Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G28740.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:10780774-10783772 FORWARD LENGTH=2754 \| 201606
Sequence	ATGGCGATTTCCAAAGATCTCTATCCTTCTCAAGAGGATCTACTCTATGAGGAAGAGCTT CTTCGAAACCAATTCAGCTTAAAGCTATGGTGGAGATACCTAATCGCAAAAGCTGAATCT CCTTTTAAGAAACGCTTCATCATCTACGAGAGAGCTTTAAAAGCACTTCCTGGAAGCTAT AAACTGTGGTACGCTTATCTTAGAGAACGACTCGATATCGTTAGGAATTTGCCTGTTACT CATCCACAGTACGATTCTCTCAACAATACTTTTGAGAGAGGTCTTGTTACTATGCATAAG ATGCCTAGGATTTGGGTTATGTATCTTCAGACTCTTACGGTTCAGCAATTGATTACTCGG ACTCGGCGAACTTTCGACCGTGCGCTTTGTGCTTTACCTGTTACTCAACATGATAGGATT TGGGAACCGTATCTTGTGTTTGTGAGTCAAAATGGGATTCCTATTGAGACTTCACTTAGG GTTTATAGAAGGTATCTTATGTATGATCCTAGTCATATTGAGGAGTTTATTGAGTTTCTT GTCAAGTCTGAGCGTTGGCAAGAATCTGCAGAGAGATTAGCTTCTGTGTTGAATGATGAT AAGTTTTATTCTATTAAAGGGAAGACTAAGCATAAACTGTGGTTGGAGTTGTGTGAGCTT CTTGTGCATCATGCTAATGTGATTTCGGGTCTTAATGTTGATGCTATTATAAGAGGAGGT ATTAGGAAGTTTACGGATGAAGTTGGAATGCTGTGGACTTCTCTTGCGGATTATTACATT AGGAAGAATTTGTTGGAGAAAGCTAGGGATATTTATGAGGAGGGTATGATGAAGGTAGTA ACTGTAAGGGATTTTAGTGTGATATTTGACGTTTATTCACGGTTCGAGGAGAGTACGGTC GCGAAGAAGATGGAGATGATGAGTTCAAGTGATGAAGAAGATGAGAATGAAGAGAATGGC GTAGAGGATGATGAAGAGGATGTTCGCCTTAATTTTAATCTGTCGGTGAAAGAGTTGCAG AGGAAGATACTGAATGGGTTTTGGTTGAATGATGATAATGATGTTGATCTGAGATTGGCT CGTTTGGAAGAACTGATGAACAGAAGACCTGCACTGGCAAACAGTGTGCTCCTTAGGCAG AATCCTCACAATGTTGAGCAATGGCATCGTAGAGTCAAAATATTTGAGGGAAACGCAGCA AAGCAGATTCTCACATACACAGAAGCAGTGAGGACTGTTGATCCTATGAAAGCAGTTGGG AAGCCTCACACCTTGTGGGTTGCTTTTGCCAAGTTGTATGAAAACCACAAAGACCTGGTC AATACTAGAGTGATTTTTGACAAAGCAGTCCAGGTAAACTACAAAACCGTAGATCATCTC GCCAGTGTGTGGTGTGAGTGGGCTGAGATGGAGCTGAGACACAAGAATTTCAAAGGAGCA TTAGAGCTGATGAGGCGTGCTACAGCTGTACCGACAGTAGAAGTCAGACGGAGAGTTGCT GCTGATGGCAATGAACCAGTCCAGATGAAGCTGCATAGATCCTTGAGGCTTTGGTCCTTT TATGTTGATCTGGAAGAAAGTCTGGGGACGTTAGAATCGACAAGAGCTGTCTATGAGAAA ATATTGGATTTGAGAATAGCTACACCTCAAATTATAATGAATTATGCTTTTCTTCTTGAG GAAAATAAGTACTTTGAAGATGCGTTCAAGGTGTATGAAAGAGGTGTCAAGATATTCAAG TATCCTCATGTGAAAGACATTTGGGTAACCTATCTTACAAAGTTTGTCAAGAGATACGGG AAGACAAAGCTGGAGCGGGCAAGAGAGTTGTTTGAGCATGCTGTTTCAATGGCCCCATCT GATGCTGTCAGGACGTTATACCTTCAGTATGCTAAGCTAGAAGAGGATTATGGTCTGGCT AAACGAGCCATGAAGGTTTATGAGGAAGCCACCAAAAAAGTTCCAGAAGGTCAGAAGCTT GAGATGTACGAGATATACATTTCCCGAGCAGCGGAGATATTTGGTGTTCCCAGAACAAGG GAAATATATGAACAAGCAATTGAATCTGGGCTTCCACATAAGGATGTGAAGATCATGTGC ATAAAATTTGCTGAGCTGGAGAGAAGCTTGGGAGAGATTGATCGTGCTCGTGCACTCTAT AAGTATTCCTCCCAGTTTGCAGATCCAAGGTCCGACCCTGAATTCTGGAACAAATGGCAT GAGTTCGAGGTCCAGCACGGGAACGAAGATACCTACAGAGAAATGCTCCGTATCAAGCGA AGTGTTTCCGCAAGCTATAGTCAGACTCATTTCATTCTACCAGAGAACATGATGCAAAAG GACAAGCTGCTTGATGTGGAAGACGCAAAAGGCGAGCTGAAGAGAGCCGGTTTACCTGAA GACGAAATGGCGGCTCTGGAGAGGCAGCTTTTGTCTACAACTACCCCCACAGAGCCAGCA AAAGATGGCGGGAGAAGAGTTGGGTTTGTAAGCGCAGGAGTCATCTCACAGTCCGGTGAG AATGAGGGGAAACCAGTGACAGGGAATGGAGAAGACATCGAGCTTCCCGATGAAAGTGAT GATGAGTCTGATGGAGATGACCATGTGGAGATCTCTCAGAAAGAAGTCCCTGCCGCTGTT TTTGGAGGACTTGCTAGAAAGAGAGACGAAGACGGCGAAGAAGCTGGAGAAGACGGTGCT GCCCAGAAATTGGGTGCACTTGAGAGGATCAAGAGACAGAAGCTTAATCAGTGA

Peptide Sequence

PEP ID	AT5G28740.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:10780774-10783772 FORWARD LENGTH=917 \| 201606
Sequence	MAISKDLYPSQEDLLYEEELLRNQFSLKLWWRYLIAKAESPFKKRFIIYERALKALPGSY KLWYAYLRERLDIVRNLPVTHPQYDSLNNTFERGLVTMHKMPRIWVMYLQTLTVQQLITR TRRTFDRALCALPVTQHDRIWEPYLVFVSQNGIPIETSLRVYRRYLMYDPSHIEEFIEFL VKSERWQESAERLASVLNDDKFYSIKGKTKHKLWLELCELLVHHANVISGLNVDAIIRGG IRKFTDEVGMLWTSLADYYIRKNLLEKARDIYEEGMMKVVTVRDFSVIFDVYSRFEESTV AKKMEMMSSSDEEDENEENGVEDDEEDVRLNFNLSVKELQRKILNGFWLNDDNDVDLRLA RLEELMNRRPALANSVLLRQNPHNVEQWHRRVKIFEGNAAKQILTYTEAVRTVDPMKAVG KPHTLWVAFAKLYENHKDLVNTRVIFDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKGA LELMRRATAVPTVEVRRRVAADGNEPVQMKLHRSLRLWSFYVDLEESLGTLESTRAVYEK ILDLRIATPQIIMNYAFLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLTKFVKRYG KTKLERARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQKL EMYEIYISRAAEIFGVPRTREIYEQAIESGLPHKDVKIMCIKFAELERSLGEIDRARALY KYSSQFADPRSDPEFWNKWHEFEVQHGNEDTYREMLRIKRSVSASYSQTHFILPENMMQK DKLLDVEDAKGELKRAGLPEDEMAALERQLLSTTTPTEPAKDGGRRVGFVSAGVISQSGE NEGKPVTGNGEDIELPDESDDESDGDDHVEISQKEVPAAVFGGLARKRDEDGEEAGEDGA AQKLGALERIKRQKLNQ

Transcript Sequence

Transcript ID	AT5G28740.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:10780503-10783996 FORWARD LENGTH=3152 \| 201606
Sequence	ATAAATAAACTTATAACAACACTTACCTCAAATCAAATCACTATCGTGTCTTCTCTTTTC CCCAACCCTAAAAAAACGTTCACGCCGGAGAAACAAACCCTTCACCGTCTTCTTCGCCGT TCTTCACCATATCGCCGGCGATTAGTCCCTCACATTCTCACAGATCTAAACTATATGGCG ATTTCCAAAGATCTCTATCCTTCTCAAGAGGATCTACTCTATGAGGAAGAGCTTCTTCGA AACCAATTCAGCTTAAAGCTATGGTGGAGATACCTAATCGCAAAAGCTGAATCTCCTTTT AAGAAACGCTTCATCATCTACGAGAGAGCTTTAAAAGCACTTCCTGGAAGCTATAAACTG TGGTACGCTTATCTTAGAGAACGACTCGATATCGTTAGGAATTTGCCTGTTACTCATCCA CAGTACGATTCTCTCAACAATACTTTTGAGAGAGGTCTTGTTACTATGCATAAGATGCCT AGGATTTGGGTTATGTATCTTCAGACTCTTACGGTTCAGCAATTGATTACTCGGACTCGG CGAACTTTCGACCGTGCGCTTTGTGCTTTACCTGTTACTCAACATGATAGGATTTGGGAA CCGTATCTTGTGTTTGTGAGTCAAAATGGGATTCCTATTGAGACTTCACTTAGGGTTTAT AGAAGGTATCTTATGTATGATCCTAGTCATATTGAGGAGTTTATTGAGTTTCTTGTCAAG TCTGAGCGTTGGCAAGAATCTGCAGAGAGATTAGCTTCTGTGTTGAATGATGATAAGTTT TATTCTATTAAAGGGAAGACTAAGCATAAACTGTGGTTGGAGTTGTGTGAGCTTCTTGTG CATCATGCTAATGTGATTTCGGGTCTTAATGTTGATGCTATTATAAGAGGAGGTATTAGG AAGTTTACGGATGAAGTTGGAATGCTGTGGACTTCTCTTGCGGATTATTACATTAGGAAG AATTTGTTGGAGAAAGCTAGGGATATTTATGAGGAGGGTATGATGAAGGTAGTAACTGTA AGGGATTTTAGTGTGATATTTGACGTTTATTCACGGTTCGAGGAGAGTACGGTCGCGAAG AAGATGGAGATGATGAGTTCAAGTGATGAAGAAGATGAGAATGAAGAGAATGGCGTAGAG GATGATGAAGAGGATGTTCGCCTTAATTTTAATCTGTCGGTGAAAGAGTTGCAGAGGAAG ATACTGAATGGGTTTTGGTTGAATGATGATAATGATGTTGATCTGAGATTGGCTCGTTTG GAAGAACTGATGAACAGAAGACCTGCACTGGCAAACAGTGTGCTCCTTAGGCAGAATCCT CACAATGTTGAGCAATGGCATCGTAGAGTCAAAATATTTGAGGGAAACGCAGCAAAGCAG ATTCTCACATACACAGAAGCAGTGAGGACTGTTGATCCTATGAAAGCAGTTGGGAAGCCT CACACCTTGTGGGTTGCTTTTGCCAAGTTGTATGAAAACCACAAAGACCTGGTCAATACT AGAGTGATTTTTGACAAAGCAGTCCAGGTAAACTACAAAACCGTAGATCATCTCGCCAGT GTGTGGTGTGAGTGGGCTGAGATGGAGCTGAGACACAAGAATTTCAAAGGAGCATTAGAG CTGATGAGGCGTGCTACAGCTGTACCGACAGTAGAAGTCAGACGGAGAGTTGCTGCTGAT GGCAATGAACCAGTCCAGATGAAGCTGCATAGATCCTTGAGGCTTTGGTCCTTTTATGTT GATCTGGAAGAAAGTCTGGGGACGTTAGAATCGACAAGAGCTGTCTATGAGAAAATATTG GATTTGAGAATAGCTACACCTCAAATTATAATGAATTATGCTTTTCTTCTTGAGGAAAAT AAGTACTTTGAAGATGCGTTCAAGGTGTATGAAAGAGGTGTCAAGATATTCAAGTATCCT CATGTGAAAGACATTTGGGTAACCTATCTTACAAAGTTTGTCAAGAGATACGGGAAGACA AAGCTGGAGCGGGCAAGAGAGTTGTTTGAGCATGCTGTTTCAATGGCCCCATCTGATGCT GTCAGGACGTTATACCTTCAGTATGCTAAGCTAGAAGAGGATTATGGTCTGGCTAAACGA GCCATGAAGGTTTATGAGGAAGCCACCAAAAAAGTTCCAGAAGGTCAGAAGCTTGAGATG TACGAGATATACATTTCCCGAGCAGCGGAGATATTTGGTGTTCCCAGAACAAGGGAAATA TATGAACAAGCAATTGAATCTGGGCTTCCACATAAGGATGTGAAGATCATGTGCATAAAA TTTGCTGAGCTGGAGAGAAGCTTGGGAGAGATTGATCGTGCTCGTGCACTCTATAAGTAT TCCTCCCAGTTTGCAGATCCAAGGTCCGACCCTGAATTCTGGAACAAATGGCATGAGTTC GAGGTCCAGCACGGGAACGAAGATACCTACAGAGAAATGCTCCGTATCAAGCGAAGTGTT TCCGCAAGCTATAGTCAGACTCATTTCATTCTACCAGAGAACATGATGCAAAAGGACAAG CTGCTTGATGTGGAAGACGCAAAAGGCGAGCTGAAGAGAGCCGGTTTACCTGAAGACGAA ATGGCGGCTCTGGAGAGGCAGCTTTTGTCTACAACTACCCCCACAGAGCCAGCAAAAGAT GGCGGGAGAAGAGTTGGGTTTGTAAGCGCAGGAGTCATCTCACAGTCCGGTGAGAATGAG GGGAAACCAGTGACAGGGAATGGAGAAGACATCGAGCTTCCCGATGAAAGTGATGATGAG TCTGATGGAGATGACCATGTGGAGATCTCTCAGAAAGAAGTCCCTGCCGCTGTTTTTGGA GGACTTGCTAGAAAGAGAGACGAAGACGGCGAAGAAGCTGGAGAAGACGGTGCTGCCCAG AAATTGGGTGCACTTGAGAGGATCAAGAGACAGAAGCTTAATCAGTGAACAAGCGAGTCG TAGACAATTAGTCTTGTGCTTAGTGATTCTGGAACCAAACTTCATTGTAATACCCAGAAA CGTGAAACTTAGAGAAAAATTTTGTATTCTGTTTTGTTTTATAATTCGACACTTTGTTTA CATAAGAGTTCTCTGTATTTCTTTGGTCTTTGGTCTTAACTAGAGTTAATTTGTTTGTGC AAGTTCTTTGCTTCTTCTACTCGAAAGAGCCT