Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G24140.1
CDS Infomation	\| squalene monooxygenase 2 \| Chr5:8164547-8167675 REVERSE LENGTH=1557 \| 201606
Sequence	ATGGCAATGACTTACGCGTGGTTATGGACGCTTCTCGCCTTTGTTCTGACATGGATGGTT TTTCACCTCATCAAGATGAAGAAGGCGGCAACCGGAGATTTAGAGGCCGAGGCAGAAGCA AGAAGAGATGGTGCAACGGATGTCATCATTGTTGGGGCGGGTGTTGCAGGCGCTTCTCTT GCTTATGCTTTAGCTAAGGATGGACGACGAGTACATGTGATAGAGAGGGACTTAAAAGAG CCACAAAGATTCATGGGAGAGCTGATGCAAGCGGGAGGTCGCTTCATGTTAGCCCAGCTT GGCCTCGAAGATTGTTTGGAGGACATAGACGCACAAGAAGCGAAGTCCTTGGCAATATAC AAGGATGGAAAACACGCGACATTGCCTTTTCCAGATGACAAGAGTTTTCCTCATGAGCCA GTAGGTAGACTCTTACGTAATGGTCGGCTGGTACAACGTTTACGCCAAAAAGCAGCTTCT CTTAGCAATGTTCAATTAGAAGAAGGAACAGTGAAGTCTTTAATTGAAGAAGAAGGAGTG GTCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAATAACGGCCTTTGCACCTCTT ACTGTCGTATGCGATGGTTGTTATTCGAACCTTCGTCGGTCACTCGTGGATAATACTGAG GAAGTCCTCTCGTACATGGTGGGTTACGTCACGAAGAATAGCCGACTTGAAGATCCCCAT AGTCTACATTTGATATTTTCTAAACCTTTGGTTTGTGTTATATATCAAATAACCAGTGAT GAAGTTCGTTGTGTTGCCGAAGTTCCCGCTGATAGTATTCCTTCTATATCGAATGGTGAA ATGTCTACCTTCCTCAAGAAATCAATGGCTCCTCAGATACCTGAAACTGGAAATCTTCGG GAGATATTTTTGAAAGGCATAGAGGAAGGATTACCAGAGATAAAATCAACAGCGACGAAA AGTATGTCATCGAGATTGTGTGATAAAAGAGGAGTGATTGTGTTGGGAGATGCATTCAAT ATGCGTCATCCTATAATCGCGTCAGGAATGATGGTTGCACTCTCGGACATTTGCATTCTA CGCAATCTTCTCAAACCATTGCCTAACCTCAGCAATACTAAGAAAGTCTCTGATCTTGTC AAGTCCTTTTACATCATCCGCAAGCCAATGTCAGCGACCGTGAACACGCTCGCGAGTATC TTTTCACAAGTGCTTGTTGCTACAACAGACGAAGCAAGAGAGGGAATGCGACAAGGCTGC TTCAATTACCTAGCTCGTGGAGATTTTAAAACAAGGGGATTGATGACTATTCTCGGAGGC ATGAACCCTCACCCTCTTACTCTAGTCCTTCATCTTGTAGCCATCACCCTTACGTCCATG GGCCACTTGCTCTCTCCGTTTCCTTCGCCTCGTCGCTTTTGGCATAGCCTCAGAATTCTT GCCTGGGCTTTGCAAATGTTGGGTGCACATTTAGTGGATGAAGGATTCAAGGAAATGTTG ATTCCAACAAACGCAGCTGCTTATCGAAGGAACTATATCGCCACAACCACTGTTTGA

Peptide Sequence

PEP ID	AT5G24140.1
PEP Infomation	\| squalene monooxygenase 2 \| Chr5:8164547-8167675 REVERSE LENGTH=518 \| 201606
Sequence	MAMTYAWLWTLLAFVLTWMVFHLIKMKKAATGDLEAEAEARRDGATDVIIVGAGVAGASL AYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIY KDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGV VKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPH SLHLIFSKPLVCVIYQITSDEVRCVAEVPADSIPSISNGEMSTFLKKSMAPQIPETGNLR EIFLKGIEEGLPEIKSTATKSMSSRLCDKRGVIVLGDAFNMRHPIIASGMMVALSDICIL RNLLKPLPNLSNTKKVSDLVKSFYIIRKPMSATVNTLASIFSQVLVATTDEAREGMRQGC FNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLLSPFPSPRRFWHSLRIL AWALQMLGAHLVDEGFKEMLIPTNAAAYRRNYIATTTV

Transcript Sequence

Transcript ID	AT5G24140.1
Transcript Infomation	\| squalene monooxygenase 2 \| Chr5:8164319-8167776 REVERSE LENGTH=1886 \| 201606
Sequence	ATAGTTTATTACATATTTTGGCTTGTTTGACATTGTGGGTTTCTCCTATATATTTAACGT TCACTCCAGGTACAAGGCATATATATTATTACTAAGCGGTAATGGCAATGACTTACGCGT GGTTATGGACGCTTCTCGCCTTTGTTCTGACATGGATGGTTTTTCACCTCATCAAGATGA AGAAGGCGGCAACCGGAGATTTAGAGGCCGAGGCAGAAGCAAGAAGAGATGGTGCAACGG ATGTCATCATTGTTGGGGCGGGTGTTGCAGGCGCTTCTCTTGCTTATGCTTTAGCTAAGG ATGGACGACGAGTACATGTGATAGAGAGGGACTTAAAAGAGCCACAAAGATTCATGGGAG AGCTGATGCAAGCGGGAGGTCGCTTCATGTTAGCCCAGCTTGGCCTCGAAGATTGTTTGG AGGACATAGACGCACAAGAAGCGAAGTCCTTGGCAATATACAAGGATGGAAAACACGCGA CATTGCCTTTTCCAGATGACAAGAGTTTTCCTCATGAGCCAGTAGGTAGACTCTTACGTA ATGGTCGGCTGGTACAACGTTTACGCCAAAAAGCAGCTTCTCTTAGCAATGTTCAATTAG AAGAAGGAACAGTGAAGTCTTTAATTGAAGAAGAAGGAGTGGTCAAAGGAGTGACATACA AAAATAGCGCAGGCGAAGAAATAACGGCCTTTGCACCTCTTACTGTCGTATGCGATGGTT GTTATTCGAACCTTCGTCGGTCACTCGTGGATAATACTGAGGAAGTCCTCTCGTACATGG TGGGTTACGTCACGAAGAATAGCCGACTTGAAGATCCCCATAGTCTACATTTGATATTTT CTAAACCTTTGGTTTGTGTTATATATCAAATAACCAGTGATGAAGTTCGTTGTGTTGCCG AAGTTCCCGCTGATAGTATTCCTTCTATATCGAATGGTGAAATGTCTACCTTCCTCAAGA AATCAATGGCTCCTCAGATACCTGAAACTGGAAATCTTCGGGAGATATTTTTGAAAGGCA TAGAGGAAGGATTACCAGAGATAAAATCAACAGCGACGAAAAGTATGTCATCGAGATTGT GTGATAAAAGAGGAGTGATTGTGTTGGGAGATGCATTCAATATGCGTCATCCTATAATCG CGTCAGGAATGATGGTTGCACTCTCGGACATTTGCATTCTACGCAATCTTCTCAAACCAT TGCCTAACCTCAGCAATACTAAGAAAGTCTCTGATCTTGTCAAGTCCTTTTACATCATCC GCAAGCCAATGTCAGCGACCGTGAACACGCTCGCGAGTATCTTTTCACAAGTGCTTGTTG CTACAACAGACGAAGCAAGAGAGGGAATGCGACAAGGCTGCTTCAATTACCTAGCTCGTG GAGATTTTAAAACAAGGGGATTGATGACTATTCTCGGAGGCATGAACCCTCACCCTCTTA CTCTAGTCCTTCATCTTGTAGCCATCACCCTTACGTCCATGGGCCACTTGCTCTCTCCGT TTCCTTCGCCTCGTCGCTTTTGGCATAGCCTCAGAATTCTTGCCTGGGCTTTGCAAATGT TGGGTGCACATTTAGTGGATGAAGGATTCAAGGAAATGTTGATTCCAACAAACGCAGCTG CTTATCGAAGGAACTATATCGCCACAACCACTGTTTGATCAATCCATAACACGAAGACTG TTTTATTCGGAGATGAAAAATAACAACTCAAACAGTTAACTTTCTACAACCAAATAAATA ATTGTGTGTATATGAAGTTGAGCCTATGGTTAAGCTCTACTGAATTGTGTTGAAAACAAA CATGGATATGTTACATGCTAATTTGTTATATTCTATTTATTGATTCTTGATTTTCTGCTT ATGAAATTTTCTAATGTTTAGTCCAG