Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G39040.1
CDS Infomation	\| transporter associated with antigen processing protein 2 \| Chr5:15625660-15629621 FORWARD LENGTH=1935 \| 201606
Sequence	ATGGGCAACAAGAAACTGTTGACTGGTGGGTCAAGCAAAACTCATGGTAGTGGTAGTAGC TACAGAGATCCTCTGTTGCAGAATCAGGAGGATAAACCGAAAGCGAATGGAAGCGAGAAT GGTTTGAATGATCTTGAGCATGGTGTAGTTGAGGCGGCAAATGTTGGATTTGGCAGAGTC TTTGCGTTGGCAAAGCCCGATGCGGGAAAGCTAGTGATTGGTACCATTGCTTTGTTGATA GGTTCAACAACTAATCTCCTTGTTCCAAAGTTTGGTGGGATGATTATAGACATTGTATCC AGAGATGTCAAGACGCCTGAGCAGCAAACGGAATCCTTGATTGCTGTTAGAAACGCCGTA GTAATCATTTTGCTTATCGTTGTAATCGGATCGATATGCACGGCTTTGCGAGCGTGGCTA TTTAATTCTGCCAGTGAAAGAGTTGTGGCTCGACTGAGAAAGGATTTGTTCAGACACCTA ATGCATCAGGAAATAGCATTTTATGATGTCACAAAAACCGGAGAACTCTTAAGTAGATTA TCCGAAGACACCCAGATCATAAAAAACGCTGCTACTACAAATCTTTCTGAAGCTCTTCGT AACGTAACAACTGCGCTTATAGGAGTTGGTTTCATGTTTACATCATCTTGGAAATTAACA TTGTTGGCGTTAGTAGTAGTTCCGGTAATTTCAGTTGCTGTGAAACAGTTTGGTCGCTAT CTACGTGAACTTTCACACACAACTCAAGCTGCAGCTGCTGTTGCTGCATCAATTGCTGAG GAATCTTTTGGTGCAGTCCGAACTGTTAGATCGTTTGCGAAAGAAAGCTATATGGTATCA CAATATTCCAAGAAAGTCGATGAGACTCTGAAGCTAGGACTCAAACAAGCTGTACTTGTC GGGTTGTTCTTCGGAGGACTAAACGCAGCTTTCACATTATCTGTTATTACGGTTGTTAGT TATGGAGCATACTTAACAATATATGGTTCCATGACCGTTGGAGCACTCACTTCCTTCATT CTTTATAGCCTCACAGTTGGTTCATCGGTATCTTCTTTATCGAGTTTGTACACAACTGCA ATGAAAGCTGCAGGCGCTAGTAGACGAGTTTTTCAGATCTTGGACCGTGTTTCTAGCATG TCAAGTTCAGGGGATAAGTGTCCAGTCGGTAATCCTGATGGAGATGTGGAATTAAATGAT GTCTGGTTTGCTTATCCTTCTCGTCCTAGTCACATGATACTCAAGGGAATATCGTTGAGG TTGACACCAGGCTCAAAAGTTGCACTAGTAGGACCAAGCGGTGGAGGAAAAACGACCATA GCTAATTTGATTGAGAGATTCTATGATCCTCTCAAGGGAAAGATTTTGCTTAATGGAGTT TCTTTGATGGAAATATCCCATCAATACCTTCACAAACAGATCAGCATTGTAAGTCAGGAA CCAATTCTTTTCAACTGTTCAGTGGAAGAGAACATCGCATATGGATTTGACGGTGAAGCT AGTTTTACCGATATAGAAAATGCAGCGAAAATGGCGAATGCACACGAGTTCATTGAAGCG TTTCCGGATAAGTACAACACTGTTGTAGGAGAACGTGGATTACGGCTCTCAGGAGGACAG AAGCAAAGGATTGCAATCGCGAGGGCGCTTCTTACAAACCCGAGTGTTTTGCTCCTTGAT GAAGCCACGAGTGCACTCGACGCTGAAAGCGAATATCTTGTTCAGGATGCGATGGACTCG TTAATGGCGGGAAGAACGGTGTTGGTGATAGCTCATAGGTTATCGACGGTCAAGACTGCA GACTGTGTGGCGGTTATATCAGATGGTGAGGTGGCTGAGAAAGGCACTCATGATGAGCTT CTCAGCCTTAATGGAATCTACACAAATCTTGTCAAGAGGCAGCTTCAGAGTTCTTCCTCT GTTACCACCTTGTGA

Peptide Sequence

PEP ID	AT5G39040.1
PEP Infomation	\| transporter associated with antigen processing protein 2 \| Chr5:15625660-15629621 FORWARD LENGTH=644 \| 201606
Sequence	MGNKKLLTGGSSKTHGSGSSYRDPLLQNQEDKPKANGSENGLNDLEHGVVEAANVGFGRV FALAKPDAGKLVIGTIALLIGSTTNLLVPKFGGMIIDIVSRDVKTPEQQTESLIAVRNAV VIILLIVVIGSICTALRAWLFNSASERVVARLRKDLFRHLMHQEIAFYDVTKTGELLSRL SEDTQIIKNAATTNLSEALRNVTTALIGVGFMFTSSWKLTLLALVVVPVISVAVKQFGRY LRELSHTTQAAAAVAASIAEESFGAVRTVRSFAKESYMVSQYSKKVDETLKLGLKQAVLV GLFFGGLNAAFTLSVITVVSYGAYLTIYGSMTVGALTSFILYSLTVGSSVSSLSSLYTTA MKAAGASRRVFQILDRVSSMSSSGDKCPVGNPDGDVELNDVWFAYPSRPSHMILKGISLR LTPGSKVALVGPSGGGKTTIANLIERFYDPLKGKILLNGVSLMEISHQYLHKQISIVSQE PILFNCSVEENIAYGFDGEASFTDIENAAKMANAHEFIEAFPDKYNTVVGERGLRLSGGQ KQRIAIARALLTNPSVLLLDEATSALDAESEYLVQDAMDSLMAGRTVLVIAHRLSTVKTA DCVAVISDGEVAEKGTHDELLSLNGIYTNLVKRQLQSSSSVTTL

Transcript Sequence

Transcript ID	AT5G39040.1
Transcript Infomation	\| transporter associated with antigen processing protein 2 \| Chr5:15625460-15629835 FORWARD LENGTH=2349 \| 201606
Sequence	ACTCTTGACCTTAACTTAAATTTAGATTTCATTTGATACTAATTAAACTATTCCCTAAAT TACCAGGAAGTAACCAAATTGTGGAGAGAACAAAAACACCAATTCGATATTTTCATTCAT GGCTTAGAAAATAAGAATCCTCTAAGTTCTCCTCTCTATTGAAAACCCAAAACAAAAGTT GAGAACTTTTCATATTTCAGATGGGCAACAAGAAACTGTTGACTGGTGGGTCAAGCAAAA CTCATGGTAGTGGTAGTAGCTACAGAGATCCTCTGTTGCAGAATCAGGAGGATAAACCGA AAGCGAATGGAAGCGAGAATGGTTTGAATGATCTTGAGCATGGTGTAGTTGAGGCGGCAA ATGTTGGATTTGGCAGAGTCTTTGCGTTGGCAAAGCCCGATGCGGGAAAGCTAGTGATTG GTACCATTGCTTTGTTGATAGGTTCAACAACTAATCTCCTTGTTCCAAAGTTTGGTGGGA TGATTATAGACATTGTATCCAGAGATGTCAAGACGCCTGAGCAGCAAACGGAATCCTTGA TTGCTGTTAGAAACGCCGTAGTAATCATTTTGCTTATCGTTGTAATCGGATCGATATGCA CGGCTTTGCGAGCGTGGCTATTTAATTCTGCCAGTGAAAGAGTTGTGGCTCGACTGAGAA AGGATTTGTTCAGACACCTAATGCATCAGGAAATAGCATTTTATGATGTCACAAAAACCG GAGAACTCTTAAGTAGATTATCCGAAGACACCCAGATCATAAAAAACGCTGCTACTACAA ATCTTTCTGAAGCTCTTCGTAACGTAACAACTGCGCTTATAGGAGTTGGTTTCATGTTTA CATCATCTTGGAAATTAACATTGTTGGCGTTAGTAGTAGTTCCGGTAATTTCAGTTGCTG TGAAACAGTTTGGTCGCTATCTACGTGAACTTTCACACACAACTCAAGCTGCAGCTGCTG TTGCTGCATCAATTGCTGAGGAATCTTTTGGTGCAGTCCGAACTGTTAGATCGTTTGCGA AAGAAAGCTATATGGTATCACAATATTCCAAGAAAGTCGATGAGACTCTGAAGCTAGGAC TCAAACAAGCTGTACTTGTCGGGTTGTTCTTCGGAGGACTAAACGCAGCTTTCACATTAT CTGTTATTACGGTTGTTAGTTATGGAGCATACTTAACAATATATGGTTCCATGACCGTTG GAGCACTCACTTCCTTCATTCTTTATAGCCTCACAGTTGGTTCATCGGTATCTTCTTTAT CGAGTTTGTACACAACTGCAATGAAAGCTGCAGGCGCTAGTAGACGAGTTTTTCAGATCT TGGACCGTGTTTCTAGCATGTCAAGTTCAGGGGATAAGTGTCCAGTCGGTAATCCTGATG GAGATGTGGAATTAAATGATGTCTGGTTTGCTTATCCTTCTCGTCCTAGTCACATGATAC TCAAGGGAATATCGTTGAGGTTGACACCAGGCTCAAAAGTTGCACTAGTAGGACCAAGCG GTGGAGGAAAAACGACCATAGCTAATTTGATTGAGAGATTCTATGATCCTCTCAAGGGAA AGATTTTGCTTAATGGAGTTTCTTTGATGGAAATATCCCATCAATACCTTCACAAACAGA TCAGCATTGTAAGTCAGGAACCAATTCTTTTCAACTGTTCAGTGGAAGAGAACATCGCAT ATGGATTTGACGGTGAAGCTAGTTTTACCGATATAGAAAATGCAGCGAAAATGGCGAATG CACACGAGTTCATTGAAGCGTTTCCGGATAAGTACAACACTGTTGTAGGAGAACGTGGAT TACGGCTCTCAGGAGGACAGAAGCAAAGGATTGCAATCGCGAGGGCGCTTCTTACAAACC CGAGTGTTTTGCTCCTTGATGAAGCCACGAGTGCACTCGACGCTGAAAGCGAATATCTTG TTCAGGATGCGATGGACTCGTTAATGGCGGGAAGAACGGTGTTGGTGATAGCTCATAGGT TATCGACGGTCAAGACTGCAGACTGTGTGGCGGTTATATCAGATGGTGAGGTGGCTGAGA AAGGCACTCATGATGAGCTTCTCAGCCTTAATGGAATCTACACAAATCTTGTCAAGAGGC AGCTTCAGAGTTCTTCCTCTGTTACCACCTTGTGAGATAATATCATTCTTCTGACTACAA CAACAAAAAGAAGAAATCATCATTCCATTCGAAGACTAAATTTGTATAATTTGAGTTTGA ACCCTTTCAATGCACTAGAGAGTTCTCTGACATAAAATTGTAATGAGACATTTCAATTCA GTTATCTAATAAAAATAAATATGAGCCATTGAGAATGTTCGTCTAGTCTTGTGTTGTTGG AGATGAGAG