAAAGTGGGACAAGCTCGCGTCTTTA GTACCCAAATCAAAAAAAACTCCTTTTCCGATTGATCGTCTAAACGAGCTTTTGAAAGTC TGTGCTAATTCAAGTTATCTAAGAATTGGAGAATCGATTCACGCTCATTTGATTGTTACC AACCAATCATCTAGAGCTGAAGACGCGTATCAGATCAATTCTCTGATCAATCTCTATGTG AAATGCAGAGAAACTGTTCGTGCACGCAAGCTGTTCGATTTAATGCCTGAGAGAAATGTT GTTTCTTGGTGTGCGATGATGAAGGGATATCAAAATTCTGGGTTTGATTTTGAAGTTTTG AAGCTTTTTAAAAGTATGTTTTTTTCTGGTGAATCGAGACCTAATGAGTTTGTAGCTACT GTGGTTTTTAAGTCTTGTTCAAACTCTGGGAGGATTGAAGAAGGTAAACAGTTTCATGGA TGTTTTCTTAAGTATGGTTTGATTTCTCATGAGTTTGTACGGAACACTCTTGTTTACATG TATTCTTTGTGTTCGGGGAATGGCGAGGCTATACGAGTTTTGGATGATCTTCCTTATTGT GATCTTTCTGTGTTTAGTTCTGCTCTTAGTGGTTATCTAGAGTGTGGTGCTTTTAAAGAA GGGCTTGATGTTTTGAGAAAGACAGCTAACGAAGATTTTGTTTGGAACAACCTCACGTAT TTGTCTTCTTTACGGCTTTTCTCCAATCTCAGAGATTTGAATTTGGCTCTGCAGGTTCAT AGCCGAATGGTGAGGTTTGGTTTCAACGCTGAAGTTGAGGCTTGTGGTGCACTCATTAAT ATGTATGGCAAATGTGGTAAAGTCCTTTATGCTCAGAGAGTTTTCGATGATACACACGCT CAAAACATTTTCTTGAATACAACGATCATGGATGCTTACTTCCAGGATAAGTCTTTCGAG GAGGCTCTGAATCTGTTTTCAAAGATGGATACTAAAGAGGTTCCACCAAATGAGTACACC TTTGCTATTTTGCTGAATTCAATTGCAGAGCTATCGCTTCTAAAACAGGGCGATCTTCTA CATGGACTTGTTTTGAAATCCGGCTATAGGAACCATGTAATGGTAGGCAATGCATTGGTT AACATGTACGCCAAAAGTGGCAGCATTGAGGATGCAAGGAAAGCATTCTCAGGCATGACT TTTAGAGATATAGTTACTTGGAACACAATGATATCTGGATGCTCACATCATGGATTGGGG AGGGAAGCGCTTGAAGCCTTTGATAGAATGATTTTTACAGGAGAGATTCCCAACCGCATA ACTTTTATCGGCGTTTTGCAGGCTTGTAGCCATATTGGTTTTGTGGAGCAAGGGCTTCAT TACTTTAATCAGCTGATGAAGAAATTTGATGTCCAGCCTGATATACAGCATTATACATGC ATTGTTGGACTTTTGAGCAAGGCTGGAATGTTCAAGGATGCTGAGGATTTCATGAGAACA GCTCCAATTGAATGGGATGTTGTTGCATGGAGAACTTTGCTAAATGCTTGTTATGTTCGC CGGAATTACAGGTTAGGAAAAAAAGTAGCAGAATATGCCATTGAGAAGTATCCAAACGAC TCAGGAGTTTACGTATTGTTATCCAATATCCACGCCAAGTCAAGGGAGTGGGAAGGTGTG GCAAAAGTGCGTTCTTTGATGAATAACAGAGGTGTTAAGAAGGAGCCTGGAGTAAGCTGG ATAGGGATACGTAATCAAACCCATGTGTTTCTTGCAGAGGATAATCAACACCCCGAGATT ACGCTGATTTATGCAAAGGTTAAGGAAGTTATGTCGAAGATTAAACCATTAGGGTATTCG CCTGATGTTGCTGGAGCTTTCCATGATGTCGATGAAGAACAGAGAGAAGATAACCTCTCT TATCATAGTGAGAAGCTAGCTGTGGCATATGGTCTGATAAAAACGCCAGAGAAATCACCA TTGTACGTGACTAAAAACGTGAGGATATGTGATGATTGTCACTCTGCAATTAAGCTTATC TCGAAGATCTCAAAACGATACATAGTTATCAGAGATTCCAATCGGTTCCATCATTTCCTA GATGGTCAGTGTTCTTGCTGTGATTACTGGTGA

Peptide Sequence

PEP ID	AT5G39680.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:15884236-15886368 REVERSE LENGTH=710 \| 201606
Sequence	MSALSVIEQRLLKWDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVT NQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVL KLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYM YSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTY LSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHA QNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPND SGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEI TLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSP LYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW

Transcript Sequence

Transcript ID	AT5G39680.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:15884001-15886449 REVERSE LENGTH=2388 \| 201606
Sequence	AAAATATCAATTTTGGCGCCATGTCAGCCTTGTCTGTGATCGAACAACGATTGTTAAAGT GGGACAAGCTCGCGTCTTTAGTACCCAAATCAAAAAAAACTCCTTTTCCGATTGATCGTC TAAACGAGCTTTTGAAAGTCTGTGCTAATTCAAGTTATCTAAGAATTGGAGAATCGATTC ACGCTCATTTGATTGTTACCAACCAATCATCTAGAGCTGAAGACGCGTATCAGATCAATT CTCTGATCAATCTCTATGTGAAATGCAGAGAAACTGTTCGTGCACGCAAGCTGTTCGATT TAATGCCTGAGAGAAATGTTGTTTCTTGGTGTGCGATGATGAAGGGATATCAAAATTCTG GGTTTGATTTTGAAGTTTTGAAGCTTTTTAAAAGTATGTTTTTTTCTGGTGAATCGAGAC CTAATGAGTTTGTAGCTACTGTGGTTTTTAAGTCTTGTTCAAACTCTGGGAGGATTGAAG AAGGTAAACAGTTTCATGGATGTTTTCTTAAGTATGGTTTGATTTCTCATGAGTTTGTAC GGAACACTCTTGTTTACATGTATTCTTTGTGTTCGGGGAATGGCGAGGCTATACGAGTTT TGGATGATCTTCCTTATTGTGATCTTTCTGTGTTTAGTTCTGCTCTTAGTGGTTATCTAG AGTGTGGTGCTTTTAAAGAAGGGCTTGATGTTTTGAGAAAGACAGCTAACGAAGATTTTG TTTGGAACAACCTCACGTATTTGTCTTCTTTACGGCTTTTCTCCAATCTCAGAGATTTGA ATTTGGCTCTGCAGGTTCATAGCCGAATGGTGAGGTTTGGTTTCAACGCTGAAGTTGAGG CTTGTGGTGCACTCATTAATATGTATGGCAAATGTGGTAAAGTCCTTTATGCTCAGAGAG TTTTCGATGATACACACGCTCAAAACATTTTCTTGAATACAACGATCATGGATGCTTACT TCCAGGATAAGTCTTTCGAGGAGGCTCTGAATCTGTTTTCAAAGATGGATACTAAAGAGG TTCCACCAAATGAGTACACCTTTGCTATTTTGCTGAATTCAATTGCAGAGCTATCGCTTC TAAAACAGGGCGATCTTCTACATGGACTTGTTTTGAAATCCGGCTATAGGAACCATGTAA TGGTAGGCAATGCATTGGTTAACATGTACGCCAAAAGTGGCAGCATTGAGGATGCAAGGA AAGCATTCTCAGGCATGACTTTTAGAGATATAGTTACTTGGAACACAATGATATCTGGAT GCTCACATCATGGATTGGGGAGGGAAGCGCTTGAAGCCTTTGATAGAATGATTTTTACAG GAGAGATTCCCAACCGCATAACTTTTATCGGCGTTTTGCAGGCTTGTAGCCATATTGGTT TTGTGGAGCAAGGGCTTCATTACTTTAATCAGCTGATGAAGAAATTTGATGTCCAGCCTG ATATACAGCATTATACATGCATTGTTGGACTTTTGAGCAAGGCTGGAATGTTCAAGGATG CTGAGGATTTCATGAGAACAGCTCCAATTGAATGGGATGTTGTTGCATGGAGAACTTTGC TAAATGCTTGTTATGTTCGCCGGAATTACAGGTTAGGAAAAAAAGTAGCAGAATATGCCA TTGAGAAGTATCCAAACGACTCAGGAGTTTACGTATTGTTATCCAATATCCACGCCAAGT CAAGGGAGTGGGAAGGTGTGGCAAAAGTGCGTTCTTTGATGAATAACAGAGGTGTTAAGA AGGAGCCTGGAGTAAGCTGGATAGGGATACGTAATCAAACCCATGTGTTTCTTGCAGAGG ATAATCAACACCCCGAGATTACGCTGATTTATGCAAAGGTTAAGGAAGTTATGTCGAAGA TTAAACCATTAGGGTATTCGCCTGATGTTGCTGGAGCTTTCCATGATGTCGATGAAGAAC AGAGAGAAGATAACCTCTCTTATCATAGTGAGAAGCTAGCTGTGGCATATGGTCTGATAA AAACGCCAGAGAAATCACCATTGTACGTGACTAAAAACGTGAGGATATGTGATGATTGTC ACTCTGCAATTAAGCTTATCTCGAAGATCTCAAAACGATACATAGTTATCAGAGATTCCA ATCGGTTCCATCATTTCCTAGATGGTCAGTGTTCTTGCTGTGATTACTGGTGAAGCTATA AACCAAAGGTTGAATTATAGAGTGATGGAGAGCTCTTGCACCTCTATTGCGGCCTCACGA GCTTCAGTTATTGTAAGTAGTACTAAAATAAGTTGCATCATTTTTTGAGATCCCTTTAGT CATCAATCTCTAGGTGTAAATAGTGTATAATAACACCTTTTGGCAGATTATTCATGTCTG TGACAATTATTTCCAAACTCATTGGTTTTTACGCTCTATAGCAGAGCT