Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G28370.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:10332375-10334558 REVERSE LENGTH=2184 \| 201606
Sequence	ATGAGTATCATGCTATCAATTTCCCGGCGCCAGAACTCTTATATTCTGCTCAACCATTCT CGATTCCTCCGGCGTTTTTCTTATGATGTTGACCCACGGCCGGAAATCAAATCGGAGAGC CAGGAATTTGTAGTAGTCAAATTTGTGAAAACTCTTCAAAATACCCCGCAACATGATTGG GCGTCGAGCGAGTCGCTAAGTGCGCTTGTCGTATCTTCTTCTTCTGCTTCTCCTTTAGTA TTCTCGCAAATCACGCGGCGGCTAGGATCGTATTCTCTAGCAATCTCGTTCTTCGAGTAC CTGGATGCGAAGTCTCAGTCTCTGAAACGCCGTGAAGAATCTCTCTCCTTGGCGCTTCAG TCGGTCATTGAATTCGCCGGTAGTGAACCGGACCCGCGTGATAAACTTCTCCGTCTCTAC GAGATCGCCAAAGAGAAGAACATTCCTCTTACTATCGTTGCCACTAAGCTTCTGATCCGA TGGTTTGGGCGTATGGGTATGGTGAATCAGTCGGTTCTTGTATACGAAAGACTCGATTCG AATATGAAAAACTCGCAGGTTCGTAATGTTGTGGTAGACGTCTTGCTAAGAAATGGACTT GTGGATGATGCCTTCAAGGTGCTCGACGAAATGCTTCAGAAAGAATCTGTTTTTCCTCCT AATAGAATCACAGCGGATATTGTGTTACACGAGGTTTGGAAGGAAAGGCTTTTGACAGAA GAAAAGATAATTGCTTTGATTTCAAGATTTAGCTCTCATGGTGTCTCCCCAAACTCTGTT TGGTTGACTCGGTTTATATCAAGTCTATGCAAAAATGCTCGCGCCAATACTGCTTGGGAT ATTTTGAGCGACCTGATGAAGAACAAAACCCCACTTGAAGCTCCTCCCTTCAATGCGCTT TTGTCTTGCTTAGGAAGGAATATGGACATTAGTAGAATGAATGATTTAGTCTTGAAGATG GATGAGGTGAAAATCCGGCCTGATGTTGTGACTTTAGGGATTCTTATTAACACTTTATGC AAATCAAGAAGGGTAGATGAAGCTCTCGAAGTTTTTGAACAAATGCGTGGAAAGAGAACT GATGATGGAAATGTGATTAAAGCTGATTCGATTCATTTTAATACTCTCATTGACGGGCTC TGCAAGGTGGGGAGGTTGAAAGAAGCAGAGGAGTTATTGGTAAGGATGAAACTGGAAGAG AGATGTGTGCCCAATGCAGTTACTTACAATTGCTTGATTGATGGGTATTGCAGAGCTGGA AAGCTTGAGACGGCTAAAGAAGTCGTTTCTCGGATGAAAGAGGACGAGATTAAACCTAAT GTGGTAACTGTTAATACAATCGTTGGTGGGATGTGCAGGCACCATGGATTGAACATGGCG GTTGTTTTCTTTATGGATATGGAAAAGGAAGGCGTGAAAGGGAATGTGGTTACTTATATG ACATTGATTCATGCTTGTTGCAGCGTCAGTAATGTAGAGAAGGCTATGTATTGGTATGAA AAAATGTTGGAAGCTGGTTGTTCTCCTGATGCAAAGATCTATTATGCTTTGATCTCTGGA TTGTGCCAAGTTAGACGGGATCATGACGCCATTAGAGTGGTGGAGAAACTGAAAGAAGGA GGGTTTTCTCTTGACTTATTGGCTTACAACATGCTTATTGGGTTGTTTTGTGATAAGAAT AATGCAGAGAAAGTCTATGAGATGCTAACCGATATGGAAAAAGAAGGGAAGAAACCTGAT TCCATCACTTACAACACTCTGATTTCGTTTTTCGGTAAACACAAGGACTTCGAGAGTGTT GAGAGAATGATGGAGCAGATGAGAGAAGACGGGTTAGACCCGACTGTCACGACATATGGA GCGGTGATTGACGCTTATTGCTCAGTCGGCGAATTAGACGAAGCATTGAAGCTCTTTAAG GACATGGGTTTGCACTCAAAGGTCAATCCGAACACTGTAATATACAACATTCTCATAAAC GCATTTTCTAAGCTGGGGAATTTCGGGCAAGCGCTCTCTCTGAAAGAGGAAATGAAGATG AAGATGGTGAGACCTAATGTTGAAACTTACAATGCCTTGTTTAAGTGTCTTAACGAGAAA ACCCAAGGAGAGACATTACTTAAACTGATGGATGAGATGGTCGAACATCTTGTGAACCAA ATCAGATCACAATGGAGATTCTAA

Peptide Sequence

PEP ID	AT5G28370.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:10332375-10334558 REVERSE LENGTH=727 \| 201606
Sequence	MSIMLSISRRQNSYILLNHSRFLRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDW ASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQ SVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDS NMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTE EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQ IRSQWRF

Transcript Sequence

Transcript ID	AT5G28370.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:10332107-10334784 REVERSE LENGTH=2678 \| 201606
Sequence	CTCATTTTGTTATAAATATAATGTAATCAGCATGATAAAAAGCTCACGTTCAGTTTTATG AGAAAAAATAAATTTTTGTCCCCATTGTGTAATATTGTAAAGGTTTATTTGGGCTAATGT GTAAGCCCATTATTTAAAATGGGCCCAACTTCTTGTACGTTGAATTCGCCAACAGAGTTC GTCGTCTCACTTTTCCCGGTGGCCGTCTTTTTCAAAACCTTAGACAATGAGTATCATGCT ATCAATTTCCCGGCGCCAGAACTCTTATATTCTGCTCAACCATTCTCGATTCCTCCGGCG TTTTTCTTATGATGTTGACCCACGGCCGGAAATCAAATCGGAGAGCCAGGAATTTGTAGT AGTCAAATTTGTGAAAACTCTTCAAAATACCCCGCAACATGATTGGGCGTCGAGCGAGTC GCTAAGTGCGCTTGTCGTATCTTCTTCTTCTGCTTCTCCTTTAGTATTCTCGCAAATCAC GCGGCGGCTAGGATCGTATTCTCTAGCAATCTCGTTCTTCGAGTACCTGGATGCGAAGTC TCAGTCTCTGAAACGCCGTGAAGAATCTCTCTCCTTGGCGCTTCAGTCGGTCATTGAATT CGCCGGTAGTGAACCGGACCCGCGTGATAAACTTCTCCGTCTCTACGAGATCGCCAAAGA GAAGAACATTCCTCTTACTATCGTTGCCACTAAGCTTCTGATCCGATGGTTTGGGCGTAT GGGTATGGTGAATCAGTCGGTTCTTGTATACGAAAGACTCGATTCGAATATGAAAAACTC GCAGGTTCGTAATGTTGTGGTAGACGTCTTGCTAAGAAATGGACTTGTGGATGATGCCTT CAAGGTGCTCGACGAAATGCTTCAGAAAGAATCTGTTTTTCCTCCTAATAGAATCACAGC GGATATTGTGTTACACGAGGTTTGGAAGGAAAGGCTTTTGACAGAAGAAAAGATAATTGC TTTGATTTCAAGATTTAGCTCTCATGGTGTCTCCCCAAACTCTGTTTGGTTGACTCGGTT TATATCAAGTCTATGCAAAAATGCTCGCGCCAATACTGCTTGGGATATTTTGAGCGACCT GATGAAGAACAAAACCCCACTTGAAGCTCCTCCCTTCAATGCGCTTTTGTCTTGCTTAGG AAGGAATATGGACATTAGTAGAATGAATGATTTAGTCTTGAAGATGGATGAGGTGAAAAT CCGGCCTGATGTTGTGACTTTAGGGATTCTTATTAACACTTTATGCAAATCAAGAAGGGT AGATGAAGCTCTCGAAGTTTTTGAACAAATGCGTGGAAAGAGAACTGATGATGGAAATGT GATTAAAGCTGATTCGATTCATTTTAATACTCTCATTGACGGGCTCTGCAAGGTGGGGAG GTTGAAAGAAGCAGAGGAGTTATTGGTAAGGATGAAACTGGAAGAGAGATGTGTGCCCAA TGCAGTTACTTACAATTGCTTGATTGATGGGTATTGCAGAGCTGGAAAGCTTGAGACGGC TAAAGAAGTCGTTTCTCGGATGAAAGAGGACGAGATTAAACCTAATGTGGTAACTGTTAA TACAATCGTTGGTGGGATGTGCAGGCACCATGGATTGAACATGGCGGTTGTTTTCTTTAT GGATATGGAAAAGGAAGGCGTGAAAGGGAATGTGGTTACTTATATGACATTGATTCATGC TTGTTGCAGCGTCAGTAATGTAGAGAAGGCTATGTATTGGTATGAAAAAATGTTGGAAGC TGGTTGTTCTCCTGATGCAAAGATCTATTATGCTTTGATCTCTGGATTGTGCCAAGTTAG ACGGGATCATGACGCCATTAGAGTGGTGGAGAAACTGAAAGAAGGAGGGTTTTCTCTTGA CTTATTGGCTTACAACATGCTTATTGGGTTGTTTTGTGATAAGAATAATGCAGAGAAAGT CTATGAGATGCTAACCGATATGGAAAAAGAAGGGAAGAAACCTGATTCCATCACTTACAA CACTCTGATTTCGTTTTTCGGTAAACACAAGGACTTCGAGAGTGTTGAGAGAATGATGGA GCAGATGAGAGAAGACGGGTTAGACCCGACTGTCACGACATATGGAGCGGTGATTGACGC TTATTGCTCAGTCGGCGAATTAGACGAAGCATTGAAGCTCTTTAAGGACATGGGTTTGCA CTCAAAGGTCAATCCGAACACTGTAATATACAACATTCTCATAAACGCATTTTCTAAGCT GGGGAATTTCGGGCAAGCGCTCTCTCTGAAAGAGGAAATGAAGATGAAGATGGTGAGACC TAATGTTGAAACTTACAATGCCTTGTTTAAGTGTCTTAACGAGAAAACCCAAGGAGAGAC ATTACTTAAACTGATGGATGAGATGGTCGAACATCTTGTGAACCAAATCAGATCACAATG GAGATTCTAATGGAGCGTCTCTCAGGTTCTGATGAGTTAGTTAAGCTGAGGAAGTTTATG CAAGGCTACTCTGTTGCTTCGCCGACCGAGAAAGCTTCACCTTTCGATGTCTTTAGCTTG GGATAATGTTCTTTTAGATACAGTAACCATTACTATAATGTTTTTAATAATTTCTTGATT ATGCATTTTATATAATTACACAATCGCTATTTATTTATGTATGGTTATTTGCTAAATTTT GTTAAAATAAAAAATCCAGCTTTCTACAATTCTCAATG