Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G22450.1
CDS Infomation	\| spectrin beta chain%2C brain \| Chr5:7437145-7442856 REVERSE LENGTH=3465 \| 201606
Sequence	ATGCTAGGTTCTGGTAACAATTTGAGCAGGGGTACTATAGGATTGTCATCTGATACCCCA AATTTGTCTCAAGTTTTAACATTGGAACCGATTAGATTAGGGAATCAGAACTATACTCGT TCAGGAGAGCTTAGAAGGGTTCTCGGTGTTCCTAGTAGAGCTTCATCGGAAGATAATTCT TTTGGGATGTCTCATCCCAGACCTTCTCCTCCTGTGGCAACTGAGGAGCTTAAGCATTTT AAAGAAAGTGTGCTAGATACTTCCAGAGAAGCTGGGGATCTAGTAAAGAAACTAAGTGAA AACATATTCAAGTTGGACAAATACGCGGAGACAATAAATTCAAAGAAGCGACGGCGAAAT GATATACCACCCGGTGAGAGAATGGACGCAGCAACCTTTGATAAGGTCAGAAACCAGGTT CCAAGAACACAAGACATTATGGCTCAAAGATCCGAGGAAAGGAAAAAGATGCTTGGATTA AACAAGCGTGCTCGTACGACCGTCGCAGATGTGCGGGGGGATGCTAGAATTTCTGCTCTT GCAAGGCAGCACGTTATTGAAAAGGGCTCTGATTCACCTCCAAGTGTTTCTGGAGAATCA GTGCGAATAGAAGAGAAGATACGCAGATTACCTGTGGGTGGTGAAGGATGGGAGACAAGA ATGAAAAGAAAACGGTCTGTTGCTACTCTAGGCAACAGAATTATGAATCCTGAACAACGT GTTATGCAGCCAAAGCCAACAGCTGACTCTAAGTTGCGTTCTTGTGACTCCCAAAATTTC AGATCGAAATCTTCACCCGGGGTGAGTGGGATCAACAGACTTGATACTTCGTTTGAGCCA GACAGTCCATGTATGGGTGCATTATCCAGGAATGAGTTGGAGACTGTTTCCATTGCAAGG GATCGGTCAGTACTTGCTGAGCAGAGGCTAGCCAAGGGAAATAATAAGAGAAACTTACTG GATGATAGTCCCACAAACAGCTCTACTGCAATATTGAAAGGAAAAGTTTCTAGGGCTCCA AGAACAGCAGCCATTATGGGTGTTGAATCTTCAGCCAAAGTTGATTCCCCATCCGGTGTA TTACAAGGTTCATCTGCACATGCAATGGCTCAATGGGTTGGCCAGAGACCGCATAAGAAT TCTCGAACAAGGAGAACAAATGTAGTTTCGCCTGTAATAAAGCATTCTGAAAGCAAGATC TCAGGTCAAGGTTTTGCAACATCTGATTTTAGTCCTAGAGCATCCCCTGGAACCACTGGG CCACTCTCAGTTGTTGATAGTAGCCCTTTAAAAATGAAAAGGGAGTTGAGGAATGCTTCA TCGCCATATGGGTTATCTGAAAGTGAGGACTCAGGAGCTGGAGACAATAAAACAAGAGAG CGTGCTTTTGCGAGTGGTGACTTGTTCACAACTCCTAAATCAGGGTCGCTATTACTTCCG ACAAGGAAAAACAAGATTCAAACCAGTCATAAAGGAGGTGGTGCATGGAAGCAAGGAAAG AGTGAAAGTGTCTCGTCGTTGACAACTCCTGGCTTTCATCCTATCATGGTTAAGTCAGAG AATTTACCAGTAGAGAAGCCTTTTCACAATATCAAGATTGCCTCAGATAAGAATAGAAGC AAATATGGGCGTCCACCTGCAAAAAAAGTTAAAGATCGTAAACCTGCTACTCGGCTTGCC TCAAATGCAAATACTCCTTCAGATATTACAGGTGAATCTGATGATGATCGTGAAGATATT TTTGCAGCAGCAAATTCGGCACGGAAGGCAGCAAATCTTGCTTGTTCTGGTAAGTTTTGG AAGAAGATGGACCACATCTTTGCTGCTGTCAATGTAGACGACATGCAAAACATGAAAGAT CAGCTGAATTTTGCGCAAGAACTCGATAAATCTCTGTCAGACGCAATCTTAGATGGTTAT AACATCTTGGGTCTTAAATTGCCCAAAGCAGTACATCGCCCTGGTGTGGGAAATGTTGAC TATTCAGGTCCAACCTCATCATGTGTATCTGGTCTTTCATTCGAGAGATTGGACATGAGA AAATTAAATGAGAGTACTCCATTGTATAAGAGGGTACTTTCTGCTTTAATTGAGGAAGAT GATGGAGAAGAAGTTGTACAATTCAATGGAGGGAAGAATCTGTCTCTTCATTACGCTAGT GACGATTCTCACTGTGGTTCATGTACCTATATTGACACCGAGTTCAGAGAGAGAGACAGA ATGGAATTTGAAGTAGAGTCAAGTGGGGATTTTCAGACCCCTAAGAGCGGTTTGTTTGAC AGATTTTCCAGTGAGAGGAGTGTTGTGTCTAACCCTTTCAGAAATGGTGGCATGTCTATA TCTGTGCATAGCAATGAACAGTGGATTGGGGATGATGATCTTTCACATTCAGACGCTGCA CTCGGTAATGAGACATATTCAAATAGTCTGGGTCAATTGCAAGCTAGGGAAGTGAACATT CCCAACTTCCCGGTTTCTGACACCCAGTATCAGCTTATGTCTTTGGATGAGCGACTTCTT CTGGAACTACAGAGCATTGGTGTGTTTCCTGAGGCAATGCCTGATCTGGCTGAAGAAACT ATGAGCACTGATGTTATGGAGTTGAAGGAAGGCATTTATCAGGAGATCCTAAACAAGAAG AAAAAGCTGGAGAAGCTTATCATTACCATCCAGAAGGGGAAAGATGTTGAGAAAAGGAAA ATTGAGCATCTTGCTATGGACCAACTTGTGGAAACAGCCCACAAGAAAAGAATGGCATGC CGTGGAAGTAAAGCAGCTAAAGTCAACAAGGTTACAAGACAAGTGGCGCTGGGGTTCATT AGGCGGACAGTTGCTAGGTGTCGTAAGTTCGAAGAAACTGGGTTTAGCTGTTTTTCTGAT CCCGCACTTCAAGATATCTTGTTTAGTTCTCCCAGCAACGATGCAAAATCATCAGAAAAT GGCGGCTCTGGAACAGCCAGTAACACGCTCAATGAACCTTCTAATCATCAGGCTGAGGCC AAGGGTTCAGGTGCAGTGTCTAGTACAAAGAGGAGAGAAGCATTGATAGATGATGTTATC GGATGCGCTTCCTCCAAAGTCACAACGAGCAAAGGCAGTGCCGTTCTTAGTGGAGGAGGG GCTCAAGGTAAAAGAAGCGAGAGAGAAGATGGTTTCAGGAACAAGAACAAACCAAAACCA AAAGAAAACAACAACAACAACAACGGAAACCAATCAAGGTCGACAACAACATCAACACAC CCAACAGGACCAGCAAGCAGAGGGGCCTCAAACCGAGGAGTTACCTCTGGAGATGGTGCA GTCGACGACGAAGCTCCCATAGATTTCTCGAAATTAGCGTTCCGTGATCTAGACGAAATA GATGAACAGGCAGATCTTGGAAACTGGTTCGAGGGTCTTCAGGATATTGATACAGCAGGT CTTGATGAGGTTCCTATGGATGATCTCTCGTTTATGTTTGGATAA

Peptide Sequence

PEP ID	AT5G22450.1
PEP Infomation	\| spectrin beta chain%2C brain \| Chr5:7437145-7442856 REVERSE LENGTH=1154 \| 201606
Sequence	MLGSGNNLSRGTIGLSSDTPNLSQVLTLEPIRLGNQNYTRSGELRRVLGVPSRASSEDNS FGMSHPRPSPPVATEELKHFKESVLDTSREAGDLVKKLSENIFKLDKYAETINSKKRRRN DIPPGERMDAATFDKVRNQVPRTQDIMAQRSEERKKMLGLNKRARTTVADVRGDARISAL ARQHVIEKGSDSPPSVSGESVRIEEKIRRLPVGGEGWETRMKRKRSVATLGNRIMNPEQR VMQPKPTADSKLRSCDSQNFRSKSSPGVSGINRLDTSFEPDSPCMGALSRNELETVSIAR DRSVLAEQRLAKGNNKRNLLDDSPTNSSTAILKGKVSRAPRTAAIMGVESSAKVDSPSGV LQGSSAHAMAQWVGQRPHKNSRTRRTNVVSPVIKHSESKISGQGFATSDFSPRASPGTTG PLSVVDSSPLKMKRELRNASSPYGLSESEDSGAGDNKTRERAFASGDLFTTPKSGSLLLP TRKNKIQTSHKGGGAWKQGKSESVSSLTTPGFHPIMVKSENLPVEKPFHNIKIASDKNRS KYGRPPAKKVKDRKPATRLASNANTPSDITGESDDDREDIFAAANSARKAANLACSGKFW KKMDHIFAAVNVDDMQNMKDQLNFAQELDKSLSDAILDGYNILGLKLPKAVHRPGVGNVD YSGPTSSCVSGLSFERLDMRKLNESTPLYKRVLSALIEEDDGEEVVQFNGGKNLSLHYAS DDSHCGSCTYIDTEFRERDRMEFEVESSGDFQTPKSGLFDRFSSERSVVSNPFRNGGMSI SVHSNEQWIGDDDLSHSDAALGNETYSNSLGQLQAREVNIPNFPVSDTQYQLMSLDERLL LELQSIGVFPEAMPDLAEETMSTDVMELKEGIYQEILNKKKKLEKLIITIQKGKDVEKRK IEHLAMDQLVETAHKKRMACRGSKAAKVNKVTRQVALGFIRRTVARCRKFEETGFSCFSD PALQDILFSSPSNDAKSSENGGSGTASNTLNEPSNHQAEAKGSGAVSSTKRREALIDDVI GCASSKVTTSKGSAVLSGGGAQGKRSEREDGFRNKNKPKPKENNNNNNGNQSRSTTTSTH PTGPASRGASNRGVTSGDGAVDDEAPIDFSKLAFRDLDEIDEQADLGNWFEGLQDIDTAG LDEVPMDDLSFMFG

Transcript Sequence

Transcript ID	AT5G22450.1
Transcript Infomation	\| spectrin beta chain%2C brain \| Chr5:7436932-7443463 REVERSE LENGTH=4089 \| 201606
Sequence	GCCGTGTGAAACTGAGAGAGAATGATGACGTCATCAATCTGTGTACATAAATGTTAATGG ACGTAGCAAAATTCGCCCAACCAAAACAATCCGACTAAAAGGGAACTTTTTTTTTTCCGT CTGATCTAAAACAACAACAACGAAAGCTTGACCTCGTTGAAAATCTTCGGGTGAGATATT TTTCAAAGCTTTGGTCTTTGTCTGAATTACGCTTTTTGGATTCTCCGAGCTTAATAATAG CGAAAGTTCGTTTCTTTGGGTTCTTCTCCGCGATTCTAGGGTTTTTCCAATTTCTCGCCG GCGTTGAGGAATTTTAGGGTTTTCGTGTTGTTTGTCTTTGATTCATGGCTTGGGCTTAGA TGGAAAGGTTTGAGTTGCTTTTGGAGTGAAGCAAGTAGACCAAAGGGCATAATGCTAGGT TCTGGTAACAATTTGAGCAGGGGTACTATAGGATTGTCATCTGATACCCCAAATTTGTCT CAAGTTTTAACATTGGAACCGATTAGATTAGGGAATCAGAACTATACTCGTTCAGGAGAG CTTAGAAGGGTTCTCGGTGTTCCTAGTAGAGCTTCATCGGAAGATAATTCTTTTGGGATG TCTCATCCCAGACCTTCTCCTCCTGTGGCAACTGAGGAGCTTAAGCATTTTAAAGAAAGT GTGCTAGATACTTCCAGAGAAGCTGGGGATCTAGTAAAGAAACTAAGTGAAAACATATTC AAGTTGGACAAATACGCGGAGACAATAAATTCAAAGAAGCGACGGCGAAATGATATACCA CCCGGTGAGAGAATGGACGCAGCAACCTTTGATAAGGTCAGAAACCAGGTTCCAAGAACA CAAGACATTATGGCTCAAAGATCCGAGGAAAGGAAAAAGATGCTTGGATTAAACAAGCGT GCTCGTACGACCGTCGCAGATGTGCGGGGGGATGCTAGAATTTCTGCTCTTGCAAGGCAG CACGTTATTGAAAAGGGCTCTGATTCACCTCCAAGTGTTTCTGGAGAATCAGTGCGAATA GAAGAGAAGATACGCAGATTACCTGTGGGTGGTGAAGGATGGGAGACAAGAATGAAAAGA AAACGGTCTGTTGCTACTCTAGGCAACAGAATTATGAATCCTGAACAACGTGTTATGCAG CCAAAGCCAACAGCTGACTCTAAGTTGCGTTCTTGTGACTCCCAAAATTTCAGATCGAAA TCTTCACCCGGGGTGAGTGGGATCAACAGACTTGATACTTCGTTTGAGCCAGACAGTCCA TGTATGGGTGCATTATCCAGGAATGAGTTGGAGACTGTTTCCATTGCAAGGGATCGGTCA GTACTTGCTGAGCAGAGGCTAGCCAAGGGAAATAATAAGAGAAACTTACTGGATGATAGT CCCACAAACAGCTCTACTGCAATATTGAAAGGAAAAGTTTCTAGGGCTCCAAGAACAGCA GCCATTATGGGTGTTGAATCTTCAGCCAAAGTTGATTCCCCATCCGGTGTATTACAAGGT TCATCTGCACATGCAATGGCTCAATGGGTTGGCCAGAGACCGCATAAGAATTCTCGAACA AGGAGAACAAATGTAGTTTCGCCTGTAATAAAGCATTCTGAAAGCAAGATCTCAGGTCAA GGTTTTGCAACATCTGATTTTAGTCCTAGAGCATCCCCTGGAACCACTGGGCCACTCTCA GTTGTTGATAGTAGCCCTTTAAAAATGAAAAGGGAGTTGAGGAATGCTTCATCGCCATAT GGGTTATCTGAAAGTGAGGACTCAGGAGCTGGAGACAATAAAACAAGAGAGCGTGCTTTT GCGAGTGGTGACTTGTTCACAACTCCTAAATCAGGGTCGCTATTACTTCCGACAAGGAAA AACAAGATTCAAACCAGTCATAAAGGAGGTGGTGCATGGAAGCAAGGAAAGAGTGAAAGT GTCTCGTCGTTGACAACTCCTGGCTTTCATCCTATCATGGTTAAGTCAGAGAATTTACCA GTAGAGAAGCCTTTTCACAATATCAAGATTGCCTCAGATAAGAATAGAAGCAAATATGGG CGTCCACCTGCAAAAAAAGTTAAAGATCGTAAACCTGCTACTCGGCTTGCCTCAAATGCA AATACTCCTTCAGATATTACAGGTGAATCTGATGATGATCGTGAAGATATTTTTGCAGCA GCAAATTCGGCACGGAAGGCAGCAAATCTTGCTTGTTCTGGTAAGTTTTGGAAGAAGATG GACCACATCTTTGCTGCTGTCAATGTAGACGACATGCAAAACATGAAAGATCAGCTGAAT TTTGCGCAAGAACTCGATAAATCTCTGTCAGACGCAATCTTAGATGGTTATAACATCTTG GGTCTTAAATTGCCCAAAGCAGTACATCGCCCTGGTGTGGGAAATGTTGACTATTCAGGT CCAACCTCATCATGTGTATCTGGTCTTTCATTCGAGAGATTGGACATGAGAAAATTAAAT GAGAGTACTCCATTGTATAAGAGGGTACTTTCTGCTTTAATTGAGGAAGATGATGGAGAA GAAGTTGTACAATTCAATGGAGGGAAGAATCTGTCTCTTCATTACGCTAGTGACGATTCT CACTGTGGTTCATGTACCTATATTGACACCGAGTTCAGAGAGAGAGACAGAATGGAATTT GAAGTAGAGTCAAGTGGGGATTTTCAGACCCCTAAGAGCGGTTTGTTTGACAGATTTTCC AGTGAGAGGAGTGTTGTGTCTAACCCTTTCAGAAATGGTGGCATGTCTATATCTGTGCAT AGCAATGAACAGTGGATTGGGGATGATGATCTTTCACATTCAGACGCTGCACTCGGTAAT GAGACATATTCAAATAGTCTGGGTCAATTGCAAGCTAGGGAAGTGAACATTCCCAACTTC CCGGTTTCTGACACCCAGTATCAGCTTATGTCTTTGGATGAGCGACTTCTTCTGGAACTA CAGAGCATTGGTGTGTTTCCTGAGGCAATGCCTGATCTGGCTGAAGAAACTATGAGCACT GATGTTATGGAGTTGAAGGAAGGCATTTATCAGGAGATCCTAAACAAGAAGAAAAAGCTG GAGAAGCTTATCATTACCATCCAGAAGGGGAAAGATGTTGAGAAAAGGAAAATTGAGCAT CTTGCTATGGACCAACTTGTGGAAACAGCCCACAAGAAAAGAATGGCATGCCGTGGAAGT AAAGCAGCTAAAGTCAACAAGGTTACAAGACAAGTGGCGCTGGGGTTCATTAGGCGGACA GTTGCTAGGTGTCGTAAGTTCGAAGAAACTGGGTTTAGCTGTTTTTCTGATCCCGCACTT CAAGATATCTTGTTTAGTTCTCCCAGCAACGATGCAAAATCATCAGAAAATGGCGGCTCT GGAACAGCCAGTAACACGCTCAATGAACCTTCTAATCATCAGGCTGAGGCCAAGGGTTCA GGTGCAGTGTCTAGTACAAAGAGGAGAGAAGCATTGATAGATGATGTTATCGGATGCGCT TCCTCCAAAGTCACAACGAGCAAAGGCAGTGCCGTTCTTAGTGGAGGAGGGGCTCAAGGT AAAAGAAGCGAGAGAGAAGATGGTTTCAGGAACAAGAACAAACCAAAACCAAAAGAAAAC AACAACAACAACAACGGAAACCAATCAAGGTCGACAACAACATCAACACACCCAACAGGA CCAGCAAGCAGAGGGGCCTCAAACCGAGGAGTTACCTCTGGAGATGGTGCAGTCGACGAC GAAGCTCCCATAGATTTCTCGAAATTAGCGTTCCGTGATCTAGACGAAATAGATGAACAG GCAGATCTTGGAAACTGGTTCGAGGGTCTTCAGGATATTGATACAGCAGGTCTTGATGAG GTTCCTATGGATGATCTCTCGTTTATGTTTGGATAAGGAGAAAACAAACCACATTTGACA GGAGCGAAATTGGTCTTGACTCTTGACACAAACACCCACACCCACAAGTATTCTTATGAT TTTGTTTTCTAACTAGTTTTGTATATAAAGAAAGATTTGTAGTGAATAGGAATGATTGTC TGCCTTCTAGGCTGAGTATTGTTTCAACTATGATTTAAAATATATATATAACATATGTAT TTTCTTCTT