Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G18820.1
CDS Infomation

| TCP-1/cpn60 chaperonin family protein | Chr5:6271549-6274153 FORWARD LENGTH=1728 | 201606
Sequence

ATGTTCGCCGTATCACCGTCGTCATTCTCGCCGACAACCATTTCTCCGCGCCGTAGTGGA
CAGAGGAACGAACCTCGAAAATTCTCGGTGGTGAGAGCTGGAGCTAAGAGAATACTATAC
GGTAAAGATAGCAGAGAGAAACTCCAAGCCGGAATCGATAAGTTAGCTGATGCTGTTTCC
ATCACCTTAGGCCCTAGAGGGCGTAATGTAGTGCTTGCTGAAAAAGATACAATCAAAGTG
ATTAACGATGGTGTCACCATTGCTAAATCTATTGAGCTTCCTGACACTATTGAGAACGCT
GGAGCAACATTAATCCAAGAGGTTGCGATTAAAATGAACGAATCAGCGGGTGACGGGACA
ACCACTGCAATCATTTTGGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTT
GGAGCTAATGCTGTTTCTGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGG
GTGTTGCAGATGAAAAGTATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCA
ATCTCTGCTGGTAACGATGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATT
GGCCCTGATGGTGTCATCTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTT
GAGGAAGGAATGAAGTTTGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAG
AAATCTACGGTGGAATTCGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCA
GCCAAAGAATTAGTTCCGTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATA
ATTGCAGAAGATATCTCTGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGT
TTGATCAATGTCGCAGTTGTGAAATGTCCAGGAATGTTGGATGGGAAAAAGGCTTTGCTA
CAAGACATTGCACTCATGACAGGAGCTGATTATCTTTCCGGAGATTTAGGCATGTCGCTC
ATGGGTGCAACTTCAGATCAGCTGGGTGTTTCTCGTAGAGTAGTAATTACAGCTAATTCA
ACAACTATAGTCGCAGACGCTTCTACTAAACCAGAGATTCAGGCAAGAATTGCTCAGATG
AAGAAGGATCTAGCTGAGACAGATAATTCATATCTTTCAAAAAAAATAGCAGAGAGAATT
GCTAAGCTCACAGGAGGCGTGGCTGTAATAAAGGTTGGAGGCCACACTGAAACAGAACTT
GAGGACAGAAAACTAAGAATAGAGGACGCGAAGAATGCTACATTTGCAGCCATGAGAGAA
GGTATAGTTCCAGGTGGTGGTGCTACTTATATCCATCTTTTAGATGAGATACCGAGAATC
AAGAAGAATCTAATGGAAGATTCATACGAACAAATAGGTGCAGATATTGTAGCAATGGCA
CTCACTGCACCTGCAATGGCCATAGCAACCAATGCTGGGGTTGATGGATCAGTTGTGGTG
CAGAAAACCAGAGAACTCGAATGGAGAAGTGGTTACAACGCAATGTCTGGAAAGTATGAG
GATCTTCTAAACGCTGGAATCGCAGATCCTTGTCGGGTTTCAAGATTCGCCCTTCAAAAC
GCAGTTTCCGTTGCCGGCATTATTCTCACAACTCAAGCAGTACTCGTGGAGAAGATCAAG
CAACCTAAACCTGCTGTTCCTCAAGTTCCTGGCATACCCACATCATAA

Peptide Sequence

PEP ID

AT5G18820.1
PEP Infomation

| TCP-1/cpn60 chaperonin family protein | Chr5:6271549-6274153 FORWARD LENGTH=575 | 201606
Sequence

MFAVSPSSFSPTTISPRRSGQRNEPRKFSVVRAGAKRILYGKDSREKLQAGIDKLADAVS
ITLGPRGRNVVLAEKDTIKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMNESAGDGT
TTAIILAREMIKAGSLAIAFGANAVSVKNGMNKTVKELVRVLQMKSIPVQGKNDIKAVAS
ISAGNDEFVGNLIAETVEKIGPDGVISIESSSTSETSVIVEEGMKFDKGYMSPHFITNQE
KSTVEFDKAKILVTDQKITSAKELVPLLEKTSQLSVPLLIIAEDISAEVLEILVVNKKQG
LINVAVVKCPGMLDGKKALLQDIALMTGADYLSGDLGMSLMGATSDQLGVSRRVVITANS
TTIVADASTKPEIQARIAQMKKDLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETEL
EDRKLRIEDAKNATFAAMREGIVPGGGATYIHLLDEIPRIKKNLMEDSYEQIGADIVAMA
LTAPAMAIATNAGVDGSVVVQKTRELEWRSGYNAMSGKYEDLLNAGIADPCRVSRFALQN
AVSVAGIILTTQAVLVEKIKQPKPAVPQVPGIPTS

Transcript Sequence

Transcript ID

AT5G18820.1
Transcript Infomation

| TCP-1/cpn60 chaperonin family protein | Chr5:6271386-6274599 FORWARD LENGTH=2337 | 201606
Sequence

TGGGCTTATATAAATCAAAGCTTTAAAGGCTTTGTGTCAAAGTTGTTGACAAAAAAAAAG
AAAAAACTCGTACCTTGACTCGTCCGGTTCCAAAAACTCGGTCACCCAAAAATAAAAATC
AAAACCCTTCGATAAACCTCCCGGAGGAGAGGAGACACCCGAAATGTTCGCCGTATCACC
GTCGTCATTCTCGCCGACAACCATTTCTCCGCGCCGTAGTGGACAGAGGAACGAACCTCG
AAAATTCTCGGTGGTGAGAGCTGGAGCTAAGAGAATACTATACGGTAAAGATAGCAGAGA
GAAACTCCAAGCCGGAATCGATAAGTTAGCTGATGCTGTTTCCATCACCTTAGGCCCTAG
AGGGCGTAATGTAGTGCTTGCTGAAAAAGATACAATCAAAGTGATTAACGATGGTGTCAC
CATTGCTAAATCTATTGAGCTTCCTGACACTATTGAGAACGCTGGAGCAACATTAATCCA
AGAGGTTGCGATTAAAATGAACGAATCAGCGGGTGACGGGACAACCACTGCAATCATTTT
GGCTAGAGAAATGATCAAAGCTGGTTCTTTGGCTATTGCTTTTGGAGCTAATGCTGTTTC
TGTGAAGAATGGAATGAATAAGACTGTTAAAGAGTTGGTCAGGGTGTTGCAGATGAAAAG
TATTCCTGTTCAAGGGAAGAATGATATTAAAGCTGTGGCTTCAATCTCTGCTGGTAACGA
TGAATTTGTGGGGAATTTGATTGCTGAGACTGTGGAAAAGATTGGCCCTGATGGTGTCAT
CTCCATTGAATCATCTTCCACTTCAGAAACGTCTGTTATAGTTGAGGAAGGAATGAAGTT
TGACAAGGGCTATATGTCGCCTCATTTCATCACAAATCAGGAGAAATCTACGGTGGAATT
CGACAAAGCTAAAATTCTTGTGACGGATCAGAAAATCACTTCAGCCAAAGAATTAGTTCC
GTTACTGGAGAAAACCTCACAACTGAGTGTTCCGCTCCTTATAATTGCAGAAGATATCTC
TGCGGAAGTGCTTGAGATACTGGTGGTGAACAAGAAGCAAGGTTTGATCAATGTCGCAGT
TGTGAAATGTCCAGGAATGTTGGATGGGAAAAAGGCTTTGCTACAAGACATTGCACTCAT
GACAGGAGCTGATTATCTTTCCGGAGATTTAGGCATGTCGCTCATGGGTGCAACTTCAGA
TCAGCTGGGTGTTTCTCGTAGAGTAGTAATTACAGCTAATTCAACAACTATAGTCGCAGA
CGCTTCTACTAAACCAGAGATTCAGGCAAGAATTGCTCAGATGAAGAAGGATCTAGCTGA
GACAGATAATTCATATCTTTCAAAAAAAATAGCAGAGAGAATTGCTAAGCTCACAGGAGG
CGTGGCTGTAATAAAGGTTGGAGGCCACACTGAAACAGAACTTGAGGACAGAAAACTAAG
AATAGAGGACGCGAAGAATGCTACATTTGCAGCCATGAGAGAAGGTATAGTTCCAGGTGG
TGGTGCTACTTATATCCATCTTTTAGATGAGATACCGAGAATCAAGAAGAATCTAATGGA
AGATTCATACGAACAAATAGGTGCAGATATTGTAGCAATGGCACTCACTGCACCTGCAAT
GGCCATAGCAACCAATGCTGGGGTTGATGGATCAGTTGTGGTGCAGAAAACCAGAGAACT
CGAATGGAGAAGTGGTTACAACGCAATGTCTGGAAAGTATGAGGATCTTCTAAACGCTGG
AATCGCAGATCCTTGTCGGGTTTCAAGATTCGCCCTTCAAAACGCAGTTTCCGTTGCCGG
CATTATTCTCACAACTCAAGCAGTACTCGTGGAGAAGATCAAGCAACCTAAACCTGCTGT
TCCTCAAGTTCCTGGCATACCCACATCATAACCAACCACCACCAAAGGTAACAAAGAAGC
ACAAAAACCAAACTCTCTACTGCAGATTTTGTCAGAATCTAAACCTTTGCTCACAAAGTG
GTGTTTAATCTTGTTGTGTTTTAACTAAACATTAGAATCTGTGATGCAATGGTATGTGCA
GAGTGAAAGAAAAAAAAGATTGTTGGAATCATTGTTGCTTATTGTGTTAGCTAAGCTAGT
AGTTAGCCTCAAATTTCGGAGAAAGCAAGAAAATGCCTTGTAATGCAAGATTCTTACGCT
GTAAGCCCTAGTTGAATGTGTATACGGACATCTTTTATATTATTTTCTTTTGTCAGTTTT
GTGCTTAGAAAGCGTCATCAAGTCTCAATTATTATGCAATTTCATCTTATTAAACTTTTG
TAGCCTATGTGGTTATGTCGAGACGTATTTGGAGTAATTCAATACATTAAGAATAAG