Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G20885.1
CDS Infomation

| RING/U-box superfamily protein | Chr5:7084133-7084663 REVERSE LENGTH=531 | 201606
Sequence

ATGAGCTTCTTCATCGAAGATTCTGGTCTCATAGTCACTCAGCTTCTCTACAAAATGGCT
GTTCTCATCACCGTCTTGAGATGGATCCTCGCTTGGATCTTACGCTACCGATCCAGATCC
AGATCCACCTCTTCTTCCACTTCCGCCTGTCCTTCGATTTCCTCACAGGCGATCAAAGAA
AGCCTCTCCGTGACGACGTTCCGTGACGCAGCTGAGAGATCTCCGGCGATGATCAACGAC
ACCTGCGCTGTGTGTCTCGGAGATCTGGAAGATGGAGATGAGGTTAGAGAACTCAGGAAC
TGTAGCCATATGTTTCACCGTGAGTGTATTGACCGGTGGTTGGATTATGAATGTTGCGGT
GGTGATGAGAATAACGAAGGTGAGGAGGATAATCACCGTACGTGTCCTCTTTGTAGAACT
CCGCTACTTGCTGCTAATACGACGTCGTGTGGTGATTGGCCGACGAAGAACGAACCTAGC
TGGGCCGTTGAACGGCTTCTCTACCTCTTCGGAGATGATCTTCACGTCTGA

Peptide Sequence

PEP ID

AT5G20885.1
PEP Infomation

| RING/U-box superfamily protein | Chr5:7084133-7084663 REVERSE LENGTH=176 | 201606
Sequence

MSFFIEDSGLIVTQLLYKMAVLITVLRWILAWILRYRSRSRSTSSSTSACPSISSQAIKE
SLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCG
GDENNEGEEDNHRTCPLCRTPLLAANTTSCGDWPTKNEPSWAVERLLYLFGDDLHV

Transcript Sequence

Transcript ID

AT5G20885.1
Transcript Infomation

| RING/U-box superfamily protein | Chr5:7083408-7084859 REVERSE LENGTH=1452 | 201606
Sequence

CTAAAATGAAAATAGTAGAAAAATTTAAAGGCTCCACTAATAAAGATAAAGCAAAGCATC
ATCATTCATCAGCAACAAGCAGCTTTATTCCTCTATTAAAAACGAATCTCATTCTCCACT
TTCTCCTCCCCTTCTCTCTCTCTCTCTCTCTCTCACACACACACACAAACGCACATACTT
GAGCAAAGTCATCACAATGAGCTTCTTCATCGAAGATTCTGGTCTCATAGTCACTCAGCT
TCTCTACAAAATGGCTGTTCTCATCACCGTCTTGAGATGGATCCTCGCTTGGATCTTACG
CTACCGATCCAGATCCAGATCCACCTCTTCTTCCACTTCCGCCTGTCCTTCGATTTCCTC
ACAGGCGATCAAAGAAAGCCTCTCCGTGACGACGTTCCGTGACGCAGCTGAGAGATCTCC
GGCGATGATCAACGACACCTGCGCTGTGTGTCTCGGAGATCTGGAAGATGGAGATGAGGT
TAGAGAACTCAGGAACTGTAGCCATATGTTTCACCGTGAGTGTATTGACCGGTGGTTGGA
TTATGAATGTTGCGGTGGTGATGAGAATAACGAAGGTGAGGAGGATAATCACCGTACGTG
TCCTCTTTGTAGAACTCCGCTACTTGCTGCTAATACGACGTCGTGTGGTGATTGGCCGAC
GAAGAACGAACCTAGCTGGGCCGTTGAACGGCTTCTCTACCTCTTCGGAGATGATCTTCA
CGTCTGATTTCATTTTTTTTTGTCTTTTCCGATTTTTATTTGATTTTTTATTTAGTGGGA
TCGATTTTGATCAATTAGAAATTTAAGTAGTGAGAGTGGTTAATTTTTGTAAATTGGGGG
ATTTAATGTGTTAGATTAGGAAATATAATAATAATATCATCGATTAATTTCAAACCATCA
GATTTCTGGTCGATCGTCAGCAAATGTTACATTCACATACCTATGGGGGGTAATCAATCT
TTCTAATACGAATCTCTAATCAAATTTGCATTGATAAAACCTTTCTATTTTTAACAAAGT
CACTATTTTTAACCATCTTAACTAGATTTGTGGGATTGTAACAAAGTGAGAATAATACAT
ACCAAACTCCTTAATTTCCCAAATACAAATGTTTTCTGGTTGGTGGTGAAGTGTTGATAC
TTTGATCAACCATACCATCTTAAAGTTGTAAAATCCAGCCGACACCACTAGGTTCATTCT
CAGTTTCTCATGAGCCTTATCATGAACCATCAACCTACTACTACAAGTGAAAGTATGATG
GTTAGGTTAATTCTCAGTTTCTCACCCTCTTCCGGCCGCATGTCTACCTCGAACCAAGCC
TCACTCTCCTTGGACGCAATTTTAGCAATATACACAACAAAGATTTCTTAGTGTTTAGTC
TACTCAAATCCTTGCCACTAATTTAGTCTACTCATATTAAAGGTTTAGTCTTTTGTGAGT
GACATCCTTGTT