Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G27230.1
CDS Infomation	\| Frigida-like protein \| Chr5:9584255-9587838 FORWARD LENGTH=2847 \| 201606
Sequence	ATGGAGAAGGTAACGAGTGGCTTAGAGCTTGTTGATATAAGCAAGCGTAACTTCCGCAAA ACCCTAGAATCTCTCCAAGAAGGTGCTCATTCGCTTCTTCTACTTACAATTCAATGGAAA GAGATCGAATCGTATTTCGATTCCACGAGAAGCGTCCTCGAGGAACGAGCCAAGGAGCTA GAAGCGTTGGAGGAATCGATAAAGGTTAAAGCTTTGGAATTGGAGAAGAAAGAGAAGGAG CTTTGTTTGATTGATGAGTCGATGAAAGCGAAACAGAGCGAGTTTGAGAAGAAGGAGAAG GATTTTGATTTGGAACAGAAGGCAGAGGTTGAGAAGAGGAAAAGAGAAGTTGAACAGTTG GAGAAGTTTACGACGAGGATGGAATCGGTGGAGAGGGTTTCTGATGAGAAGTTGATGGAA CTTGGTTTGAGAGCAACAGAGCTTGAATTGAAGATGGAAGAAGTAGAGAAGCATAGAGAA CGGATTGTCGCTGGAGATAAGTTGAGAGGTGAGTTTGAGCCATTGGTTTCGTTGTTGGCT AAGAACATGGGCTTAAGTGTGACAATGCCTGTAAAGTGTTCGACTTTATACCTGAACGAG AATGCAGATGAGATGGTTAAGAAAAACACAGCCTTGGCGAGAATGGTTCCGTATTTGGAT CCTGCAAAGGTGGTTTTGGATGCTATAGAAGGGTCTTTTAAGGAATACTGGAAGAAAGAT TTAGGAGAAGCTGATGATAGAGTAGTTAATAGTTGGATTGTTCTGTTAGAGAATCTGATA AAGATGAATCTGAAAATCACACCGCAGGTGAAACAGGAAGCGACTCCACTTGGGATTGCT TGGTTAGGCAAGGCTAAAGCCAATATGAAGAATGACCCCCCGCAGGTTTTTGGTTGTGCG TTGTTTCTGGCTGCTTACGGTTTGGGCTCTCTGACTACTCATGGGGTGCTCTTAACCCTT GTAGAGCGGTTCCTTTTGTATGATCATGCCCCAAAACTGTTTCGGCTTCTGGGGTTAGAA GAGAAGGTTTCTGGTGCGGTTGAAACGCTAAAGAAAAAGGAAGAGTATCTTGCAACACTG AAATTTATCTGTGAATTCCGGTTATACAAGCTTTGTCCAGGAGGAAGACCAGGAGAACTT TTGATTGAATTCTTTGATTCCTCAGATAAAGCTGCCCGAGTGATTGCTGGGACTGGAACT TCAATGGAGGCGCAGAAAGCAAGGAGGGAGAAGAAAAAAGCTGATGCAGCCATGGCCATT AAGTACATCAAAGAGGCCAAAGCCGAGACTATGTTTCCTGCTAAAATTCTTAAAAGGTTG GCTGTAGTGAAGAACGATGAATCAGCTCAGAGAGCAATGGAACCAGTTCAAAAAAGTTAT GAAAAAAGACAGAGTACGACCAAAGGGGTAGAGAAATCTGAAGCTAAATCTAGTATTCCA TATGAACAGAAGCATGTAATCAAACGTCCAAGATTAACTGAACCAACAGCTCCTTCTCAG AATTTAACAGTGAAGCAGCCCGAGGTTGTGTGCGTTCCTACTGGGAAGCAAGTTAAAGAA TCCGGCGCAGATCATCAGCCAGACACCATAGCAACTCATCCATCAGGTACCGAAACCAAG CTTAACATTCTCTCTGGTTCCATTAAGGCGGACATGTTAAGGGAGCTAGTAGAAAAGCAA CCTCTGAAGGAGAGTGAGGATCTCTCAAATGCTCTCAAATGCACACCAGATCCAGCAAAG CTTTTTCTAGACACATCCATGGCTTTGTGTCCTACAAACACCGAAGGAGGATACGAGTTC AAGATGCTGATTACTTCAGCTAGCTGCTCCTTATTGTTGAATCAGCTGAAGAAGCTCCTG CCTAAAATTGGACATCCTGTGAAAGGCGATGCGAAGAAACTTGCCGTTTACTGGAAAGAT AAAATTGCAAAGAGCAAAAGAGATCAATTAGAAGTCATCTGCTTCCTACAGTTTCTTGGT ATCTTTGGAATTGTGTCAGAGTTCAAGGCTGATGACCTTCTTGGTCTACTGGATAATTCT TATTGGCAAACTGTGTCTCCTGATCTTTGCCAGTTTCTCGGGTTGGACGACGCCATTCCA GGTTTCATTCAAAATCTCATAAAAACTGGACATCGTATCAAGGCAATAGACTACATATAC TCATTTGGTATGGTCCATAGATTCCAACCTGTATCCGCTATCATAAACGATTCCTTGAGG ATTACAAAGGAATCTGCAGAGAAGTCGTATAGAGAAGCCAAGAACGAATCTACAACGCAG GTTGCAGCCATAGACAGACAGGTTAGAGCACTAAGAGCCGCCATTAAATGCATATCGTGT CATAAACTCGAATCAGAGTTCCAACTCGGAGACCTTGAAGAACAAATCAAGTCGCTTTTG AAGCTCAGAAGAAACACTTCTAATGGATCTGGATCCGGATCCGCATCGTCCAAACCCGAT TCGACAATCAAACAATCTCAGACGGCAAAACCACCAACTGTAGCAGAGGTTGCTCCTGTT ACTAGCAACATACCTTTGGAACCTTCAACAGAAGCTGCATCCTCCTCTGCGAGCAAACCG TTTTCAAAGAAGAATAAGAGAGGGAAAAAACGCAGCATGTCAGGAAACAATCAGAGCTCA GGACACATTGCTTCGCACACAAGCAATCACTATCCCAGCCATGACTATTCCCTGAATCAA AGACTAACGTGGCCGGTCGACAACTACGACAGAGGTTTCACCGGATTTCCTAACCCCGAC TACAATAATAACCAATGGGGACAACCAGAGGGACCTCAATTTTACCATCTTTATCAACCG CTAGATCCTCGCTACAGGAACTACTAG

Peptide Sequence

PEP ID	AT5G27230.1
PEP Infomation	\| Frigida-like protein \| Chr5:9584255-9587838 FORWARD LENGTH=948 \| 201606
Sequence	MEKVTSGLELVDISKRNFRKTLESLQEGAHSLLLLTIQWKEIESYFDSTRSVLEERAKEL EALEESIKVKALELEKKEKELCLIDESMKAKQSEFEKKEKDFDLEQKAEVEKRKREVEQL EKFTTRMESVERVSDEKLMELGLRATELELKMEEVEKHRERIVAGDKLRGEFEPLVSLLA KNMGLSVTMPVKCSTLYLNENADEMVKKNTALARMVPYLDPAKVVLDAIEGSFKEYWKKD LGEADDRVVNSWIVLLENLIKMNLKITPQVKQEATPLGIAWLGKAKANMKNDPPQVFGCA LFLAAYGLGSLTTHGVLLTLVERFLLYDHAPKLFRLLGLEEKVSGAVETLKKKEEYLATL KFICEFRLYKLCPGGRPGELLIEFFDSSDKAARVIAGTGTSMEAQKARREKKKADAAMAI KYIKEAKAETMFPAKILKRLAVVKNDESAQRAMEPVQKSYEKRQSTTKGVEKSEAKSSIP YEQKHVIKRPRLTEPTAPSQNLTVKQPEVVCVPTGKQVKESGADHQPDTIATHPSGTETK LNILSGSIKADMLRELVEKQPLKESEDLSNALKCTPDPAKLFLDTSMALCPTNTEGGYEF KMLITSASCSLLLNQLKKLLPKIGHPVKGDAKKLAVYWKDKIAKSKRDQLEVICFLQFLG IFGIVSEFKADDLLGLLDNSYWQTVSPDLCQFLGLDDAIPGFIQNLIKTGHRIKAIDYIY SFGMVHRFQPVSAIINDSLRITKESAEKSYREAKNESTTQVAAIDRQVRALRAAIKCISC HKLESEFQLGDLEEQIKSLLKLRRNTSNGSGSGSASSKPDSTIKQSQTAKPPTVAEVAPV TSNIPLEPSTEAASSSASKPFSKKNKRGKKRSMSGNNQSSGHIASHTSNHYPSHDYSLNQ RLTWPVDNYDRGFTGFPNPDYNNNQWGQPEGPQFYHLYQPLDPRYRNY

Transcript Sequence

Transcript ID	AT5G27230.1
Transcript Infomation	\| Frigida-like protein \| Chr5:9584092-9588049 FORWARD LENGTH=3221 \| 201606
Sequence	ACCCTAATTCTCTAAATATTATCAACATTCAGGCGCCGAGAGAGAACAGTGAACGCAGAA AGTGAAGAATTCAAAGTTCGCTGCTTCTGTTTAAGAGAATTTTGATTTTGATTTTTGTTT TTGTGGTGAATTTATTAGGGTTTTATTGTTAACGAGTAGCTTGATGGAGAAGGTAACGAG TGGCTTAGAGCTTGTTGATATAAGCAAGCGTAACTTCCGCAAAACCCTAGAATCTCTCCA AGAAGGTGCTCATTCGCTTCTTCTACTTACAATTCAATGGAAAGAGATCGAATCGTATTT CGATTCCACGAGAAGCGTCCTCGAGGAACGAGCCAAGGAGCTAGAAGCGTTGGAGGAATC GATAAAGGTTAAAGCTTTGGAATTGGAGAAGAAAGAGAAGGAGCTTTGTTTGATTGATGA GTCGATGAAAGCGAAACAGAGCGAGTTTGAGAAGAAGGAGAAGGATTTTGATTTGGAACA GAAGGCAGAGGTTGAGAAGAGGAAAAGAGAAGTTGAACAGTTGGAGAAGTTTACGACGAG GATGGAATCGGTGGAGAGGGTTTCTGATGAGAAGTTGATGGAACTTGGTTTGAGAGCAAC AGAGCTTGAATTGAAGATGGAAGAAGTAGAGAAGCATAGAGAACGGATTGTCGCTGGAGA TAAGTTGAGAGGTGAGTTTGAGCCATTGGTTTCGTTGTTGGCTAAGAACATGGGCTTAAG TGTGACAATGCCTGTAAAGTGTTCGACTTTATACCTGAACGAGAATGCAGATGAGATGGT TAAGAAAAACACAGCCTTGGCGAGAATGGTTCCGTATTTGGATCCTGCAAAGGTGGTTTT GGATGCTATAGAAGGGTCTTTTAAGGAATACTGGAAGAAAGATTTAGGAGAAGCTGATGA TAGAGTAGTTAATAGTTGGATTGTTCTGTTAGAGAATCTGATAAAGATGAATCTGAAAAT CACACCGCAGGTGAAACAGGAAGCGACTCCACTTGGGATTGCTTGGTTAGGCAAGGCTAA AGCCAATATGAAGAATGACCCCCCGCAGGTTTTTGGTTGTGCGTTGTTTCTGGCTGCTTA CGGTTTGGGCTCTCTGACTACTCATGGGGTGCTCTTAACCCTTGTAGAGCGGTTCCTTTT GTATGATCATGCCCCAAAACTGTTTCGGCTTCTGGGGTTAGAAGAGAAGGTTTCTGGTGC GGTTGAAACGCTAAAGAAAAAGGAAGAGTATCTTGCAACACTGAAATTTATCTGTGAATT CCGGTTATACAAGCTTTGTCCAGGAGGAAGACCAGGAGAACTTTTGATTGAATTCTTTGA TTCCTCAGATAAAGCTGCCCGAGTGATTGCTGGGACTGGAACTTCAATGGAGGCGCAGAA AGCAAGGAGGGAGAAGAAAAAAGCTGATGCAGCCATGGCCATTAAGTACATCAAAGAGGC CAAAGCCGAGACTATGTTTCCTGCTAAAATTCTTAAAAGGTTGGCTGTAGTGAAGAACGA TGAATCAGCTCAGAGAGCAATGGAACCAGTTCAAAAAAGTTATGAAAAAAGACAGAGTAC GACCAAAGGGGTAGAGAAATCTGAAGCTAAATCTAGTATTCCATATGAACAGAAGCATGT AATCAAACGTCCAAGATTAACTGAACCAACAGCTCCTTCTCAGAATTTAACAGTGAAGCA GCCCGAGGTTGTGTGCGTTCCTACTGGGAAGCAAGTTAAAGAATCCGGCGCAGATCATCA GCCAGACACCATAGCAACTCATCCATCAGGTACCGAAACCAAGCTTAACATTCTCTCTGG TTCCATTAAGGCGGACATGTTAAGGGAGCTAGTAGAAAAGCAACCTCTGAAGGAGAGTGA GGATCTCTCAAATGCTCTCAAATGCACACCAGATCCAGCAAAGCTTTTTCTAGACACATC CATGGCTTTGTGTCCTACAAACACCGAAGGAGGATACGAGTTCAAGATGCTGATTACTTC AGCTAGCTGCTCCTTATTGTTGAATCAGCTGAAGAAGCTCCTGCCTAAAATTGGACATCC TGTGAAAGGCGATGCGAAGAAACTTGCCGTTTACTGGAAAGATAAAATTGCAAAGAGCAA AAGAGATCAATTAGAAGTCATCTGCTTCCTACAGTTTCTTGGTATCTTTGGAATTGTGTC AGAGTTCAAGGCTGATGACCTTCTTGGTCTACTGGATAATTCTTATTGGCAAACTGTGTC TCCTGATCTTTGCCAGTTTCTCGGGTTGGACGACGCCATTCCAGGTTTCATTCAAAATCT CATAAAAACTGGACATCGTATCAAGGCAATAGACTACATATACTCATTTGGTATGGTCCA TAGATTCCAACCTGTATCCGCTATCATAAACGATTCCTTGAGGATTACAAAGGAATCTGC AGAGAAGTCGTATAGAGAAGCCAAGAACGAATCTACAACGCAGGTTGCAGCCATAGACAG ACAGGTTAGAGCACTAAGAGCCGCCATTAAATGCATATCGTGTCATAAACTCGAATCAGA GTTCCAACTCGGAGACCTTGAAGAACAAATCAAGTCGCTTTTGAAGCTCAGAAGAAACAC TTCTAATGGATCTGGATCCGGATCCGCATCGTCCAAACCCGATTCGACAATCAAACAATC TCAGACGGCAAAACCACCAACTGTAGCAGAGGTTGCTCCTGTTACTAGCAACATACCTTT GGAACCTTCAACAGAAGCTGCATCCTCCTCTGCGAGCAAACCGTTTTCAAAGAAGAATAA GAGAGGGAAAAAACGCAGCATGTCAGGAAACAATCAGAGCTCAGGACACATTGCTTCGCA CACAAGCAATCACTATCCCAGCCATGACTATTCCCTGAATCAAAGACTAACGTGGCCGGT CGACAACTACGACAGAGGTTTCACCGGATTTCCTAACCCCGACTACAATAATAACCAATG GGGACAACCAGAGGGACCTCAATTTTACCATCTTTATCAACCGCTAGATCCTCGCTACAG GAACTACTAGCCGCTACTTTACTATTAGGGTTCATGGAGGATTAAAGTCTCTTGATTTTT TTTCTTTTTTTTTGTAGGATTGCTAGATTTGATTCACCTCCGCTATTTTAGTCATAATCA AATGTCATGGTTATATAGTGTGAAACTAGATGTGATAAAAACACATGTAAATAGTAACTT TTGTACGTTCATTTTAATCTTTTGGGTTTTGTTTTTGTTTG