Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G25200.1
CDS Infomation	\| Ta11-like non-LTR retrotransposon \| Chr5:8716766-8717869 REVERSE LENGTH=1104 \| 201606
Sequence	ATGGCAGATGAGTTGTGGGATGAGATACAAAATCTAGAATTAGGACAAGAGGATCCAGCC CTTTTCATTCCCCATGAAGCTTATGTGATGGTTGAAGCTTCAAATAACTTAAGTCTGATA GCGAGACCTCTGAACCCAAGAGTTCAAAATCTTAACTCTGTCGTGGTAGCACTTCCAAGA TCATGGGGACTAACGACTCAGGTGCATGGAAGAGTTCTTGATGCAACGTATGTCCAGTTC CTTTTTGCAAATGAAATTGATCTGATGATGGTGCAAAGAAGGGAACCGTGGCTTTTCAAC AATTGGTTTGTGGCAGCAACTCGATGGCAGGTGGCTCCAGCTCACAACCTTGTCACTACC ATTGATCTCTGGGTGCAGATTAGAGGTATTCCCTTACCTTATGTTTCTGAAGAGACGGTT TTGGAGATAGCTCAAGATCTAGGAGAGATCATTTCACTAGACTTTCATGAGGCTACCTCT CCTCAGATTGCTTTTATTAGAGTTAGAGTTCGTTTTGGAATAACAGACAGACTGAGGTTT TTTCAAAGAATCATCTTCGATTCTGGTGAAACTGCAACCATAAGGTTCCAATACGAACGT CTCCGAAGACTCTGCAGTAGCTGTTTCAGGTTCACTCACAATCGAGCTTACTGTCCTTAT CGTCAACGTCCACTCAGCATCGCAAGAGAAAGAGCCCTATTCTGTGATAGTGTTCAAAGA TCATCAATGAATTCCCAGTCTCAAATGACTGAAAGTTCATTTCCAGTACCCATGACTCCA CCTCCAAGAGTTGATCCTCCTCCAATGAATCACTCTGAATTTGTAGCTGCTTATCCACAT CTTGCAACAGCTACAAATGTGAATTACAGGTTTACAGGAGACTCAAGCACCTCCAGACAA GACTTATCATCTGGTTCAAACAATATTCTGCCAAGAAGAACTACTCATTTCACAGACCAT CGAAGGTGCTTTGAAACTGGTCAATCCTCAAGACAAAATGAAAACAGAGAACCAAGAAGA CCTACAGAAAGAATGTTGCCTCCATCTCACTTTGATCATGTTCAACGCGCTGGAGGGATT CTGAAACCTCCAAAAAAACGCTAA

Peptide Sequence

PEP ID	AT5G25200.1
PEP Infomation	\| Ta11-like non-LTR retrotransposon \| Chr5:8716766-8717869 REVERSE LENGTH=367 \| 201606
Sequence	MADELWDEIQNLELGQEDPALFIPHEAYVMVEASNNLSLIARPLNPRVQNLNSVVVALPR SWGLTTQVHGRVLDATYVQFLFANEIDLMMVQRREPWLFNNWFVAATRWQVAPAHNLVTT IDLWVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRF FQRIIFDSGETATIRFQYERLRRLCSSCFRFTHNRAYCPYRQRPLSIARERALFCDSVQR SSMNSQSQMTESSFPVPMTPPPRVDPPPMNHSEFVAAYPHLATATNVNYRFTGDSSTSRQ DLSSGSNNILPRRTTHFTDHRRCFETGQSSRQNENREPRRPTERMLPPSHFDHVQRAGGI LKPPKKR

Transcript Sequence

Transcript ID	AT5G25200.1
Transcript Infomation	\| Ta11-like non-LTR retrotransposon \| Chr5:8716766-8717869 REVERSE LENGTH=1104 \| 201606
Sequence	ATGGCAGATGAGTTGTGGGATGAGATACAAAATCTAGAATTAGGACAAGAGGATCCAGCC CTTTTCATTCCCCATGAAGCTTATGTGATGGTTGAAGCTTCAAATAACTTAAGTCTGATA GCGAGACCTCTGAACCCAAGAGTTCAAAATCTTAACTCTGTCGTGGTAGCACTTCCAAGA TCATGGGGACTAACGACTCAGGTGCATGGAAGAGTTCTTGATGCAACGTATGTCCAGTTC CTTTTTGCAAATGAAATTGATCTGATGATGGTGCAAAGAAGGGAACCGTGGCTTTTCAAC AATTGGTTTGTGGCAGCAACTCGATGGCAGGTGGCTCCAGCTCACAACCTTGTCACTACC ATTGATCTCTGGGTGCAGATTAGAGGTATTCCCTTACCTTATGTTTCTGAAGAGACGGTT TTGGAGATAGCTCAAGATCTAGGAGAGATCATTTCACTAGACTTTCATGAGGCTACCTCT CCTCAGATTGCTTTTATTAGAGTTAGAGTTCGTTTTGGAATAACAGACAGACTGAGGTTT TTTCAAAGAATCATCTTCGATTCTGGTGAAACTGCAACCATAAGGTTCCAATACGAACGT CTCCGAAGACTCTGCAGTAGCTGTTTCAGGTTCACTCACAATCGAGCTTACTGTCCTTAT CGTCAACGTCCACTCAGCATCGCAAGAGAAAGAGCCCTATTCTGTGATAGTGTTCAAAGA TCATCAATGAATTCCCAGTCTCAAATGACTGAAAGTTCATTTCCAGTACCCATGACTCCA CCTCCAAGAGTTGATCCTCCTCCAATGAATCACTCTGAATTTGTAGCTGCTTATCCACAT CTTGCAACAGCTACAAATGTGAATTACAGGTTTACAGGAGACTCAAGCACCTCCAGACAA GACTTATCATCTGGTTCAAACAATATTCTGCCAAGAAGAACTACTCATTTCACAGACCAT CGAAGGTGCTTTGAAACTGGTCAATCCTCAAGACAAAATGAAAACAGAGAACCAAGAAGA CCTACAGAAAGAATGTTGCCTCCATCTCACTTTGATCATGTTCAACGCGCTGGAGGGATT CTGAAACCTCCAAAAAAACGCTAA