Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G28460.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:10374927-10377227 FORWARD LENGTH=2301 \| 201606
Sequence	ATGAGTATCATGCTATCAATTTCCCGGCGCCAGAACTCTTATATTCTGCTCAACCATTCT CGATTCCTCCGGCGTTTTTCTTATGATGTTGACCCACGGCCGGAAATCAAATCGGAGAGC CAGGAATTTGTAGTAGTCAAATTTGTGAAAACTCTTCAAAATACCCCGCAACATGATTGG GCGTCGAGCGAGTCGCTAAGTGCGCTTGTCGTATCTTCTTCTTCTGCTTCTCCTTTAGTA TTCTCGCAAATCACGCGGCGGCTAGGATCGTATTCTCTAGCAATCTCGTTCTTCGAGTAC CTGGATGCGAAGTCTCAGTCTCTGAAACGCCGTGAAGAATCTCTCTCCTTGGCGCTTCAG TCGGTCATTGAATTCGCCGGTAGTGAACCGGACCCGCGTGATAAACTTCTCCGTCTCTAC GAGATCGCCAAAGAGAAGAACATTCCTCTTACTATCGTTGCCACTAAGCTTCTGATCCGA TGGTTTGGGCGTATGGGTATGGTGAATCAGTCGGTTCTTGTATACGAAAGACTCGATTCG AATATGAAAAACTCGCAGGTTCGTAATGTTGTGGTAGACGTCTTGCTAAGAAATGGACTT GTGGATGATGCCTTCAAGGTGCTCGACGAAATGCTTCAGAAAGAATCTGTTTTTCCTCCT AATAGAATCACAGCGGATATTGTGTTACACGAGGTTTGGAAGGAAAGGCTTTTGACAGAA GAAAAGATAATTGCTTTGATTTCAAGATTTAGCTCTCATGGTGTCTCCCCAAACTCTGTT TGGTTGACTCGGTTTATATCAAGTCTATGCAAAAATGCTCGCGCCAATACTGCTTGGGAT ATTTTGAGCGACCTGATGAAGAACAAAACCCCACTTGAAGCTCCTCCCTTCAATGCGCTT TTGTCTTGCTTAGGAAGGAATATGGACATTAGTAGAATGAATGATTTAGTCTTGAAGATG GATGAGGTGAAAATCCGGCCTGATGTTGTGACTTTAGGGATTCTTATTAACACTTTATGC AAATCAAGAAGGGTAGATGAAGCTCTCGAAGTTTTTGAACAAATGCGTGGAAAGAGAACT GATGATGGAAATGTGATTAAAGCTGATTCGATTCATTTTAATACTCTCATTGACGGGCTC TGCAAGGTGGGGAGGTTGAAAGAAGCAGAGGAGTTATTGGTAAGGATGAAACTGGAAGAG AGATGTGTGCCCAATGCAGTTACTTACAATTGCTTGATTGATGGGTATTGCAGAGCTGGA AAGCTTGAGACGGCTAAAGAAGTCGTTTCTCGGATGAAAGAGGACGAGATTAAACCTAAT GTGGTAACTGTTAATACAATCGTTGGTGGGATGTGCAGGCACCATGGATTGAACATGGCG GTTGTTTTCTTTATGGATATGGAAAAGGAAGGCGTGAAAGGGAATGTGGTTACTTATATG ACATTGATTCATGCTTGTTGCAGCGTCAGTAATGTAGAGAAGGCTATGTATTGGTATGAA AAAATGTTGGAAGCTGGTTGTTCTCCTGATGCAAAGATCTATTATGCTTTGATCTCTGGA TTGTGCCAAGTTAGACGGGATCATGACGCCATTAGAGTGGTGGAGAAACTGAAAGAAGGA GGGTTTTCTCTTGACTTATTGGCTTACAACATGCTTATTGGGTTGTTTTGTGATAAGAAT AATGCAGAGAAAGTCTATGAGATGCTAACCGATATGGAAAAAGAAGGGAAGAAACCTGAT TCCATCACTTACAACACTCTGATTTCGTTTTTCGGTAAACACAAGGACTTCGAGAGTGTT GAGAGAATGATGGAGCAGATGAGAGAAGACGGGTTAGACCCGACTGTCACGACATATGGA GCGGTGATTGACGCTTATTGCTCAGTCGGCGAATTAGACGAAGCATTGAAGCTCTTTAAG GACATGGGTTTGCACTCAAAGGTCAATCCGAACACTGTAATATACAACATTCTCATAAAC GCATTTTCTAAGCTGGGGAATTTCGGGCAAGCGCTCTCTCTGAAAGAGGAAATGAAGATG AAGATGGTGAGACCTAATGTTGAAACTTACAATGCCTTGTTTAAGTGTCTTAACGAGAAA ACCCAAGGAGAGACATTACTTAAACTGATGGATGAGATGGTCGAACAGTCTTGTGAACCA AATCAGATCACAATGGAGATTCTAATGGAGCGTCTCTCAGGTTCTGATGAGTTAGTTAAG CTGAGGAAGTTTATGCAAGGCTACTCTGTTGCTTCGCCGACCGAGAAAGCTTCACCTTTC GATGTCTTTAGCTTGGGATAA

Peptide Sequence

PEP ID	AT5G28460.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:10374927-10377227 FORWARD LENGTH=766 \| 201606
Sequence	MSIMLSISRRQNSYILLNHSRFLRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDW ASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQ SVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDS NMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTE EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP NQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASPFDVFSLG

Transcript Sequence

Transcript ID	AT5G28460.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:10374713-10377379 FORWARD LENGTH=2667 \| 201606
Sequence	TAAATATAATGTAATCAGCATGATAAAAAGCTCACGTTCAGTTTTATGAGAAAAAATAAA TTTTTGTCCCCATTGTGTAATATTGTAAAGGTTTATTTGGGCTAATGTGTAAGCCCATTA TTTAAAATGGGCCCAACTTCTTGTACGTTGAATTCGCCAACAGAGTTCGTCGTCTCACTT TTCCCGGTGGCCGTCTTTTTCAAAACCTTAGACAATGAGTATCATGCTATCAATTTCCCG GCGCCAGAACTCTTATATTCTGCTCAACCATTCTCGATTCCTCCGGCGTTTTTCTTATGA TGTTGACCCACGGCCGGAAATCAAATCGGAGAGCCAGGAATTTGTAGTAGTCAAATTTGT GAAAACTCTTCAAAATACCCCGCAACATGATTGGGCGTCGAGCGAGTCGCTAAGTGCGCT TGTCGTATCTTCTTCTTCTGCTTCTCCTTTAGTATTCTCGCAAATCACGCGGCGGCTAGG ATCGTATTCTCTAGCAATCTCGTTCTTCGAGTACCTGGATGCGAAGTCTCAGTCTCTGAA ACGCCGTGAAGAATCTCTCTCCTTGGCGCTTCAGTCGGTCATTGAATTCGCCGGTAGTGA ACCGGACCCGCGTGATAAACTTCTCCGTCTCTACGAGATCGCCAAAGAGAAGAACATTCC TCTTACTATCGTTGCCACTAAGCTTCTGATCCGATGGTTTGGGCGTATGGGTATGGTGAA TCAGTCGGTTCTTGTATACGAAAGACTCGATTCGAATATGAAAAACTCGCAGGTTCGTAA TGTTGTGGTAGACGTCTTGCTAAGAAATGGACTTGTGGATGATGCCTTCAAGGTGCTCGA CGAAATGCTTCAGAAAGAATCTGTTTTTCCTCCTAATAGAATCACAGCGGATATTGTGTT ACACGAGGTTTGGAAGGAAAGGCTTTTGACAGAAGAAAAGATAATTGCTTTGATTTCAAG ATTTAGCTCTCATGGTGTCTCCCCAAACTCTGTTTGGTTGACTCGGTTTATATCAAGTCT ATGCAAAAATGCTCGCGCCAATACTGCTTGGGATATTTTGAGCGACCTGATGAAGAACAA AACCCCACTTGAAGCTCCTCCCTTCAATGCGCTTTTGTCTTGCTTAGGAAGGAATATGGA CATTAGTAGAATGAATGATTTAGTCTTGAAGATGGATGAGGTGAAAATCCGGCCTGATGT TGTGACTTTAGGGATTCTTATTAACACTTTATGCAAATCAAGAAGGGTAGATGAAGCTCT CGAAGTTTTTGAACAAATGCGTGGAAAGAGAACTGATGATGGAAATGTGATTAAAGCTGA TTCGATTCATTTTAATACTCTCATTGACGGGCTCTGCAAGGTGGGGAGGTTGAAAGAAGC AGAGGAGTTATTGGTAAGGATGAAACTGGAAGAGAGATGTGTGCCCAATGCAGTTACTTA CAATTGCTTGATTGATGGGTATTGCAGAGCTGGAAAGCTTGAGACGGCTAAAGAAGTCGT TTCTCGGATGAAAGAGGACGAGATTAAACCTAATGTGGTAACTGTTAATACAATCGTTGG TGGGATGTGCAGGCACCATGGATTGAACATGGCGGTTGTTTTCTTTATGGATATGGAAAA GGAAGGCGTGAAAGGGAATGTGGTTACTTATATGACATTGATTCATGCTTGTTGCAGCGT CAGTAATGTAGAGAAGGCTATGTATTGGTATGAAAAAATGTTGGAAGCTGGTTGTTCTCC TGATGCAAAGATCTATTATGCTTTGATCTCTGGATTGTGCCAAGTTAGACGGGATCATGA CGCCATTAGAGTGGTGGAGAAACTGAAAGAAGGAGGGTTTTCTCTTGACTTATTGGCTTA CAACATGCTTATTGGGTTGTTTTGTGATAAGAATAATGCAGAGAAAGTCTATGAGATGCT AACCGATATGGAAAAAGAAGGGAAGAAACCTGATTCCATCACTTACAACACTCTGATTTC GTTTTTCGGTAAACACAAGGACTTCGAGAGTGTTGAGAGAATGATGGAGCAGATGAGAGA AGACGGGTTAGACCCGACTGTCACGACATATGGAGCGGTGATTGACGCTTATTGCTCAGT CGGCGAATTAGACGAAGCATTGAAGCTCTTTAAGGACATGGGTTTGCACTCAAAGGTCAA TCCGAACACTGTAATATACAACATTCTCATAAACGCATTTTCTAAGCTGGGGAATTTCGG GCAAGCGCTCTCTCTGAAAGAGGAAATGAAGATGAAGATGGTGAGACCTAATGTTGAAAC TTACAATGCCTTGTTTAAGTGTCTTAACGAGAAAACCCAAGGAGAGACATTACTTAAACT GATGGATGAGATGGTCGAACAGTCTTGTGAACCAAATCAGATCACAATGGAGATTCTAAT GGAGCGTCTCTCAGGTTCTGATGAGTTAGTTAAGCTGAGGAAGTTTATGCAAGGCTACTC TGTTGCTTCGCCGACCGAGAAAGCTTCACCTTTCGATGTCTTTAGCTTGGGATAATGTTC TTTTAGATACAGTAACCATTACTATAATGTTTTTAATAATTTCTTGATTATGCATTTTAT ATAATTACACAATCGCTATTTATTTATGTATGGTTATTTGCTAAATTTTGTTAAAATAAA AAATCCAGCTTTCTACAATTCTCAATG