Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G18540.1
CDS Infomation

| E3 ubiquitin-protein ligase | Chr5:6153924-6155877 FORWARD LENGTH=507 | 201606
Sequence

ATGGGAGGAGGAGCGATTGACGAGGAGCTGACAGAAGATGAGAAGAGAGCTCTCAGAGGA
AGCAAATTCGCTCCTCTTACTTCTCTTCCTTCGTCTTCTCGCTCTAAGCCTCCCAGATTG
GCTCATCCAGGTGGACCATTGAAGACGAATAAAGCGGCGGCTTTAGCCAAGTTTCTAGAG
AGGAAGCTGCAAGATCCTAATGGGTTAGCTTCCATTGATCCAGCTCTTGTCGAATTGGCC
GTCAAAAACGCCAAAGACACTGTTATTTCGAGTGGGGCCTCGAGTTCAGGAAGAAGAATT
CAACACGTTGCTTCATTCGAAGATGTCGAGGTATCTTCTGATGACGATAAGATAGAGAAC
ACTAAGCTTAACAAAAAGAAAAAGAAGAAAAACGCAAAGAAGAAAAAAGAAGAGAAAAAG
AAGAAGAAAAACAAAAAGCATAAGCAACAGATCACTGTCGATGAAGATGCCAAGTTAAAG
AGACCCAATAAGAAGTTGAAGCTTTAG

Peptide Sequence

PEP ID

AT5G18540.1
PEP Infomation

| E3 ubiquitin-protein ligase | Chr5:6153924-6155877 FORWARD LENGTH=168 | 201606
Sequence

MGGGAIDEELTEDEKRALRGSKFAPLTSLPSSSRSKPPRLAHPGGPLKTNKAAALAKFLE
RKLQDPNGLASIDPALVELAVKNAKDTVISSGASSSGRRIQHVASFEDVEVSSDDDKIEN
TKLNKKKKKKNAKKKKEEKKKKKNKKHKQQITVDEDAKLKRPNKKLKL

Transcript Sequence

Transcript ID

AT5G18540.1
Transcript Infomation

| E3 ubiquitin-protein ligase | Chr5:6153838-6156309 FORWARD LENGTH=1025 | 201606
Sequence

CATAAATATCTCTTATTTCAAAAAAAATATCAAGACGGCCGTCAAAGTTTCGGTGACGGA
GAATATTGTTGCCGACGGAAATTGGAATGGGAGGAGGAGCGATTGACGAGGAGCTGACAG
AAGATGAGAAGAGAGCTCTCAGAGGAAGCAAATTCGCTCCTCTTACTTCTCTTCCTTCGT
CTTCTCGCTCTAAGCCTCCCAGATTGGCTCATCCAGGTGGACCATTGAAGACGAATAAAG
CGGCGGCTTTAGCCAAGTTTCTAGAGAGGAAGCTGCAAGATCCTAATGGGTTAGCTTCCA
TTGATCCAGCTCTTGTCGAATTGGCCGTCAAAAACGCCAAAGACACTGTTATTTCGAGTG
GGGCCTCGAGTTCAGGAAGAAGAATTCAACACGTTGCTTCATTCGAAGATGTCGAGGTAT
CTTCTGATGACGATAAGATAGAGAACACTAAGCTTAACAAAAAGAAAAAGAAGAAAAACG
CAAAGAAGAAAAAAGAAGAGAAAAAGAAGAAGAAAAACAAAAAGCATAAGCAACAGATCA
CTGTCGATGAAGATGCCAAGTTAAAGAGACCCAATAAGAAGTTGAAGCTTTAGTTTCCTT
TTTTTCGCTACACATTACTGGTTACATATTTGATGAAGATGGTTTAGCTGGGTCTTTAGA
AGAACAAACTCAATCACTCTTATGTGTCTGAAAATGTCTGATCCAAAGAATCTGTTAGTC
CGATGGTTAGCCAAAGATTAGCATGATGATCTTTCTTCTTAATGTAGGTTAGATTTCTCC
GGCTCTATTTGGTTAAATCTGAGACCGGAGTTGATTGTAATTTTAGAACGAATAGCTTCA
TGGATCTGAAATTTGTATTTTGGTTAAAGAGCAAATGCTTGTGTTGTTAGTTATGAGACA
AGTTCCAATTAGTAATGATCTGCATAAGTTCATTGCAGGAACATTTAATCTAACAGAGCT
CATGGGTATAAGTGTTTGTACCACTTCAAAGGGACAAGAGGAAACACAATAATTTTAAAT
CAGGG