Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G22260.1
CDS Infomation

| RING/FYVE/PHD zinc finger superfamily protein | Chr5:7367707-7370192 REVERSE LENGTH=2019 | 201606
Sequence

ATGGCGAATCTGATTCGAACAGACCATCAGCAACATATTCCAAAGAAGAGGAAGAGAGGG
GAAAGTAGAGTTTTTAGGCTGAAGACGTTCGGAGAGTCTGGACATCCAGCTGAGATGAAC
GAGTTGTCTTTTCGAGATAACCTCGCTAAACTACTTGAGTTTGGTCACTTTGAGAGCTCC
GGTCTAATGGGAAGTTGGTCTTTTCAGCTCGAGATTCAACGAAATCCAAATCCTCTCTAT
GTTCTTCTCTTTGTCGTAGAAGAGCCCATCGAAGCCTCTCTCAATCTCCGTTGCAACCAT
TGCCAATATGTTGGTTGGGGAAATCAAATGATATGCAACAAGAAGTACCATTTCGTGATC
CCCTCAAAGGAAACAATGGCGGCTTTTTTAAAACTGGAAGGTGGAGGCTACGCTTTTCCC
GAAAAGGAAAGTTTCTCCCATCTTGTGGAGCTTCAAGGCCATGTCCTTCACGGCTTCTTT
CACTCCAACGGATTTGGTCACTTGCTCTCTCTCAACGGCATTGAAACCGGCTCCGACTTA
ACCGGTCATCAGGTCATGGATTTGTGGGACCGGCTCTGCACCGGTTTAAAGGCCAGGAAA
ATAGGGTTGAATGACGCGTCGCACAAAAAAGGAATGGAGTTGAGGCTGCTGCATGGGGTA
GCAAAAGGAGAGCCATGGTTCGGTCGTTGGGGCTACCGGTTCGGGTCAGGGACATACGGA
GTGACTCAAAAGATTTACGAGAAGGCACTTGAGTCGGTCCGTAACATACCCTTGTGCTTG
CTTAACCATCACCTAACCAGCCTTAACCGAGAAACTCCAATCCTCTTGTCAAAGTACCAA
AGTTTATCCACCGAGCCATTGATCACTCTCAGTGACCTCTTCAGGTTCATGCTTCATCTC
CATTCACGTCTTCCAAGAGATAACTACATGAGTAACTCCCGAAACCAAATCATCTCCATT
GATAGTACCAACTGCAGATGGTCTCAAAAACGGATCCAAATGGCTATCAAAGTGGTCATA
GAGTCACTGAAAAGAGTCGAATACCGATGGATATCGAGACAAGAAGTGAGGGATGCAGCT
AGAAATTACATTGGGGACACTGGTTTGCTTGATTTTGTGTTGAAGTCGCTTGGGAACCAG
GTGGTTGGAAACTATTTGGTCCGACGTAGTCTAAATCCGGTGAAGAAAGTGCTAGAGTAT
TCCTTGGAGGATATATCAAATTTGTTACCAAGTAGTAACAATGAACTCATAACCCTTCAA
AACCAAAACTCAATGGGGAAGATGGCGACAAACGGTCACAATAAGATCACAAGAGGTCAA
GTTATGAAAGACATGTTTTATTTTTACAAACACATTCTCATGGACTACAAGGGAGTGTTA
GGCCCCATAGGAGGTATATTGAACCAAATCGGAATGGCTTCAAGAGCAATCCTCGACGCT
AAGTACTTCATCAAAGAGTATCACTACATTAGAGATACATCGGCGAAAACGTTACACTTA
GATCGAGGGGAAGAATTAGGAATATTCTGCACGATCGCGTGGAAATGTCATCATCATAAC
AACGAGATAAAAGTTCCTCCACAAGAATGCATTGTAGTGAAGAAAGATGCAACATTGAGT
GAAGTGTACGGAGAGGCAGAAAGAGTGTTTAGAGATATCTATTGGGAACTAAGAGACGTC
GTGGTGGAGTCAGTGGTGGGTGGTCAAATAGAGATCACAAGGGTCGATGAAATGGCCTTG
AATGGGAATAAGGGATTGGTGTTAGAAGGGAACGTAGGAATGATGATGAACATTGAAGTG
ACGAAATGTTATGAAGATGATGATAAAAAGAAGGATAAGAGAATAGAGTGTGAGTGTGGA
GCAACGGAAGAAGATGGAGAGAGAATGGTGTGTTGTGATATTTGTGAAGTATGGCAACAC
ACAAGGTGTGTTGGTGTTCAACACAATGAGGAAGTGCCTCGCATTTTTCTTTGTCAAAGT
TGTGATCAACATCTTATTCCTCTCTCTTTTTTACCCTAA

Peptide Sequence

PEP ID

AT5G22260.1
PEP Infomation

| RING/FYVE/PHD zinc finger superfamily protein | Chr5:7367707-7370192 REVERSE LENGTH=672 | 201606
Sequence

MANLIRTDHQQHIPKKRKRGESRVFRLKTFGESGHPAEMNELSFRDNLAKLLEFGHFESS
GLMGSWSFQLEIQRNPNPLYVLLFVVEEPIEASLNLRCNHCQYVGWGNQMICNKKYHFVI
PSKETMAAFLKLEGGGYAFPEKESFSHLVELQGHVLHGFFHSNGFGHLLSLNGIETGSDL
TGHQVMDLWDRLCTGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYG
VTQKIYEKALESVRNIPLCLLNHHLTSLNRETPILLSKYQSLSTEPLITLSDLFRFMLHL
HSRLPRDNYMSNSRNQIISIDSTNCRWSQKRIQMAIKVVIESLKRVEYRWISRQEVRDAA
RNYIGDTGLLDFVLKSLGNQVVGNYLVRRSLNPVKKVLEYSLEDISNLLPSSNNELITLQ
NQNSMGKMATNGHNKITRGQVMKDMFYFYKHILMDYKGVLGPIGGILNQIGMASRAILDA
KYFIKEYHYIRDTSAKTLHLDRGEELGIFCTIAWKCHHHNNEIKVPPQECIVVKKDATLS
EVYGEAERVFRDIYWELRDVVVESVVGGQIEITRVDEMALNGNKGLVLEGNVGMMMNIEV
TKCYEDDDKKKDKRIECECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQS
CDQHLIPLSFLP

Transcript Sequence

Transcript ID

AT5G22260.1
Transcript Infomation

| RING/FYVE/PHD zinc finger superfamily protein | Chr5:7367635-7370295 REVERSE LENGTH=2194 | 201606
Sequence

ACTTTTCGGTCTCTTCTTATAACAAACCCCATCATAATATATATCCAAATCTATCATATT
CCTATTCCCTCTCTTCTCAAGATCAAACCAAATTTCTGATTCGATGGCGAATCTGATTCG
AACAGACCATCAGCAACATATTCCAAAGAAGAGGAAGAGAGGGGAAAGTAGAGTTTTTAG
GCTGAAGACGTTCGGAGAGTCTGGACATCCAGCTGAGATGAACGAGTTGTCTTTTCGAGA
TAACCTCGCTAAACTACTTGAGTTTGGTCACTTTGAGAGCTCCGGTCTAATGGGAAGTTG
GTCTTTTCAGCTCGAGATTCAACGAAATCCAAATCCTCTCTATGTTCTTCTCTTTGTCGT
AGAAGAGCCCATCGAAGCCTCTCTCAATCTCCGTTGCAACCATTGCCAATATGTTGGTTG
GGGAAATCAAATGATATGCAACAAGAAGTACCATTTCGTGATCCCCTCAAAGGAAACAAT
GGCGGCTTTTTTAAAACTGGAAGGTGGAGGCTACGCTTTTCCCGAAAAGGAAAGTTTCTC
CCATCTTGTGGAGCTTCAAGGCCATGTCCTTCACGGCTTCTTTCACTCCAACGGATTTGG
TCACTTGCTCTCTCTCAACGGCATTGAAACCGGCTCCGACTTAACCGGTCATCAGGTCAT
GGATTTGTGGGACCGGCTCTGCACCGGTTTAAAGGCCAGGAAAATAGGGTTGAATGACGC
GTCGCACAAAAAAGGAATGGAGTTGAGGCTGCTGCATGGGGTAGCAAAAGGAGAGCCATG
GTTCGGTCGTTGGGGCTACCGGTTCGGGTCAGGGACATACGGAGTGACTCAAAAGATTTA
CGAGAAGGCACTTGAGTCGGTCCGTAACATACCCTTGTGCTTGCTTAACCATCACCTAAC
CAGCCTTAACCGAGAAACTCCAATCCTCTTGTCAAAGTACCAAAGTTTATCCACCGAGCC
ATTGATCACTCTCAGTGACCTCTTCAGGTTCATGCTTCATCTCCATTCACGTCTTCCAAG
AGATAACTACATGAGTAACTCCCGAAACCAAATCATCTCCATTGATAGTACCAACTGCAG
ATGGTCTCAAAAACGGATCCAAATGGCTATCAAAGTGGTCATAGAGTCACTGAAAAGAGT
CGAATACCGATGGATATCGAGACAAGAAGTGAGGGATGCAGCTAGAAATTACATTGGGGA
CACTGGTTTGCTTGATTTTGTGTTGAAGTCGCTTGGGAACCAGGTGGTTGGAAACTATTT
GGTCCGACGTAGTCTAAATCCGGTGAAGAAAGTGCTAGAGTATTCCTTGGAGGATATATC
AAATTTGTTACCAAGTAGTAACAATGAACTCATAACCCTTCAAAACCAAAACTCAATGGG
GAAGATGGCGACAAACGGTCACAATAAGATCACAAGAGGTCAAGTTATGAAAGACATGTT
TTATTTTTACAAACACATTCTCATGGACTACAAGGGAGTGTTAGGCCCCATAGGAGGTAT
ATTGAACCAAATCGGAATGGCTTCAAGAGCAATCCTCGACGCTAAGTACTTCATCAAAGA
GTATCACTACATTAGAGATACATCGGCGAAAACGTTACACTTAGATCGAGGGGAAGAATT
AGGAATATTCTGCACGATCGCGTGGAAATGTCATCATCATAACAACGAGATAAAAGTTCC
TCCACAAGAATGCATTGTAGTGAAGAAAGATGCAACATTGAGTGAAGTGTACGGAGAGGC
AGAAAGAGTGTTTAGAGATATCTATTGGGAACTAAGAGACGTCGTGGTGGAGTCAGTGGT
GGGTGGTCAAATAGAGATCACAAGGGTCGATGAAATGGCCTTGAATGGGAATAAGGGATT
GGTGTTAGAAGGGAACGTAGGAATGATGATGAACATTGAAGTGACGAAATGTTATGAAGA
TGATGATAAAAAGAAGGATAAGAGAATAGAGTGTGAGTGTGGAGCAACGGAAGAAGATGG
AGAGAGAATGGTGTGTTGTGATATTTGTGAAGTATGGCAACACACAAGGTGTGTTGGTGT
TCAACACAATGAGGAAGTGCCTCGCATTTTTCTTTGTCAAAGTTGTGATCAACATCTTAT
TCCTCTCTCTTTTTTACCCTAAATCATTCATGTTATATTAAACCTTCTTTTTTTCTATCA
TTACGTCATAATACATAAATTATACTCCTCGATC