Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G28300.1
CDS Infomation	\| Duplicated homeodomain-like superfamily protein \| Chr5:10292789-10295101 REVERSE LENGTH=1860 \| 201606
Sequence	ATGTTTGATGGTGGAGTACCTGAGCAGATCCACCGTTTCATAGCTTCTCCACCGCCACCG CCTCCGCTTCCGCCGCATCAACCGGCGGCGGAAAGATCACTACCTTTTCCTGTCTCATTC TCTTCCTTTAACACCAATCATCAACCTCAGCATATGTTGAGCTTGGATAGCCGTAAGATC ATTCACCATCATCATCATCATCATCACCATGACATCAAAGATGGTGGTGCTACTACTGGT GAGTGGATAGGTCAGACGGATCATGATGATAGCGATAATCATCATCAACATCATCATCAT CATCCATGGTGTAGTGATGAAGTTCTTGCTCTTCTTAGGTTCAGATCTACAGTGGAGAAT TGGTTCCCTGAATTCACTTGGGAGCATACTTCAAGAAAGTTGGCAGAAGTTGGTTTTAAG AGGAGTCCACAAGAATGCAAAGAGAAATTTGAAGAAGAAGAGAGAAGATATTTCAATAGC AACAACAACAACAACAACAACACTAATGATCATCAACACATCGGCAATTATAACAACAAG GGAAATAATTATAGGATATTTAGTGAGGTTGAAGAGTTTTATCATCATGGTCATGACAAT GAACATGTTTCATCAGAAGTTGGGGATAACCAAAACAAGAGGACCAATTTAGTAGAAGGA AAAGGAAACGTGGGAGAAACGGTACAAGACTTAATGGCGGAGGACAAATTAAGAGATCAG GATCAGGGTCAAGTAGAAGAAGCATCAATGGAGAATCAAAGAAACTCTATTGAGGTTGGA AAAGTTGGAAACGTAGAAGATGATGCCAAGTCATCATCATCATCAAGCTTGATGATGATC ATGAAGGAGAAGAAGAGGAAGAAGAGGAAGAAAGAGAAAGAGAGGTTTGGTGTGTTAAAA GGGTTTTGTGAGGGTCTAGTGAGGAACATGATAGCTCAACAAGAGGAGATGCATAAGAAA CTCCTGGAAGATATGGTGAAGAAGGAAGAAGAGAAGATAGCGAGAGAGGAAGCTTGGAAG AAGCAAGAGATTGAGAGAGTTAACAAAGAGGTAGAGATTAGAGCACAAGAACAAGCCATG GCTAGTGATAGAAACACCAACATCATCAAGTTCATATCCAAGTTTACAGACCATGATCTT GATGTTGTCCAAAACCCAACAAGCCCTTCTCAAGACTCATCTTCTTTAGCTCTACGAAAA ACCCAAGGCAGAAGAAAGTTTCAAACTTCATCATCACTATTACCTCAAACCCTAACTCCA CATAACCTTTTAACCATTGACAAATCACTTGAACCTTTTTCTACTAAAACCCTAAAACCC AAAAACCAAAACCCAAAACCTCCAAAAAGCGATGATAAAAGTGATCTTGGCAAGAGATGG CCAAAGGATGAAGTGTTGGCTCTGATCAACATTAGAAGAAGTATCAGTAACATGAATGAT GATGATCATAAAGATGAGAACTCATTATCAACATCTTCAAAAGCTGTTCCATTATGGGAA AGAATATCCAAGAAAATGTTGGAGATTGGGTACAAGAGAAGTGCCAAAAGATGCAAAGAG AAATGGGAAAACATCAACAAGTATTTTAGGAAGACAAAAGATGTTAACAAGAAGAGACCA CTTGACTCAAGGACTTGTCCTTATTTTCACCAACTCACAGCTTTATACAGCCAACCACCA ACAGGGACCACCGCCACCACCGCCACCACGGCCACGTCAGCCAGAGATCTAGACACCCGA CCCGAGGAAAACCGGGTTGGATCCCAAGATCCTGATATTTCTGTACCCATGCATGTAGAT GGAGATGGTGCTGGCGATAAAAGCAATGTTCAGTTTTCAGGTTTCGATCTTGAGTTCTAA

Peptide Sequence

PEP ID	AT5G28300.1
PEP Infomation	\| Duplicated homeodomain-like superfamily protein \| Chr5:10292789-10295101 REVERSE LENGTH=619 \| 201606
Sequence	MFDGGVPEQIHRFIASPPPPPPLPPHQPAAERSLPFPVSFSSFNTNHQPQHMLSLDSRKI IHHHHHHHHHDIKDGGATTGEWIGQTDHDDSDNHHQHHHHHPWCSDEVLALLRFRSTVEN WFPEFTWEHTSRKLAEVGFKRSPQECKEKFEEEERRYFNSNNNNNNNTNDHQHIGNYNNK GNNYRIFSEVEEFYHHGHDNEHVSSEVGDNQNKRTNLVEGKGNVGETVQDLMAEDKLRDQ DQGQVEEASMENQRNSIEVGKVGNVEDDAKSSSSSSLMMIMKEKKRKKRKKEKERFGVLK GFCEGLVRNMIAQQEEMHKKLLEDMVKKEEEKIAREEAWKKQEIERVNKEVEIRAQEQAM ASDRNTNIIKFISKFTDHDLDVVQNPTSPSQDSSSLALRKTQGRRKFQTSSSLLPQTLTP HNLLTIDKSLEPFSTKTLKPKNQNPKPPKSDDKSDLGKRWPKDEVLALINIRRSISNMND DDHKDENSLSTSSKAVPLWERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRP LDSRTCPYFHQLTALYSQPPTGTTATTATTATSARDLDTRPEENRVGSQDPDISVPMHVD GDGAGDKSNVQFSGFDLEF

Transcript Sequence

Transcript ID	AT5G28300.1
Transcript Infomation	\| Duplicated homeodomain-like superfamily protein \| Chr5:10292279-10295283 REVERSE LENGTH=2552 \| 201606
Sequence	AATAAACAATAACTATTCATTAATGGTTAAATACCAACCACAGATATTTTATTTTTAAAT AAATATAAGGTCTTGCCCTCAAAATGACAAAAAAAATAGCAATATAAAAAGAGAGACTAA AAAAGAGAGTGAAAAGAGAGATTTCGATGTGAACAAAAAAAGAAGAATAAGAATAAAAGA AAATGTTTGATGGTGGAGTACCTGAGCAGATCCACCGTTTCATAGCTTCTCCACCGCCAC CGCCTCCGCTTCCGCCGCATCAACCGGCGGCGGAAAGATCACTACCTTTTCCTGTCTCAT TCTCTTCCTTTAACACCAATCATCAACCTCAGCATATGTTGAGCTTGGATAGCCGTAAGA TCATTCACCATCATCATCATCATCATCACCATGACATCAAAGATGGTGGTGCTACTACTG GTGAGTGGATAGGTCAGACGGATCATGATGATAGCGATAATCATCATCAACATCATCATC ATCATCCATGGTGTAGTGATGAAGTTCTTGCTCTTCTTAGGTTCAGATCTACAGTGGAGA ATTGGTTCCCTGAATTCACTTGGGAGCATACTTCAAGAAAGTTGGCAGAAGTTGGTTTTA AGAGGAGTCCACAAGAATGCAAAGAGAAATTTGAAGAAGAAGAGAGAAGATATTTCAATA GCAACAACAACAACAACAACAACACTAATGATCATCAACACATCGGCAATTATAACAACA AGGGAAATAATTATAGGATATTTAGTGAGGTTGAAGAGTTTTATCATCATGGTCATGACA ATGAACATGTTTCATCAGAAGTTGGGGATAACCAAAACAAGAGGACCAATTTAGTAGAAG GAAAAGGAAACGTGGGAGAAACGGTACAAGACTTAATGGCGGAGGACAAATTAAGAGATC AGGATCAGGGTCAAGTAGAAGAAGCATCAATGGAGAATCAAAGAAACTCTATTGAGGTTG GAAAAGTTGGAAACGTAGAAGATGATGCCAAGTCATCATCATCATCAAGCTTGATGATGA TCATGAAGGAGAAGAAGAGGAAGAAGAGGAAGAAAGAGAAAGAGAGGTTTGGTGTGTTAA AAGGGTTTTGTGAGGGTCTAGTGAGGAACATGATAGCTCAACAAGAGGAGATGCATAAGA AACTCCTGGAAGATATGGTGAAGAAGGAAGAAGAGAAGATAGCGAGAGAGGAAGCTTGGA AGAAGCAAGAGATTGAGAGAGTTAACAAAGAGGTAGAGATTAGAGCACAAGAACAAGCCA TGGCTAGTGATAGAAACACCAACATCATCAAGTTCATATCCAAGTTTACAGACCATGATC TTGATGTTGTCCAAAACCCAACAAGCCCTTCTCAAGACTCATCTTCTTTAGCTCTACGAA AAACCCAAGGCAGAAGAAAGTTTCAAACTTCATCATCACTATTACCTCAAACCCTAACTC CACATAACCTTTTAACCATTGACAAATCACTTGAACCTTTTTCTACTAAAACCCTAAAAC CCAAAAACCAAAACCCAAAACCTCCAAAAAGCGATGATAAAAGTGATCTTGGCAAGAGAT GGCCAAAGGATGAAGTGTTGGCTCTGATCAACATTAGAAGAAGTATCAGTAACATGAATG ATGATGATCATAAAGATGAGAACTCATTATCAACATCTTCAAAAGCTGTTCCATTATGGG AAAGAATATCCAAGAAAATGTTGGAGATTGGGTACAAGAGAAGTGCCAAAAGATGCAAAG AGAAATGGGAAAACATCAACAAGTATTTTAGGAAGACAAAAGATGTTAACAAGAAGAGAC CACTTGACTCAAGGACTTGTCCTTATTTTCACCAACTCACAGCTTTATACAGCCAACCAC CAACAGGGACCACCGCCACCACCGCCACCACGGCCACGTCAGCCAGAGATCTAGACACCC GACCCGAGGAAAACCGGGTTGGATCCCAAGATCCTGATATTTCTGTACCCATGCATGTAG ATGGAGATGGTGCTGGCGATAAAAGCAATGTTCAGTTTTCAGGTTTCGATCTTGAGTTCT AATAAATCCCTTCTATATATATATTATCAGTTATATTCTCTTTTTCTGCTTTTTGCTAAA ACCTCATTTTTGGTTATTATGATAAAGTTATTATATATGAATAGTGTTACTGTTTTAATG CTATTAGTGGGAAACGTATCTTGACGACTTGGTCGACCGTACACGTGCACCGACAAACAG TGAAATTCAGTTGAACTTGAATAAACTACTGGTTAAATTCCTATTAGTATTCTAGCTTTT ATTCTCCATGAATTTCACGTATACGTGAAGAGATCAGGTCTTTCAACAATAATCAAAATA AATAAATGCAAGGAAAATAAATATTTTTGTGAATTAGTAAATTAGTTACTTATCTGGTTT CTATTTACTATTTAGAGGTGGAAAACGGGATGGGCCAGCAAATTCAGAAAATAAATAAAT CATGTCTTAATTCAATTTGAAGTGCAGAACCAGACCGCAAAAAAAAAAAAATAATAATAA TACAAGTCGTTTCATTCTTTACAATCTTAGGC