Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G27610.1
CDS Infomation	\| protein ALWAYS EARLY 1 \| Chr5:9764852-9769706 FORWARD LENGTH=2916 \| 201606
Sequence	ATGGCGCCTACTAGGAAGTCGAAGAGTGTGAACAAGCGTTTCACCAATGAAGCGTCTCCA GATATCAATTTTGGGAGCGCAAGCAAAACCAAGCAAAGAAAGAAGAAATTGGCTGATAAG CTGGGACCTCAGTGGACCAAAAGGGAGCTTGTGCGTTTCTATGATGCTTATAGGAAGTAT GTGGGAGACTGGAAAAAGGTAGCTGCTGCAGTACGGAATAACCGGTCTGTTGAGATGGTC GAAACACTCTTTTGTATGAATCGGGCATACTTATCCTTGCCCGAGGGAACTGCTTCTGTA GCTGGCCTTATTGCAATGATGACTGATCACTACAGCGTCATGGAGGGGAGCGAAAGTGAA GGAGAAGACCATGATGCTTCTGAGGTAACGAGGAAACATCTGAAGCGCAAACGTCCTCAA GTTCTGCCTAGTGATTTTCGAGAAGAAGTTGTTCCACCACATTCAGTTGCATCAGTAGAA GGATGTCTCTCATTCTTGAAGCAGACACAAGCTTATGAAAAAAGGCAACGGGCCACTGGA AAACGTACACCTCGGTTTCTTGTCGCAATTACACATGAGAGGGATGATATAGAAGATTTT AGTCCACCAAATAAAAGAGCCAAGAAACAACTTGATGCCGATGATGATGCATCAAGAAGG GGAGGAGGGTCTCCATACAGAAGAAAAGAACTCAGTGAAATCACACCAACTAGGCTTAGG AAAACGTCACAAGCACAGGAAGCACAATTCAAGCACCCTGATAGTTCCATGTTTGAGAAT GGGGTGAGAGATAGATGGCATAAAAAGGGAGCTGCTGATAGAGATGGTGCCTTGTTGATG GATATGGAAGGACTTGTTACCCAAAAGGAAAAAATTGTGAGAGTTGAAGAAGCAGAAGGA AATTATTCTGATGATGATGATGGATTAGGAGCTCTGAAGACATTGGCTGAAATGTCAGCT TCACTGGCTCCGGCTGGTTTGTTGGAATCAGAATCATCTCCACACTGGGAAGAAGAAAGA AAAACTAACAACGTGGATAAGAAATCTAACACTCTGGAAACCGTGTCAACAAGCCATCAC AGAGAAAAAGCAAAACAAGCAGGACTAGAAGATAATCTCCTGCATGCAATTTCAGCCCCT GATAAAAGAAAACCGAAGTCTGTGCCGGAATCCGTTGATGGTAATGTTGTTTCCATCGAG GAGCTTCGCACTTCAAGCAGAAAACGTAAACCAAAGTTTCAGGTGCTAGATGTTGTAGCT CCAAAAGAGTCTACACAGGACAAATCTCTATATACTAAGGAATCGGCTGAAGTTGATAGT TTGAAGACTCCCGTCAAAGCAAGACGTTCTAGTCAAGGTCCAGCAAAACAGCTGAAAACT GCAAAGACCACGGTAGAATCTTCTTCAGCTAGTGATAAGAAAATAACTGGACCGGATGCA GTAGTGCCAGCTACACAAGTTTCAGCTTCGGGTCCAGAGACTTTGCCACAGAAACCACCA AACAGGCGTAAGATAAGTTTGAAGAAAAGTTTACAAGAAAGAGCTAAATCTTTAGAAACC ACTCATGACAAACCACGTAGTTTCAAAAAACTTTCAGAACATGAATTACTACAGGAGAAG TTGTCAAATTGTCTGTCATATCCATTGGTACGTCGATGGTGCATATATGAATGGTTCTAC AGTGCTATTGACTATCCCTGGTTTGCAAAGATGGAGTTCACTGATTATCTAAATCATGTG GGGCTTGGTCACGCTCCAAGACTTACTCGTGTTGAATGGAGTGTCATTAAAAGTTCTCTC GGTAGACCTCGGAGATTGTCTCAGAGATTCCTACAGGATGAGCGGGATAAACTCCAAGAA TATCGTGAGTCTGTGAGAAAGCATTATACAGAGCTGCGTGGATGTGCTACGGGAGTGCTT CATACAGATTTGGCCCGTCCTTTATCAGTCGGGAATAGAGTGATTGCCATCCATCCTAAA ACACGGGAGATTCGTGATGGCAAGATTCTTACTGTGGATCATAACAAGTGCAACGTTCTC TTTGATGAATTGGGTGTCGAGTTAGTTATGGACATTGACTGCATGCCTTTAAATCCATTG GAATACATGCCAGAGGGTCTAAGGAGGCAAATTGATAAGTGCTTGGCTATATGCAAAGAA GCAAGGCTTAACAGACACCCAAGCTCTGATGCATCTGTTCTGTTCTCTCCTTCTGTGCTT GAAAATGTCAACTTTTCCATGAATCCTCCTCCTGCGAAACAGGATGATATCAGAGAGCCA GTTTTGTATGGTAAAGTAATAGCAACCAACACTACTGATCAATCTATCGTAATCAATAGC AAAGTAACAGGAACAGAAATTCAACGGACTCTGGCACTGCAGCATACTTCCGATGCGCAG GAAATGGAGCCAGAAATGATTGAAATTGTCATTGAATCAAAGTCAATAGCGCAAGCAATG GTGGATGCAGCTATAAAGGCTGCATCGTCGGGGAAGAACAATGAAGACTCAGAGAATATG GTTCACCAAGCTTTAAGCTCCATTGGCGAACATCAGCCATTAGACAACTCTATAGTGCCT GGTATCAAGCATCAAGAGTATACCAATGGCAGCTTGGATCATCATTCCTTAAACACAGCA GAGCCGATGAGTAACGGTTTCATCTCACAGGAAGGATCAGGAAAAAACAAAACACCAATG CCTTCAGAGCTTATCACCTCTTGTGTTGCATCTTGGCTCATGATGCAGATGATCTCAAAG AAGCAGTACCCACCAGCAGATGTGGCTCAGCTAATGGATACAGTAGTGAATGACTTGCAG CCACGGTGTCCACAGAATATGCCGATATACAGAGAAATTCAAACTTGTATGGGATTGATC AAGACTCAAATAATGGCTCTTGTAAGAACGTCATGA

Peptide Sequence

PEP ID	AT5G27610.1
PEP Infomation	\| protein ALWAYS EARLY 1 \| Chr5:9764852-9769706 FORWARD LENGTH=971 \| 201606
Sequence	MAPTRKSKSVNKRFTNEASPDINFGSASKTKQRKKKLADKLGPQWTKRELVRFYDAYRKY VGDWKKVAAAVRNNRSVEMVETLFCMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSESE GEDHDASEVTRKHLKRKRPQVLPSDFREEVVPPHSVASVEGCLSFLKQTQAYEKRQRATG KRTPRFLVAITHERDDIEDFSPPNKRAKKQLDADDDASRRGGGSPYRRKELSEITPTRLR KTSQAQEAQFKHPDSSMFENGVRDRWHKKGAADRDGALLMDMEGLVTQKEKIVRVEEAEG NYSDDDDGLGALKTLAEMSASLAPAGLLESESSPHWEEERKTNNVDKKSNTLETVSTSHH REKAKQAGLEDNLLHAISAPDKRKPKSVPESVDGNVVSIEELRTSSRKRKPKFQVLDVVA PKESTQDKSLYTKESAEVDSLKTPVKARRSSQGPAKQLKTAKTTVESSSASDKKITGPDA VVPATQVSASGPETLPQKPPNRRKISLKKSLQERAKSLETTHDKPRSFKKLSEHELLQEK LSNCLSYPLVRRWCIYEWFYSAIDYPWFAKMEFTDYLNHVGLGHAPRLTRVEWSVIKSSL GRPRRLSQRFLQDERDKLQEYRESVRKHYTELRGCATGVLHTDLARPLSVGNRVIAIHPK TREIRDGKILTVDHNKCNVLFDELGVELVMDIDCMPLNPLEYMPEGLRRQIDKCLAICKE ARLNRHPSSDASVLFSPSVLENVNFSMNPPPAKQDDIREPVLYGKVIATNTTDQSIVINS KVTGTEIQRTLALQHTSDAQEMEPEMIEIVIESKSIAQAMVDAAIKAASSGKNNEDSENM VHQALSSIGEHQPLDNSIVPGIKHQEYTNGSLDHHSLNTAEPMSNGFISQEGSGKNKTPM PSELITSCVASWLMMQMISKKQYPPADVAQLMDTVVNDLQPRCPQNMPIYREIQTCMGLI KTQIMALVRTS

Transcript Sequence

Transcript ID	AT5G27610.1
Transcript Infomation	\| protein ALWAYS EARLY 1 \| Chr5:9764135-9769992 FORWARD LENGTH=3433 \| 201606
Sequence	AAGTTTCGCGGCAACGCCTCTCTTCTCTTCTCTCTCTCTCTCTTCTCTCTAATTCAATCC AAAATCCTCTTTTATCTCTCTCTCGCTCTCGCTCTCTCTTTAAACCTCTCTTCGAATATT TGTCACCGATCTCGAACAAGGTTTTTGAGCTTTCTCTTCTCCGAGTCGGTTTCTGTGTTG TTTCTTCGTCGATTCTTATTGAGCTCCGTGATTGGCAGAGAAAACAGTTATATGGCGCCT ACTAGGAAGTCGAAGAGTGTGAACAAGCGTTTCACCAATGAAGCGTCTCCAGATATCAAT TTTGGGAGCGCAAGCAAAACCAAGCAAAGAAAGAAGAAATTGGCTGATAAGCTGGGACCT CAGTGGACCAAAAGGGAGCTTGTGCGTTTCTATGATGCTTATAGGAAGTATGTGGGAGAC TGGAAAAAGGTAGCTGCTGCAGTACGGAATAACCGGTCTGTTGAGATGGTCGAAACACTC TTTTGTATGAATCGGGCATACTTATCCTTGCCCGAGGGAACTGCTTCTGTAGCTGGCCTT ATTGCAATGATGACTGATCACTACAGCGTCATGGAGGGGAGCGAAAGTGAAGGAGAAGAC CATGATGCTTCTGAGGTAACGAGGAAACATCTGAAGCGCAAACGTCCTCAAGTTCTGCCT AGTGATTTTCGAGAAGAAGTTGTTCCACCACATTCAGTTGCATCAGTAGAAGGATGTCTC TCATTCTTGAAGCAGACACAAGCTTATGAAAAAAGGCAACGGGCCACTGGAAAACGTACA CCTCGGTTTCTTGTCGCAATTACACATGAGAGGGATGATATAGAAGATTTTAGTCCACCA AATAAAAGAGCCAAGAAACAACTTGATGCCGATGATGATGCATCAAGAAGGGGAGGAGGG TCTCCATACAGAAGAAAAGAACTCAGTGAAATCACACCAACTAGGCTTAGGAAAACGTCA CAAGCACAGGAAGCACAATTCAAGCACCCTGATAGTTCCATGTTTGAGAATGGGGTGAGA GATAGATGGCATAAAAAGGGAGCTGCTGATAGAGATGGTGCCTTGTTGATGGATATGGAA GGACTTGTTACCCAAAAGGAAAAAATTGTGAGAGTTGAAGAAGCAGAAGGAAATTATTCT GATGATGATGATGGATTAGGAGCTCTGAAGACATTGGCTGAAATGTCAGCTTCACTGGCT CCGGCTGGTTTGTTGGAATCAGAATCATCTCCACACTGGGAAGAAGAAAGAAAAACTAAC AACGTGGATAAGAAATCTAACACTCTGGAAACCGTGTCAACAAGCCATCACAGAGAAAAA GCAAAACAAGCAGGACTAGAAGATAATCTCCTGCATGCAATTTCAGCCCCTGATAAAAGA AAACCGAAGTCTGTGCCGGAATCCGTTGATGGTAATGTTGTTTCCATCGAGGAGCTTCGC ACTTCAAGCAGAAAACGTAAACCAAAGTTTCAGGTGCTAGATGTTGTAGCTCCAAAAGAG TCTACACAGGACAAATCTCTATATACTAAGGAATCGGCTGAAGTTGATAGTTTGAAGACT CCCGTCAAAGCAAGACGTTCTAGTCAAGGTCCAGCAAAACAGCTGAAAACTGCAAAGACC ACGGTAGAATCTTCTTCAGCTAGTGATAAGAAAATAACTGGACCGGATGCAGTAGTGCCA GCTACACAAGTTTCAGCTTCGGGTCCAGAGACTTTGCCACAGAAACCACCAAACAGGCGT AAGATAAGTTTGAAGAAAAGTTTACAAGAAAGAGCTAAATCTTTAGAAACCACTCATGAC AAACCACGTAGTTTCAAAAAACTTTCAGAACATGAATTACTACAGGAGAAGTTGTCAAAT TGTCTGTCATATCCATTGGTACGTCGATGGTGCATATATGAATGGTTCTACAGTGCTATT GACTATCCCTGGTTTGCAAAGATGGAGTTCACTGATTATCTAAATCATGTGGGGCTTGGT CACGCTCCAAGACTTACTCGTGTTGAATGGAGTGTCATTAAAAGTTCTCTCGGTAGACCT CGGAGATTGTCTCAGAGATTCCTACAGGATGAGCGGGATAAACTCCAAGAATATCGTGAG TCTGTGAGAAAGCATTATACAGAGCTGCGTGGATGTGCTACGGGAGTGCTTCATACAGAT TTGGCCCGTCCTTTATCAGTCGGGAATAGAGTGATTGCCATCCATCCTAAAACACGGGAG ATTCGTGATGGCAAGATTCTTACTGTGGATCATAACAAGTGCAACGTTCTCTTTGATGAA TTGGGTGTCGAGTTAGTTATGGACATTGACTGCATGCCTTTAAATCCATTGGAATACATG CCAGAGGGTCTAAGGAGGCAAATTGATAAGTGCTTGGCTATATGCAAAGAAGCAAGGCTT AACAGACACCCAAGCTCTGATGCATCTGTTCTGTTCTCTCCTTCTGTGCTTGAAAATGTC AACTTTTCCATGAATCCTCCTCCTGCGAAACAGGATGATATCAGAGAGCCAGTTTTGTAT GGTAAAGTAATAGCAACCAACACTACTGATCAATCTATCGTAATCAATAGCAAAGTAACA GGAACAGAAATTCAACGGACTCTGGCACTGCAGCATACTTCCGATGCGCAGGAAATGGAG CCAGAAATGATTGAAATTGTCATTGAATCAAAGTCAATAGCGCAAGCAATGGTGGATGCA GCTATAAAGGCTGCATCGTCGGGGAAGAACAATGAAGACTCAGAGAATATGGTTCACCAA GCTTTAAGCTCCATTGGCGAACATCAGCCATTAGACAACTCTATAGTGCCTGGTATCAAG CATCAAGAGTATACCAATGGCAGCTTGGATCATCATTCCTTAAACACAGCAGAGCCGATG AGTAACGGTTTCATCTCACAGGAAGGATCAGGAAAAAACAAAACACCAATGCCTTCAGAG CTTATCACCTCTTGTGTTGCATCTTGGCTCATGATGCAGATGATCTCAAAGAAGCAGTAC CCACCAGCAGATGTGGCTCAGCTAATGGATACAGTAGTGAATGACTTGCAGCCACGGTGT CCACAGAATATGCCGATATACAGAGAAATTCAAACTTGTATGGGATTGATCAAGACTCAA ATAATGGCTCTTGTAAGAACGTCATGAAACATTTGTGTCCTTTGTAATTAACCTGACATC GAAGATAACACTTGGAGATCAGATTTAATTGTTTGGATTGTAGAGGTTAGTTTAGTTTAT AGTTAGTTAATAATTTGAACAGCTCCAAAGGCTGTTGATAATTAGTTACCATTGATTCTG TAACTTTTTTTTGTCATCATTCATTGTAACTTTGGTTACCTTTTACTTTGGAGCTGTTTT TTTTTTCTTTCTTTCTCAGTGATTATTTTCTTGGGTCATTTTGGATCCTAATGGCTGAAA TAATTTATTCCCA