Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G25780.1
CDS Infomation	\| eukaryotic translation initiation factor 3B-2 \| Chr5:8973420-8976758 REVERSE LENGTH=2145 \| 201606
Sequence	ATGGCGGCGGTTGTTGATATTGATGTCCTAACAGCTCAGTTAGGGATTAATTGGTCAGAT GTTAATCTCGATTCAATCCAACTTCCTCCTGGAAACGACTTTGGGATCGAAAGTGATGAT GAAAGTGTTTACCAAGATGACCAGTCAGAATTCGACACTGGATTCGGTAACATTATCGTT GTCGATCACCTCCCTGTTGTTCCCAAGGAGAAGTTTGAGAAACTAGAAGGTGTTGTTAAG AAAATTTACAACCAGTTAGGTGTGATTAAGGAAAATGGACTGTTGATGCCCGTTGATCCC GATACTAAGATGACATTGGGCTACTGTTTTATTGAGTTCAACACTCCTCAGGAAGCACAA AACGCTAAGGAAAAGTCTCATGGCTACAAGTTGGACAAGTCTCACATATTTGCTGTTAAT ATGTTCGATGATTTCGATAGGTTGATGAATGTGAAGGAGGAGTGGGAGCCTCCTCAAGAA AGGCCCTATGTCCCTGGGGAAAATTTGCAGAAGTGGCTTACTGATGACAAAGCCCGGGAC CAGCTAGTCATTCGTTTTGGCCATGATACTGAAGTTTACTGGAATGATGCTAGGCAGAAG AAGCCTGAACCTGTTCATAAGCGTTCTTATTGGACAGAGAGTTATGTGCAGTGGTCTCCA ATAGGTACATACCTTGTGACACTTCACAAGCAGGGGGCAGCTGTTTGGGGTGGTGCTGAT ACATTTACGCGTCTCATGCGTTATCAGCATTCAATGGTCAAACTAGTTGATTTCTCGCCT GGTGAGAAATATCTTGTAACTTACCATAGCCAAGAACCAAGCAATCCGAGAGATGCAAGT AAAGTAGAGATTAAGGTCTTTGATGTGAGAACCGGGAGGATGATGAGAGATTTCAAGGGT AGTGCTGATGAGTTTTCAATTGGAGGACCTGGTGGTGTTGCTGGTGCCTCTTGGCCTGTT TTCAGATGGGCTGGCGGAAAAGATGATAAATACTTTGCCAAGCTGAGCAAAAACACTATC TCTGTCTATGAGACTGAGACTTTCAGCCTAATAGACAAGAAATCCATGAAGGTTGATAAT GTTGTGGATATTTGCTGGTCTCCCACTGATTCAATCCTTTCATTGTTTGTTCCTGAACAA GGTGGTGGAAACCAACCAGCCAAGGTTGCTCTAGTCCAAATCCCGAGTAAGGTAGAGCTG AGGCAGAAGAATCTCTTCAGTGTGAGCGACTGCAAGATGTACTGGCAGAGTAGTGGAGAG TATCTTGCTGTTAAGGTTGATCGATACACAAAAACTAAGAAGAGTACATACTCTGGATTT GAGCTTTTCCGTATCAAAGAAAGGGATATTCCAATCGAGGTTCTTGAGCTGGATAACAAG AACGATAAGATCATTGCTTTCGCGTGGGAGCCCAAGGGTCACAGGTTTGCTGTGATTCAT GGTGACCAGCCAAGACCGGATGTTAGTTTCTACTCGATGAAGACTGCACAAAACACTGGA AGAGTTTCAAAGCTCGCAACTTTGAAGGCCAAACAAGCCAATGCCCTCTTCTGGTCGCCC ACAGGCAAGTACATCATTCTTGCTGGGTTAAAAGGTTTCAATGGCCAGCTTGAATTTTTC AACGTGGATGAGCTCGAGACAATGGCCACAGCTGAACACTTCATGGCCACAGATATCGAA TGGGACCCAACTGGAAGGTACGTTGCAACCTCAGTGACAACAGTCCACGAGATGGAGAAT GGGTTCACCATATGGTCTTTCAATGGGAATATGGTTTACCGGATACTGAAGGATCATTTC TTCCAGTTGGCTTGGCGTCCAAGACCGGCATCATTCTTGACTGCGGAGAAGGAAGAAGAG ATAGCAAAGAACCTGAGGAATTACAGCAAGAGGTATGAGGCAGAGGATCAGGACGTGTCG TTGCTATTGAGTGAACAAGACAGAGAGAAGAGGAGGGCATTGAATGAAGAGTGGCAGAAA TGGGTGATGCAGTGGAAGTCTCTGCATGAAGAGGAGAAACTCGTGAGGCAAAATCTTCGG GATGGTGAAGTTAGTGATGTGGAAGAAGATGAGTATGAAGCCAAAGAAGTTGAGTTTGAG GATCTTATTGATGTTACTGAGGAAATTGTTCAAGAGTTGATGTAA

Peptide Sequence

PEP ID	AT5G25780.1
PEP Infomation	\| eukaryotic translation initiation factor 3B-2 \| Chr5:8973420-8976758 REVERSE LENGTH=714 \| 201606
Sequence	MAAVVDIDVLTAQLGINWSDVNLDSIQLPPGNDFGIESDDESVYQDDQSEFDTGFGNIIV VDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLLMPVDPDTKMTLGYCFIEFNTPQEAQ NAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQERPYVPGENLQKWLTDDKARD QLVIRFGHDTEVYWNDARQKKPEPVHKRSYWTESYVQWSPIGTYLVTLHKQGAAVWGGAD TFTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKG SADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDN VVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGE YLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIH GDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFF NVDELETMATAEHFMATDIEWDPTGRYVATSVTTVHEMENGFTIWSFNGNMVYRILKDHF FQLAWRPRPASFLTAEKEEEIAKNLRNYSKRYEAEDQDVSLLLSEQDREKRRALNEEWQK WVMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQELM

Transcript Sequence

Transcript ID	AT5G25780.1
Transcript Infomation	\| eukaryotic translation initiation factor 3B-2 \| Chr5:8973247-8976913 REVERSE LENGTH=2473 \| 201606
Sequence	AAATATTCTGTCTTCTTCATCAATCAACGGTTTAAGACTTAACACTGCAAACAAAACTCA AAACCCTAGGCACACACTCTCTCTCTCTCTCTATCCTCAAAGCTTCTTCTTCCTCGATAT CGATTGAGAGAAACTTCGTTCTAAGATTCGAAATCATGGCGGCGGTTGTTGATATTGATG TCCTAACAGCTCAGTTAGGGATTAATTGGTCAGATGTTAATCTCGATTCAATCCAACTTC CTCCTGGAAACGACTTTGGGATCGAAAGTGATGATGAAAGTGTTTACCAAGATGACCAGT CAGAATTCGACACTGGATTCGGTAACATTATCGTTGTCGATCACCTCCCTGTTGTTCCCA AGGAGAAGTTTGAGAAACTAGAAGGTGTTGTTAAGAAAATTTACAACCAGTTAGGTGTGA TTAAGGAAAATGGACTGTTGATGCCCGTTGATCCCGATACTAAGATGACATTGGGCTACT GTTTTATTGAGTTCAACACTCCTCAGGAAGCACAAAACGCTAAGGAAAAGTCTCATGGCT ACAAGTTGGACAAGTCTCACATATTTGCTGTTAATATGTTCGATGATTTCGATAGGTTGA TGAATGTGAAGGAGGAGTGGGAGCCTCCTCAAGAAAGGCCCTATGTCCCTGGGGAAAATT TGCAGAAGTGGCTTACTGATGACAAAGCCCGGGACCAGCTAGTCATTCGTTTTGGCCATG ATACTGAAGTTTACTGGAATGATGCTAGGCAGAAGAAGCCTGAACCTGTTCATAAGCGTT CTTATTGGACAGAGAGTTATGTGCAGTGGTCTCCAATAGGTACATACCTTGTGACACTTC ACAAGCAGGGGGCAGCTGTTTGGGGTGGTGCTGATACATTTACGCGTCTCATGCGTTATC AGCATTCAATGGTCAAACTAGTTGATTTCTCGCCTGGTGAGAAATATCTTGTAACTTACC ATAGCCAAGAACCAAGCAATCCGAGAGATGCAAGTAAAGTAGAGATTAAGGTCTTTGATG TGAGAACCGGGAGGATGATGAGAGATTTCAAGGGTAGTGCTGATGAGTTTTCAATTGGAG GACCTGGTGGTGTTGCTGGTGCCTCTTGGCCTGTTTTCAGATGGGCTGGCGGAAAAGATG ATAAATACTTTGCCAAGCTGAGCAAAAACACTATCTCTGTCTATGAGACTGAGACTTTCA GCCTAATAGACAAGAAATCCATGAAGGTTGATAATGTTGTGGATATTTGCTGGTCTCCCA CTGATTCAATCCTTTCATTGTTTGTTCCTGAACAAGGTGGTGGAAACCAACCAGCCAAGG TTGCTCTAGTCCAAATCCCGAGTAAGGTAGAGCTGAGGCAGAAGAATCTCTTCAGTGTGA GCGACTGCAAGATGTACTGGCAGAGTAGTGGAGAGTATCTTGCTGTTAAGGTTGATCGAT ACACAAAAACTAAGAAGAGTACATACTCTGGATTTGAGCTTTTCCGTATCAAAGAAAGGG ATATTCCAATCGAGGTTCTTGAGCTGGATAACAAGAACGATAAGATCATTGCTTTCGCGT GGGAGCCCAAGGGTCACAGGTTTGCTGTGATTCATGGTGACCAGCCAAGACCGGATGTTA GTTTCTACTCGATGAAGACTGCACAAAACACTGGAAGAGTTTCAAAGCTCGCAACTTTGA AGGCCAAACAAGCCAATGCCCTCTTCTGGTCGCCCACAGGCAAGTACATCATTCTTGCTG GGTTAAAAGGTTTCAATGGCCAGCTTGAATTTTTCAACGTGGATGAGCTCGAGACAATGG CCACAGCTGAACACTTCATGGCCACAGATATCGAATGGGACCCAACTGGAAGGTACGTTG CAACCTCAGTGACAACAGTCCACGAGATGGAGAATGGGTTCACCATATGGTCTTTCAATG GGAATATGGTTTACCGGATACTGAAGGATCATTTCTTCCAGTTGGCTTGGCGTCCAAGAC CGGCATCATTCTTGACTGCGGAGAAGGAAGAAGAGATAGCAAAGAACCTGAGGAATTACA GCAAGAGGTATGAGGCAGAGGATCAGGACGTGTCGTTGCTATTGAGTGAACAAGACAGAG AGAAGAGGAGGGCATTGAATGAAGAGTGGCAGAAATGGGTGATGCAGTGGAAGTCTCTGC ATGAAGAGGAGAAACTCGTGAGGCAAAATCTTCGGGATGGTGAAGTTAGTGATGTGGAAG AAGATGAGTATGAAGCCAAAGAAGTTGAGTTTGAGGATCTTATTGATGTTACTGAGGAAA TTGTTCAAGAGTTGATGTAAGTTTCTCGGTCTCTTTTGTTACCCTCTCTTAGTCTTCGAT CTCTTAGATATCGCGTTCTCCACACTTCGAAGAGAAATTTTGTTTCCTTTGGATATTGTT TTCATTATTTAAGTTTTCGTAATTACACTTGAAGGGTTAAGATTCTTAATACTAGACAAA TCTTGCGATCAAA