Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G21130.1
CDS Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr5:7185968-7186813 FORWARD LENGTH=846 | 201606
Sequence

ATGACGGTCGAGAAACCACAAGAAATGACCGGCGATACAAACTCCGACGGATTCCTAACT
AACAAAGACGTTCACAGAATAAAGCATCCATCGCTAGATACCAACGATAGTTCCTCCAGC
CGATACTCCGTCGATTCTCAGAAATCAAGAATAGGACCACCGCCTGGGACTTACGTCATC
AAACTCCCTAAGGATCAGATCTACCGTGTTCCTCCACCGGAAAATGCTCACCGTTACGAG
TATCTCTCTCGCCGGAAAACAAACAAATCGTGTTGCCGGCGATGTTTATGCTATTCCCTC
TCTGCTTTACTCATCATTATCGTCCTCGCAGCGATTGCCTTCGGATTCTTCTACCTCGTT
TACCAGCCGCATAAGCCACAGTTCTCCGTGAGTGGAGTCTCCGTCACCGGAATCAACCTG
ACGTCATCTTCTCCGTTTTCTCCGGTGATCAGAATCAAGTTGCGATCTCAGAACGTTAAA
GGTAAACTCGGTTTGATATACGAGAAAGGAAATGAGGCTGACGTGTTTTTTAACGGAACC
AAACTTGGGAACGGCGAGTTCACGGCGTTTAAGCAGCCGGCGGGTAATGTAACGGTGATC
GTGACGGTGTTAAAGGGATCGAGTGTTAAGTTAAAGAGCTCGTCGCGTAAAGAGTTAACG
GAATCGCAGAAGAAAGGAAAAGTGCCGTTTGGTCTCAGAATTAAAGCGCCGGTTAAGTTT
AAGGTTGGCTCCGTTACAACGTGGACGATGACCATTACGGTGGATTGCAAAATAACAGTG
GATAAGTTAACGGCGTCAGCAACTGTGAAGACGGAAAATTGCGAAACGGGCTTGAGCCTG
TTGTAA

Peptide Sequence

PEP ID

AT5G21130.1
PEP Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr5:7185968-7186813 FORWARD LENGTH=281 | 201606
Sequence

MTVEKPQEMTGDTNSDGFLTNKDVHRIKHPSLDTNDSSSSRYSVDSQKSRIGPPPGTYVI
KLPKDQIYRVPPPENAHRYEYLSRRKTNKSCCRRCLCYSLSALLIIIVLAAIAFGFFYLV
YQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGT
KLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKF
KVGSVTTWTMTITVDCKITVDKLTASATVKTENCETGLSLL

Transcript Sequence

Transcript ID

AT5G21130.1
Transcript Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr5:7185897-7186919 FORWARD LENGTH=1023 | 201606
Sequence

CAAATCCTTACTGTCACCAAATCAAAACCTTCATTTCATCTGCTTCGCATTATTTCTCTG
ATTCAAGAAAAATGACGGTCGAGAAACCACAAGAAATGACCGGCGATACAAACTCCGACG
GATTCCTAACTAACAAAGACGTTCACAGAATAAAGCATCCATCGCTAGATACCAACGATA
GTTCCTCCAGCCGATACTCCGTCGATTCTCAGAAATCAAGAATAGGACCACCGCCTGGGA
CTTACGTCATCAAACTCCCTAAGGATCAGATCTACCGTGTTCCTCCACCGGAAAATGCTC
ACCGTTACGAGTATCTCTCTCGCCGGAAAACAAACAAATCGTGTTGCCGGCGATGTTTAT
GCTATTCCCTCTCTGCTTTACTCATCATTATCGTCCTCGCAGCGATTGCCTTCGGATTCT
TCTACCTCGTTTACCAGCCGCATAAGCCACAGTTCTCCGTGAGTGGAGTCTCCGTCACCG
GAATCAACCTGACGTCATCTTCTCCGTTTTCTCCGGTGATCAGAATCAAGTTGCGATCTC
AGAACGTTAAAGGTAAACTCGGTTTGATATACGAGAAAGGAAATGAGGCTGACGTGTTTT
TTAACGGAACCAAACTTGGGAACGGCGAGTTCACGGCGTTTAAGCAGCCGGCGGGTAATG
TAACGGTGATCGTGACGGTGTTAAAGGGATCGAGTGTTAAGTTAAAGAGCTCGTCGCGTA
AAGAGTTAACGGAATCGCAGAAGAAAGGAAAAGTGCCGTTTGGTCTCAGAATTAAAGCGC
CGGTTAAGTTTAAGGTTGGCTCCGTTACAACGTGGACGATGACCATTACGGTGGATTGCA
AAATAACAGTGGATAAGTTAACGGCGTCAGCAACTGTGAAGACGGAAAATTGCGAAACGG
GCTTGAGCCTGTTGTAAAATTTGAGCTAGTTTTGTTTATGCCTTGATGGGCTTTGTTCGA
ATTATGTTATTTTTAGTTTGTTTGATTCAATATATATTTTTGAATTAAAATTGAAATTTG
CTC