Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G19660.1
CDS Infomation	\| SITE-1 protease \| Chr5:6642118-6646418 REVERSE LENGTH=3117 \| 201606
Sequence	ATGAAGGTGCTCGGAGAAGCTTCTTCATATCCTTACAGATCCTGTATCATCGTCGTATTT CTCTCCGTTTCTCTCTTCTGGCTCCGTCCCAGCACTTACCATCCCCAGCAACAAAATCTC AATCCAGAGAACGTAACTCGTTTGGAGTCTGAGAATGAAACGAAGACTAACTATATAATC CGATTTAAGCAGTATAAGCCGGCGAAAGATCATCGAATTTACCTCGAATCGAAGGTCCGA TCCGGTGGTTGGGGTTGGATCGAGAGGATTAACCCGGCGACGAAGTATCCGACTGACTTC GGTGTTCTATGGATCGAGGAAAGCGGGAAAGAGGCCGTGGTTGGAGAGATTGAGAGGCTG GAGATGGTGAAAGACGTGAACGTTGAGTTTAAGTACCAGAGAGTTTTGCTTGGAGGATCT TTTCCCGACGGGAAGAAACGTCCGGGGAAGATCTTCACTTCTATGTCTTTCGAAGAAGGA ACTGAGTCCTCTCCTATGGCCGATACAAGTAACACCACGTTAAACTGGAGTCGACATCTT CTCGCTCAGAAGACTCAAGTCACGTCCATGTTTGGAGCAGATCATCTCTGGAAGAAGGGT TACACCGGCGCTAAAGTTAAAATGGCTATATTTGATACTGGAATAAGAGCTGATCACCCT CATTTTCGTAAGATCAAGGAGCGTACGAATTGGACAAATGAGGACACTTTGAATGACAAC CTGGGTCATGGGACGTTTGTTGCTGGTGTTATTGCTGGTCGAAATCCAGAATGTCTTGGT TTTGCCTCAGACACGGAAATCTATGCTTTTCGAGTGTTCACAGATGCCCAGGTATCATAC ACCTCATGGTTTCTTGATGCTTTCAATTATGCTATAGCAACAGATATGGATGTATTAAAT TTGAGCATTGGGGGACCGGATTACTTGGATCTGCCTTTTGTAGAGAAGGTTTGGGAAATA ACAGCCAGCAATATCATTATGGTGTCTGCAATTGGAAATGATGGGCCACTTTACGGAACG TTAAATAATCCAGCTGACCAGAGTGATGTAATAGGTGTCGGAGGTATTGACAATGATGAT CACATAGCTTCATTCTCATCTCGTGGCATGAGCACCTGGGAACTTCCTCATGGATATGGC CGTGTGAAACCAGATGTGGTTGCATATGGCCGCGACATTATGGGGTCCAAGATCAGCACT GGTTGTAAAAGCCTGTCTGGAACAAGTGTGGCTAGTCCTGTTGTTGCTGGTATTGTTTGC CTACTTGTAAGTGTTATTCCTGAAGCTAGAAGGAAGGATCTGCTCAATCCAGCAAGCATG AAGCAGGCATTGGTCGAAGGTGCTGCTAAGCTTTCAGGTCCTAATATGTATGAACAGGGT GCTGGAAGAGTTGATCTATTAGAATCATATGAAATTCTAAAGAGCTACCACCCCCGGGCA AGCATTTTCCCGAGCATTCTTGATTATAATGATTGTCCATATTCCTGGCCCTTTTGTCGT CAGCCGCTATATGCCGGGGCTATGCCCATCATTTTCAACACGACAATTCTTAATGGTATG GGTGTCATTGGCTATATTGAAAGTCCACCAACATGGCACCCTGCAAACGAGGAAGGAAAT CTTCTGAGCATTCACTTTAAGTACCCGGATGTTATATGGCCGTGGACTGGTTATCTAGCT CTACACATGCAGATCAAGGAAGAAGGTGCACAGTTCACAGGTGAAATAGAGGGTAATGTA ACTGTGAAAGTCTATAGCCCACCAGCCTCTGGAGAAAGTGGGCCTAGAAGGAGTACTTGT TCTCTTCAGTTGAAACTGAAAGTGATTCCCACTCCACCACGAGCGAAACGTATTTTGTGG GATCAATTTCACAGCATTAAATATCCTCCTGGTTATATTCCAAGAGACTCTTTGGATGTC CGCAATGACATACTTGATTGGCATGGTGATCACCTGCATACAAACTTTCACATCATGTAC AACATGTTACGTGATGCTGGGTACTATATCGAGACTCTTGGTTCGCCCCTTACATGTTTT GATGCTCAGCAATATGGAACCCTTTTGATGGTTGACCTTGAAGATGATTACTTTCCAGAA GAAATTGAAAAACTCAGAGATGACGTTATCAATACTGGACTGGGTCTGGTTGTGTTTGCT GAGTGGTATAATGTCGATACCATGGTGAAGATGAGATTCTTCGATGATAACACACGCAGT TGGTGGACTCCAGTCACTGGAGGTGCAAATATCCCAGCACTTAATAACCTTCTTGCATCA TTTGGGATTGCGTTTGGGGACAAAATTCTGAATGGGGATTTCAGTATTGACGGTGAGCAG AGTCGATATGCTTCTGGAACAAACATAGTCCGGTTTCCTGCTGGTGGGTTTTTGCACACT TTTCCTTTATTAGACAGCTCTGAGAGTGGCGCTACCCAAAATCTACTGCTAACTGAGGCA TCAAAGGAAGACCCTGCTGTTCTTGGGCTTTTGGAGATTGGTGAAGGTCGGGTTGGTGTA TATGGAGACTCAAATTGTTTGGATAGTAGCCACATGGTCACCAACTGCTACTGGCTCCTG AAGAAAATGCTAGATTTTAGCAGTTCAAATATCAAAGACCCTGTACTTTTCTCAAAATTT GCTAAGAGATATTCACCAGTAATCATAGACGAGAAGCAACTGCCATCCCGAAGAACTGAT GTAAATTTTTCAACATACTCTTCTGTGATCGGAAAGGAGCTAATCTGTGAGAGTGACTCC AGATTTGAAGTATGGGGGACTAAAGGATATAACTTACATGTCAGAGGAAGGAATCGTAGA TTACCCGGTTATCATGGCATTGATTTGGGTAGAGGCTTGAATTTCACAGTGGAGAGTAAA AGACCAACGCGTTGGAGATCAGCCAAGGAAGGAGGTGAGCTTAGTTCTTCCAGGAGCAAG TCTCTGGGAGGCCTTTTCAATAGAGACGAGATTGACATGCCATTTCTTGTTCCTACTCGC TGGATCGTACTTGCTGGTGTTGTAGCTAGTGGAGTTCTAGTGCTACTAAGCATATGGAGA ATCAGGCAGAAGAGGGGTAGGCGGAGAAGAGCATCAGGGTCGAATCGATTAGCCTAG

Peptide Sequence

PEP ID	AT5G19660.1
PEP Infomation	\| SITE-1 protease \| Chr5:6642118-6646418 REVERSE LENGTH=1038 \| 201606
Sequence	MKVLGEASSYPYRSCIIVVFLSVSLFWLRPSTYHPQQQNLNPENVTRLESENETKTNYII RFKQYKPAKDHRIYLESKVRSGGWGWIERINPATKYPTDFGVLWIEESGKEAVVGEIERL EMVKDVNVEFKYQRVLLGGSFPDGKKRPGKIFTSMSFEEGTESSPMADTSNTTLNWSRHL LAQKTQVTSMFGADHLWKKGYTGAKVKMAIFDTGIRADHPHFRKIKERTNWTNEDTLNDN LGHGTFVAGVIAGRNPECLGFASDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLN LSIGGPDYLDLPFVEKVWEITASNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDNDD HIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISTGCKSLSGTSVASPVVAGIVC LLVSVIPEARRKDLLNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYEILKSYHPRA SIFPSILDYNDCPYSWPFCRQPLYAGAMPIIFNTTILNGMGVIGYIESPPTWHPANEEGN LLSIHFKYPDVIWPWTGYLALHMQIKEEGAQFTGEIEGNVTVKVYSPPASGESGPRRSTC SLQLKLKVIPTPPRAKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMY NMLRDAGYYIETLGSPLTCFDAQQYGTLLMVDLEDDYFPEEIEKLRDDVINTGLGLVVFA EWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNNLLASFGIAFGDKILNGDFSIDGEQ SRYASGTNIVRFPAGGFLHTFPLLDSSESGATQNLLLTEASKEDPAVLGLLEIGEGRVGV YGDSNCLDSSHMVTNCYWLLKKMLDFSSSNIKDPVLFSKFAKRYSPVIIDEKQLPSRRTD VNFSTYSSVIGKELICESDSRFEVWGTKGYNLHVRGRNRRLPGYHGIDLGRGLNFTVESK RPTRWRSAKEGGELSSSRSKSLGGLFNRDEIDMPFLVPTRWIVLAGVVASGVLVLLSIWR IRQKRGRRRRASGSNRLA

Transcript Sequence

Transcript ID	AT5G19660.1
Transcript Infomation	\| SITE-1 protease \| Chr5:6641907-6646546 REVERSE LENGTH=3456 \| 201606
Sequence	CATCAGAGTATGTTCATCAGAGGTCAGAAAATCAAATTAGTTACATAGGAGTGAAGCAAA TTTCCCCCGGCGACGACATGGACGTATGTGAATGAATCTCGCTATCAAACCCTAATTCAA CCATCGCCATGAAGGTGCTCGGAGAAGCTTCTTCATATCCTTACAGATCCTGTATCATCG TCGTATTTCTCTCCGTTTCTCTCTTCTGGCTCCGTCCCAGCACTTACCATCCCCAGCAAC AAAATCTCAATCCAGAGAACGTAACTCGTTTGGAGTCTGAGAATGAAACGAAGACTAACT ATATAATCCGATTTAAGCAGTATAAGCCGGCGAAAGATCATCGAATTTACCTCGAATCGA AGGTCCGATCCGGTGGTTGGGGTTGGATCGAGAGGATTAACCCGGCGACGAAGTATCCGA CTGACTTCGGTGTTCTATGGATCGAGGAAAGCGGGAAAGAGGCCGTGGTTGGAGAGATTG AGAGGCTGGAGATGGTGAAAGACGTGAACGTTGAGTTTAAGTACCAGAGAGTTTTGCTTG GAGGATCTTTTCCCGACGGGAAGAAACGTCCGGGGAAGATCTTCACTTCTATGTCTTTCG AAGAAGGAACTGAGTCCTCTCCTATGGCCGATACAAGTAACACCACGTTAAACTGGAGTC GACATCTTCTCGCTCAGAAGACTCAAGTCACGTCCATGTTTGGAGCAGATCATCTCTGGA AGAAGGGTTACACCGGCGCTAAAGTTAAAATGGCTATATTTGATACTGGAATAAGAGCTG ATCACCCTCATTTTCGTAAGATCAAGGAGCGTACGAATTGGACAAATGAGGACACTTTGA ATGACAACCTGGGTCATGGGACGTTTGTTGCTGGTGTTATTGCTGGTCGAAATCCAGAAT GTCTTGGTTTTGCCTCAGACACGGAAATCTATGCTTTTCGAGTGTTCACAGATGCCCAGG TATCATACACCTCATGGTTTCTTGATGCTTTCAATTATGCTATAGCAACAGATATGGATG TATTAAATTTGAGCATTGGGGGACCGGATTACTTGGATCTGCCTTTTGTAGAGAAGGTTT GGGAAATAACAGCCAGCAATATCATTATGGTGTCTGCAATTGGAAATGATGGGCCACTTT ACGGAACGTTAAATAATCCAGCTGACCAGAGTGATGTAATAGGTGTCGGAGGTATTGACA ATGATGATCACATAGCTTCATTCTCATCTCGTGGCATGAGCACCTGGGAACTTCCTCATG GATATGGCCGTGTGAAACCAGATGTGGTTGCATATGGCCGCGACATTATGGGGTCCAAGA TCAGCACTGGTTGTAAAAGCCTGTCTGGAACAAGTGTGGCTAGTCCTGTTGTTGCTGGTA TTGTTTGCCTACTTGTAAGTGTTATTCCTGAAGCTAGAAGGAAGGATCTGCTCAATCCAG CAAGCATGAAGCAGGCATTGGTCGAAGGTGCTGCTAAGCTTTCAGGTCCTAATATGTATG AACAGGGTGCTGGAAGAGTTGATCTATTAGAATCATATGAAATTCTAAAGAGCTACCACC CCCGGGCAAGCATTTTCCCGAGCATTCTTGATTATAATGATTGTCCATATTCCTGGCCCT TTTGTCGTCAGCCGCTATATGCCGGGGCTATGCCCATCATTTTCAACACGACAATTCTTA ATGGTATGGGTGTCATTGGCTATATTGAAAGTCCACCAACATGGCACCCTGCAAACGAGG AAGGAAATCTTCTGAGCATTCACTTTAAGTACCCGGATGTTATATGGCCGTGGACTGGTT ATCTAGCTCTACACATGCAGATCAAGGAAGAAGGTGCACAGTTCACAGGTGAAATAGAGG GTAATGTAACTGTGAAAGTCTATAGCCCACCAGCCTCTGGAGAAAGTGGGCCTAGAAGGA GTACTTGTTCTCTTCAGTTGAAACTGAAAGTGATTCCCACTCCACCACGAGCGAAACGTA TTTTGTGGGATCAATTTCACAGCATTAAATATCCTCCTGGTTATATTCCAAGAGACTCTT TGGATGTCCGCAATGACATACTTGATTGGCATGGTGATCACCTGCATACAAACTTTCACA TCATGTACAACATGTTACGTGATGCTGGGTACTATATCGAGACTCTTGGTTCGCCCCTTA CATGTTTTGATGCTCAGCAATATGGAACCCTTTTGATGGTTGACCTTGAAGATGATTACT TTCCAGAAGAAATTGAAAAACTCAGAGATGACGTTATCAATACTGGACTGGGTCTGGTTG TGTTTGCTGAGTGGTATAATGTCGATACCATGGTGAAGATGAGATTCTTCGATGATAACA CACGCAGTTGGTGGACTCCAGTCACTGGAGGTGCAAATATCCCAGCACTTAATAACCTTC TTGCATCATTTGGGATTGCGTTTGGGGACAAAATTCTGAATGGGGATTTCAGTATTGACG GTGAGCAGAGTCGATATGCTTCTGGAACAAACATAGTCCGGTTTCCTGCTGGTGGGTTTT TGCACACTTTTCCTTTATTAGACAGCTCTGAGAGTGGCGCTACCCAAAATCTACTGCTAA CTGAGGCATCAAAGGAAGACCCTGCTGTTCTTGGGCTTTTGGAGATTGGTGAAGGTCGGG TTGGTGTATATGGAGACTCAAATTGTTTGGATAGTAGCCACATGGTCACCAACTGCTACT GGCTCCTGAAGAAAATGCTAGATTTTAGCAGTTCAAATATCAAAGACCCTGTACTTTTCT CAAAATTTGCTAAGAGATATTCACCAGTAATCATAGACGAGAAGCAACTGCCATCCCGAA GAACTGATGTAAATTTTTCAACATACTCTTCTGTGATCGGAAAGGAGCTAATCTGTGAGA GTGACTCCAGATTTGAAGTATGGGGGACTAAAGGATATAACTTACATGTCAGAGGAAGGA ATCGTAGATTACCCGGTTATCATGGCATTGATTTGGGTAGAGGCTTGAATTTCACAGTGG AGAGTAAAAGACCAACGCGTTGGAGATCAGCCAAGGAAGGAGGTGAGCTTAGTTCTTCCA GGAGCAAGTCTCTGGGAGGCCTTTTCAATAGAGACGAGATTGACATGCCATTTCTTGTTC CTACTCGCTGGATCGTACTTGCTGGTGTTGTAGCTAGTGGAGTTCTAGTGCTACTAAGCA TATGGAGAATCAGGCAGAAGAGGGGTAGGCGGAGAAGAGCATCAGGGTCGAATCGATTAG CCTAGCATATAGCCGTGTCTGGGGTCCAGTCTTTTTTCTACTGTCATTTACACTGACCAC AGAATGTAGTCTCACTTTTACTTGGAAAACTGGCAATTTTGTTTTAGGTAAATCATTTTT AAAATCATCATTCAAAGAGCTAAAATATGTAGGAAGAAATACTAATTTCTAAAAACATTA GCCTCCACTAAAAAAAACAATTTTATTTGAAATGTA