Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G38500.1
CDS Infomation

| B3 domain protein (DUF313) | Chr5:15416018-15417253 REVERSE LENGTH=1236 | 201606
Sequence

ATGGATTCAGGGAAGGATATGTGGTCGAGGCTGTGTTTACTGGCGGAAACTGTGGTTATG
GCTGCGGAGGAAGAAGAACAACGTCGTCGTCTACTTGCAGAGAAAAGAGAAGATTCAAAG
AGTCAGAAGAAGACTGTCTCTGAAGAAGACGATAGCGAGAAGAGATTCTTATCTCATGTC
CCGAGGAAAAAAAGGTCGTCTTTGGTAAAGAGACAACAAAAACCTAATGGTGTTTCTACT
TCTTCTTCGTCGCTTCCTGATCTTAACCAAATCCCCATTGATTACGAGACTGAAACCAAA
CAAAACCCTAGTTTTATTGAGCGTTTGGTGTGTGATGAAGAACAACGTGTGAAGAAAGGC
AAATCCAGGATTATATGGGAAGAAGAGGAGGAAGCGGACGAAGACAGCGAGAAGAGACTT
TTCGAGAAGAACCTGATGAAATTTGTAGGACACAGCCAACAACAACAAAAGTTTGAAACT
CTCAATGGGGCTTCATCTTCTTCATCGTTCTTAAACCTTCGTTGTTATGAGGCTTCGTTA
TTCTTGGATTACAACACGGTTGAGTCAGAGAAGACAGAGACGAAAGTTCTACCAAACCCT
AATTACCAATCTTCTTCTCCGTCTTCATGCCTAACGGAGAACGACACAAGTCGCAAGAGG
CGTGCCGTGGAACAGAGGAAGAGTGGTAAAGTCAAGAAAGTAAAGGTTTCTCCTTTGCCA
AGGTTGTCTACAGAGACGCCTGAGTGGGTTTTCCAAGCGATGGGACACATGAACGCTGAT
GCTGAAACCCCGAAGCTGATCTTTGAAAGGACTCTGTTCAAGAGTGATGTCAACTCTAAC
CTCAGCCGTCTCTTAATCCCATTCCAGAAGCTAATCAGAAACGACTTCTTGACGCCAGAG
GAGTGTCGAGCCATGCAGGAAGACAAAGACAAAGACGACGAAGATATTAGTGTGGGAACG
ATTCTTGTGTGTCAAGCCAAGCAGGAAGACGAAGACAAAGACGACGAAGATATTGGTGCG
GGAACGATTCTTGTGAACCAAAGATTTAAAATGTGGGGTTTGCGTTTCAAGATATGGGGG
ATGGAGAAGGACTCTGGACATGGAACCTTGAATTACATTTTGAATTGGGACTGGAATGAT
GTCGTCAAAGGTAACAGCTTAAAAGCCGGCGACAATATCGGTCTTTGGACTTTCAGGTGC
CGTGGAGTCCTCTGCTTTGCTCTTGACACATGGTAG

Peptide Sequence

PEP ID

AT5G38500.1
PEP Infomation

| B3 domain protein (DUF313) | Chr5:15416018-15417253 REVERSE LENGTH=411 | 201606
Sequence

MDSGKDMWSRLCLLAETVVMAAEEEEQRRRLLAEKREDSKSQKKTVSEEDDSEKRFLSHV
PRKKRSSLVKRQQKPNGVSTSSSSLPDLNQIPIDYETETKQNPSFIERLVCDEEQRVKKG
KSRIIWEEEEEADEDSEKRLFEKNLMKFVGHSQQQQKFETLNGASSSSSFLNLRCYEASL
FLDYNTVESEKTETKVLPNPNYQSSSPSSCLTENDTSRKRRAVEQRKSGKVKKVKVSPLP
RLSTETPEWVFQAMGHMNADAETPKLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPE
ECRAMQEDKDKDDEDISVGTILVCQAKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWG
MEKDSGHGTLNYILNWDWNDVVKGNSLKAGDNIGLWTFRCRGVLCFALDTW

Transcript Sequence

Transcript ID

AT5G38500.1
Transcript Infomation

| B3 domain protein (DUF313) | Chr5:15416018-15417253 REVERSE LENGTH=1236 | 201606
Sequence

ATGGATTCAGGGAAGGATATGTGGTCGAGGCTGTGTTTACTGGCGGAAACTGTGGTTATG
GCTGCGGAGGAAGAAGAACAACGTCGTCGTCTACTTGCAGAGAAAAGAGAAGATTCAAAG
AGTCAGAAGAAGACTGTCTCTGAAGAAGACGATAGCGAGAAGAGATTCTTATCTCATGTC
CCGAGGAAAAAAAGGTCGTCTTTGGTAAAGAGACAACAAAAACCTAATGGTGTTTCTACT
TCTTCTTCGTCGCTTCCTGATCTTAACCAAATCCCCATTGATTACGAGACTGAAACCAAA
CAAAACCCTAGTTTTATTGAGCGTTTGGTGTGTGATGAAGAACAACGTGTGAAGAAAGGC
AAATCCAGGATTATATGGGAAGAAGAGGAGGAAGCGGACGAAGACAGCGAGAAGAGACTT
TTCGAGAAGAACCTGATGAAATTTGTAGGACACAGCCAACAACAACAAAAGTTTGAAACT
CTCAATGGGGCTTCATCTTCTTCATCGTTCTTAAACCTTCGTTGTTATGAGGCTTCGTTA
TTCTTGGATTACAACACGGTTGAGTCAGAGAAGACAGAGACGAAAGTTCTACCAAACCCT
AATTACCAATCTTCTTCTCCGTCTTCATGCCTAACGGAGAACGACACAAGTCGCAAGAGG
CGTGCCGTGGAACAGAGGAAGAGTGGTAAAGTCAAGAAAGTAAAGGTTTCTCCTTTGCCA
AGGTTGTCTACAGAGACGCCTGAGTGGGTTTTCCAAGCGATGGGACACATGAACGCTGAT
GCTGAAACCCCGAAGCTGATCTTTGAAAGGACTCTGTTCAAGAGTGATGTCAACTCTAAC
CTCAGCCGTCTCTTAATCCCATTCCAGAAGCTAATCAGAAACGACTTCTTGACGCCAGAG
GAGTGTCGAGCCATGCAGGAAGACAAAGACAAAGACGACGAAGATATTAGTGTGGGAACG
ATTCTTGTGTGTCAAGCCAAGCAGGAAGACGAAGACAAAGACGACGAAGATATTGGTGCG
GGAACGATTCTTGTGAACCAAAGATTTAAAATGTGGGGTTTGCGTTTCAAGATATGGGGG
ATGGAGAAGGACTCTGGACATGGAACCTTGAATTACATTTTGAATTGGGACTGGAATGAT
GTCGTCAAAGGTAACAGCTTAAAAGCCGGCGACAATATCGGTCTTTGGACTTTCAGGTGC
CGTGGAGTCCTCTGCTTTGCTCTTGACACATGGTAG