Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G38550.1
CDS Infomation	\| Mannose-binding lectin superfamily protein \| Chr5:15432965-15435421 REVERSE LENGTH=1785 \| 201606
Sequence	ATGATCCAAAAGTTGGGAGCGAAAGGAATCAAGTCAGATGAACGTAATCAGCGGGAGTGG GATGATGGATCTGAACATGATGATGTAACAAAGATATACGTACGAGGTGGTCGTGAAGGA ATAAGATCCATTTATTTCAACTATGTGAAGAATGGAAAACCCAAAGATGGATCAATCCAT GGTTACTTTGACTCTGGTTTCACACAAACGTTTGAGATTAACCATCTACGAGGTGAATAT CTTGAATCTGTTGACGCTTACTACGACAAAAAGTCCTACGGTATGCAAGCAATTCAATTC AAAACTAACTTCAGGACTTCTGAACTGATGGGGTATAGTTATGAGTGTACTATGTTTACG CTAGCCGTCCAAGGAAAGAAGATCATTGGATTTCATGGATCTAATTATGTACATATATTA TCTCTTGGAGCTTACTTCATTTCCATTGCTCCTACGAGATTGGAAGTGAAAGGTAGTAAG GGAAGCAAGAAGTGGGACGATGGATTTGACCATGAAAATGTATCAAAGATCGAGGTACTA GGTGGTTTTGAAGGCATACTGTACATCAAAGTTGACTATATCAAGAATGGAAAACTAGAA ACTGGATTAGTCCATGGTCACTCTGGTGGTGATGGTTTTTTACAGAAGATGGAGATTAAC CAGTCAAAGAACGAATATCTAGTATATGTTGAAGGTTACTACGATGATGCTTCTGAAACC ATTCAAGGGCTTCATTTCCAAACTAACCTCAACAATCCTGTTATGATGGGGTATAAAAAG GGCAGGAAGTTTTTACTTGCATCCAATGGAAATAAGATCATTGGGTTTCATGGATATGCC GACAAAAGCCTAAACTCTCTTGGAGCATATTTCAGTACGACCACTCCTAATAAACTGGAA TGCCAAGGTGATCGTAAAGGACTGCCTTGGGATGATGGTTGTAATTATGACGGCGTAAAA AAGGTGTATGTCGATAGTATAAGTGATATAGATAGTGTCAGGTTTGAGTACGATAATGGC GGAAAAGTGGAAAAGACTCCGTACCGGCGTGATGTTACAAATGAGAAGGAGTTTGTGCTT GACTATCCAAATGAGTTTATCACGTCTGTGGAGGGGACCTTAGCAACTCCGACTAATTTT GACATTACGTGGATTCTCTCACTGACATTCAAAACATCAAAAGGGAGAACCTCTCCAACA TTTGGATCATCGTCTCCTGGTAGAAAATTTGTGCTGGAGAAGAATGGTAGCGCTCTTGTT GGGTTCCATGGATATATTGGTCCTGGTTATAATATTAAAGCTCTTGGAGCATATTATCGC CCGATTCCTCCTACTCCTGATGTGAAAAGACTAGAAGCACAAGGTGGTGATGGAGGAGCT TCTTGGGATGATGGTGGTACTTTCAACAGTGTTAGAAAGATCTACATTGGACTAGGCAAA AACGTTGTAGGCTTTGTCAAGTTTTTGTACTACAAAAACGCTCGTGTTGTCATCGGAGAT GATCATGGCAACAAGACCCTTTCATCTGATCTCCTAGAGTTCTTGTTGGATCCGTTTGAA CATATCATATCAGTGGAGGGTACTTATGATGATACATCTGGAGGTATAACCATGCTTAGG TTCGAGACCAACTTACAAAAATCTCCATACTTTGGATTTGGTACAACATCAAACTTCTTG CTTCACAAGGATAATCACCAGATCGTTGGATTCCATGGAAAATCCAGTAACATGCTTCAT CAACTTGGGGTCCACGTTATACCCAACGGTTTTAAATTTATTTAA

Peptide Sequence

PEP ID	AT5G38550.1
PEP Infomation	\| Mannose-binding lectin superfamily protein \| Chr5:15432965-15435421 REVERSE LENGTH=594 \| 201606
Sequence	MIQKLGAKGIKSDERNQREWDDGSEHDDVTKIYVRGGREGIRSIYFNYVKNGKPKDGSIH GYFDSGFTQTFEINHLRGEYLESVDAYYDKKSYGMQAIQFKTNFRTSELMGYSYECTMFT LAVQGKKIIGFHGSNYVHILSLGAYFISIAPTRLEVKGSKGSKKWDDGFDHENVSKIEVL GGFEGILYIKVDYIKNGKLETGLVHGHSGGDGFLQKMEINQSKNEYLVYVEGYYDDASET IQGLHFQTNLNNPVMMGYKKGRKFLLASNGNKIIGFHGYADKSLNSLGAYFSTTTPNKLE CQGDRKGLPWDDGCNYDGVKKVYVDSISDIDSVRFEYDNGGKVEKTPYRRDVTNEKEFVL DYPNEFITSVEGTLATPTNFDITWILSLTFKTSKGRTSPTFGSSSPGRKFVLEKNGSALV GFHGYIGPGYNIKALGAYYRPIPPTPDVKRLEAQGGDGGASWDDGGTFNSVRKIYIGLGK NVVGFVKFLYYKNARVVIGDDHGNKTLSSDLLEFLLDPFEHIISVEGTYDDTSGGITMLR FETNLQKSPYFGFGTTSNFLLHKDNHQIVGFHGKSSNMLHQLGVHVIPNGFKFI

Transcript Sequence

Transcript ID	AT5G38550.1
Transcript Infomation	\| Mannose-binding lectin superfamily protein \| Chr5:15432781-15435851 REVERSE LENGTH=2146 \| 201606
Sequence	TAACAATATAAATATACATTTTAGAAAAATGGCCAAAACTTGTATATATGAAAAAAGCCA AGTCCATCGCTAAACTTACTGATCAGCATAGCAGTCTGTTCATCTTCAGAGATTATTGTA CTAGGAAACACAAGAACCACTTCATATCCAGCTGAATATTGATAACATCAGTTCAAGATG ATCCAAAAGTTGGGAGCGAAAGGAATCAAGTCAGATGAACGTAATCAGCGGGAGTGGGAT GATGGATCTGAACATGATGATGTAACAAAGATATACGTACGAGGTGGTCGTGAAGGAATA AGATCCATTTATTTCAACTATGTGAAGAATGGAAAACCCAAAGATGGATCAATCCATGGT TACTTTGACTCTGGTTTCACACAAACGTTTGAGATTAACCATCTACGAGGTGAATATCTT GAATCTGTTGACGCTTACTACGACAAAAAGTCCTACGGTATGCAAGCAATTCAATTCAAA ACTAACTTCAGGACTTCTGAACTGATGGGGTATAGTTATGAGTGTACTATGTTTACGCTA GCCGTCCAAGGAAAGAAGATCATTGGATTTCATGGATCTAATTATGTACATATATTATCT CTTGGAGCTTACTTCATTTCCATTGCTCCTACGAGATTGGAAGTGAAAGGTAGTAAGGGA AGCAAGAAGTGGGACGATGGATTTGACCATGAAAATGTATCAAAGATCGAGGTACTAGGT GGTTTTGAAGGCATACTGTACATCAAAGTTGACTATATCAAGAATGGAAAACTAGAAACT GGATTAGTCCATGGTCACTCTGGTGGTGATGGTTTTTTACAGAAGATGGAGATTAACCAG TCAAAGAACGAATATCTAGTATATGTTGAAGGTTACTACGATGATGCTTCTGAAACCATT CAAGGGCTTCATTTCCAAACTAACCTCAACAATCCTGTTATGATGGGGTATAAAAAGGGC AGGAAGTTTTTACTTGCATCCAATGGAAATAAGATCATTGGGTTTCATGGATATGCCGAC AAAAGCCTAAACTCTCTTGGAGCATATTTCAGTACGACCACTCCTAATAAACTGGAATGC CAAGGTGATCGTAAAGGACTGCCTTGGGATGATGGTTGTAATTATGACGGCGTAAAAAAG GTGTATGTCGATAGTATAAGTGATATAGATAGTGTCAGGTTTGAGTACGATAATGGCGGA AAAGTGGAAAAGACTCCGTACCGGCGTGATGTTACAAATGAGAAGGAGTTTGTGCTTGAC TATCCAAATGAGTTTATCACGTCTGTGGAGGGGACCTTAGCAACTCCGACTAATTTTGAC ATTACGTGGATTCTCTCACTGACATTCAAAACATCAAAAGGGAGAACCTCTCCAACATTT GGATCATCGTCTCCTGGTAGAAAATTTGTGCTGGAGAAGAATGGTAGCGCTCTTGTTGGG TTCCATGGATATATTGGTCCTGGTTATAATATTAAAGCTCTTGGAGCATATTATCGCCCG ATTCCTCCTACTCCTGATGTGAAAAGACTAGAAGCACAAGGTGGTGATGGAGGAGCTTCT TGGGATGATGGTGGTACTTTCAACAGTGTTAGAAAGATCTACATTGGACTAGGCAAAAAC GTTGTAGGCTTTGTCAAGTTTTTGTACTACAAAAACGCTCGTGTTGTCATCGGAGATGAT CATGGCAACAAGACCCTTTCATCTGATCTCCTAGAGTTCTTGTTGGATCCGTTTGAACAT ATCATATCAGTGGAGGGTACTTATGATGATACATCTGGAGGTATAACCATGCTTAGGTTC GAGACCAACTTACAAAAATCTCCATACTTTGGATTTGGTACAACATCAAACTTCTTGCTT CACAAGGATAATCACCAGATCGTTGGATTCCATGGAAAATCCAGTAACATGCTTCATCAA CTTGGGGTCCACGTTATACCCAACGGTTTTAAATTTATTTAATAACGTTCTCTTACTTTT TCTTTTAATAAGTCATGTTTTAATGACATCACATCTTCAACTATCACAATATAATTTTCT TCTCCTAACATTTAAGCTCTGATACTTCTCAGCAAGTGTTGATTTTCTTACCCAAAATGC AAAAACACATTGTCCCAAATTCGTCTTACGGTTTGGTTCCATAATT