Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G17680.2
CDS Infomation	\| disease resistance protein (TIR-NBS-LRR class) \| Chr5:5822999-5827153 FORWARD LENGTH=3888 \| 201606
Sequence	ATGGCTTCTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCAACAGTGTGGAAAACGGACGTT TTCGTGAGTTTTAGAGGAGAAGATGTGCGTAAAACATTCGTGAGCCATCTATTCTGCGAG TTTGATCGGATGGGGATTAAAGCTTTCAGAGACGATTTGGATCTACAGAGAGGAAAATCC ATCTCCCCTGAGCTTATAGATGCGATCAAAGGCTCCAGATTTGCCATTGTTGTGGTCTCT AGGAACTACGCAGCTTCAAGCTGGTGCTTAGACGAGCTCTTGAAGATCATGGAATGTAAT AAAGATACGATTGTACCCATTTTCTACGAGGTTGATCCTTCGGATGTGAGAAGACAGAGA GGAAGTTTCGGTGAAGATGTTGAGAGTCACAGTGACAAGGAGAAAGTGGGGAAATGGAAA GAAGCTTTGAAGAAATTAGCTGCCATTTCTGGTGAAGATTCTCGGAATTGGAGGGATGAC TCAAAGCTGATTAAGAAGATTGTTAAAGACATTTCTGATAAATTGGTTTCTACTTCATGG GATGATTCAAAAGGTTTGATTGGAATGAGTTCTCATATGGACTTTCTGCAGTCTATGATA TCTATAGTGGACAAGGATGTTCGAATGTTGGGGATTTGGGGAATGGGTGGAGTTGGGAAA ACTACGATTGCCAAATACTTATACAATCAACTCTCAGGTCAATTTCAAGTTCATTGCTTC ATGGAGAATGTGAAGGAAGTCTGTAACAGATATGGAGTTAGGCGTTTACAAGTGGAGTTT TTATGCAGAATGTTTCAAGAGAGAGACAAAGAAGCGTGGAGTTCGGTTTCTTGTTGCAAT ATAATAAAGGAAAGGTTCAGGCACAAAATGGTTTTCATTGTTCTTGACGATGTAGATAGA TCTGAGCAACTGAATGAATTGGTGAAGGAGACTGGTTGGTTTGGTCCGGGAAGCAGAATC ATCGTGACAACACGGGATAGACATTTGCTACTTTCCCATGGAATAAATTTGGTGTATAAA GTGAAGTGTTTACCCAAAAAAGAAGCTCTCCAGCTCTTTTGTAATTATGCTTTCAGAGAA GAGATTATACTTCCACATGGGTTTGAGGAGTTATCGGTTCAAGCTGTTAACTATGCTTCT GGTCTTCCACTGGCTCTAAGAGTTTTAGGCTCCTTCCTTTATCGAAGAAGCCAAATTGAA TGGGAAAGTACTCTTGCTAGGCTTAAAACTTACCCTCATAGTGATATCATGGAAGTTTTG AGAGTTAGCTACGACGGATTGGATGAGCAAGAGAAGGCTATTTTTCTCTATATATCATGT TTTTATAACATGAAGCAGGTTGATTATGTCAGAAAACTTCTGGATCTTTGTGGCTATGCT GCTGAAATCGGAATAACGATACTTACCGAGAAGTCTTTGATAGTTGAATCAAATGGATGC GTAAAGATACATGATTTGCTTGAACAGATGGGTAGAGAGCTTGTTCGTCAACAAGCAGTT AACAACCCAGCCCAACGGTTACTATTATGGGATCCTGAAGACATATGTCATTTGCTGTCA GAAAATTCTGGAACACAACTTGTTGAAGGAATCTCTCTGAACCTCTCTGAAATTTCTGAG GTATTTGCTAGTGATCGAGCGTTCGAGGGATTGTCTAATCTCAAACTTCTCAACTTCTAT GATCTTTCGTTTGATGGAGAGACTAGAGTGCATCTACCTAATGGCCTCAGTTATCTCCCA CGCAAGCTTCGTTATCTCCGTTGGGATGGATACCCTTTAAAGACTATGCCTTCAAGATTT TTTCCTGAGTTTCTTGTTGAACTTTGTATGAGTAATAGCAATCTTGAAAAACTTTGGGAT GGGATCCAGCCTCTGAGGAACTTGAAGAAGATGGATCTTTCTCGCTGTAAATACCTTGTC GAAGTTCCAGACCTCTCAAAAGCCACAAATCTGGAGGAACTAAACCTTTCCTATTGCCAA AGCTTGGTTGAGGTTACTCCATCTATCAAGAACCTAAAGGGACTTTCTTGCTTCTACTTG ACTAATTGCATCCAACTCAAGGACATTCCGATTGGAATAATTTTGAAGTCGCTTGAAACA GTGGGAATGAGTGGATGCTCAAGCCTAAAGCATTTTCCAGAAATTTCTTGGAATACTAGA AGACTCTATCTGAGCAGTACAAAGATAGAGGAACTTCCATCATCAATCAGCCGTCTCTCT TGTCTGGTTAAATTGGATATGTCAGATTGTCAGAGACTCAGGACTCTTCCAAGCTATCTA GGGCACTTGGTCTCACTGAAATCCCTGAATTTGGACGGTTGCAGACGTCTTGAGAACCTC CCAGACACGTTACAGAATCTAACATCTCTTGAAACGCTTGAAGTGTCTGGTTGCCTTAAT GTCAACGAGTTCCCTCGTGTTTCCACGAGTATAGAAGTTCTGCGTATATCTGAGACATCA ATTGAAGAAATTCCTGCAAGGATCTGTAATCTCTCTCAGCTTAGGTCCTTGGATATCTCA GAAAACAAAAGACTTGCATCACTTCCGGTAAGCATTTCTGAGCTAAGATCACTTGAAAAG CTCAAGCTTTCTGGATGTTCTGTACTCGAGAGTTTTCCACTAGAAATTTGTCAGACAATG AGCTGCTTGAGGTGGTTTGATTTAGATAGGACTAGCATTAAAGAACTACCTGAAAACATT GGGAATTTAGTAGCTCTTGAGGTGCTTCAAGCCAGTAGAACAGTGATAAGGCGAGCACCA TGGTCTATTGCACGACTTACCCGTCTTCAAGTTTTAGCGATTGGGAATAGTTTCTTTACT CCAGAAGGTTTGTTGCATTCTCTTTGTCCTCCCTTATCAAGGTTTGATGACTTGAGAGCT CTGAGCCTAAGCAACATGAACATGACAGAGATTCCTAACAGTATTGGTAACTTATGGAAT CTACTAGAACTAGATTTGAGTGGGAACAATTTTGAATTCATCCCCGCAAGCATCAAACGG CTCACCAGGTTGAACAGACTGAATTTAAACAATTGCCAGAGACTTCAAGCATTGCCCGAT GAGCTTCCACGAGGTCTCTTGTATATCTACATCCATAGCTGCACATCACTAGTGAGTATC TCAGGTTGCTTCAACCAATATTGTCTGCGAAAGCTTGTAGCTAGCAACTGTTACAAATTG GATCAAGCAGCGCAGATTCTCATTCACCGTAACTTGAAGCTAGAGTCAGCAAAACCAGAA CACTCTTATTTTCCTGGAAGTGACATACCCACTTGCTTCAATCACCAAGTCATGGGTCCT TCGCTGAATATACAGTTACCTCAGAGTGAATCATCGTCTGACATTCTGGGATTTTCTGCC TGCATCATGATTGGAGTTGATGGACAGTACCCGATGAACAATCTGAAGATACACTGCTCT TGTATATTAAAAGATGCTGATGCTTGTGAGCTGGTTGTTATGGATGAGGTGTGGTATCCT GATCCAAAAGCTTTCACAAACATGTATTTTGGATCAGATCACCTTCTCTTATTCAGCAGA ACCTGCACGTCCATGGAAGCTTACAGCGAAGCCCTGTTTGAATTCTCAGTCGAAAACACA GAAGGAGATTCCTTTAGCCCGCTTGGAGAGGTTAAAAAATGTGCGGTACACCTTATATCA CTCAAAGACATGATGCAAGAGTTCTCTAATGACTCTGACAAAATTCAGAGTTCTGATTTG GATCTTCCAAAGGCATTTGATGACGCAAGAATTTTGAAAAGAAGAGCATATGAAACTGAG TTCTTGCATAAGGAACAACTAAATCCCAAGAGGATCAAGTTTCTTCCAGTTCCTTTGGCT CGAGAGCGTCATTCCAAATTACATCAGCGAAATGTCATACGAAAGTAA

Peptide Sequence

PEP ID	AT5G17680.2
PEP Infomation	\| disease resistance protein (TIR-NBS-LRR class) \| Chr5:5822999-5827153 FORWARD LENGTH=1295 \| 201606
Sequence	MASLPSSSSSSSSTVWKTDVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKS ISPELIDAIKGSRFAIVVVSRNYAASSWCLDELLKIMECNKDTIVPIFYEVDPSDVRRQR GSFGEDVESHSDKEKVGKWKEALKKLAAISGEDSRNWRDDSKLIKKIVKDISDKLVSTSW DDSKGLIGMSSHMDFLQSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCF MENVKEVCNRYGVRRLQVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDR SEQLNELVKETGWFGPGSRIIVTTRDRHLLLSHGINLVYKVKCLPKKEALQLFCNYAFRE EIILPHGFEELSVQAVNYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVL RVSYDGLDEQEKAIFLYISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGC VKIHDLLEQMGRELVRQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEISE VFASDRAFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRF FPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYCQ SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLKHFPEISWNTR RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENL PDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDIS ENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI GNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRA LSLSNMNMTEIPNSIGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPD ELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCYKLDQAAQILIHRNLKLESAKPE HSYFPGSDIPTCFNHQVMGPSLNIQLPQSESSSDILGFSACIMIGVDGQYPMNNLKIHCS CILKDADACELVVMDEVWYPDPKAFTNMYFGSDHLLLFSRTCTSMEAYSEALFEFSVENT EGDSFSPLGEVKKCAVHLISLKDMMQEFSNDSDKIQSSDLDLPKAFDDARILKRRAYETE FLHKEQLNPKRIKFLPVPLARERHSKLHQRNVIRK

Transcript Sequence

Transcript ID	AT5G17680.2
Transcript Infomation	\| disease resistance protein (TIR-NBS-LRR class) \| Chr5:5822881-5827153 FORWARD LENGTH=4006 \| 201606
Sequence	AGATACTGGATGATGATGATAGATACCTGCTTGAGCTAAAATAGTAAGAAGGACAAGAAT TGTCGACTTTAACTGCAATTGATGGAATCTATGTGGTAGTAGAGCTCAGAGACAATCCAT GGCTTCTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCAACAGTGTGGAAAACGGACGTTTT CGTGAGTTTTAGAGGAGAAGATGTGCGTAAAACATTCGTGAGCCATCTATTCTGCGAGTT TGATCGGATGGGGATTAAAGCTTTCAGAGACGATTTGGATCTACAGAGAGGAAAATCCAT CTCCCCTGAGCTTATAGATGCGATCAAAGGCTCCAGATTTGCCATTGTTGTGGTCTCTAG GAACTACGCAGCTTCAAGCTGGTGCTTAGACGAGCTCTTGAAGATCATGGAATGTAATAA AGATACGATTGTACCCATTTTCTACGAGGTTGATCCTTCGGATGTGAGAAGACAGAGAGG AAGTTTCGGTGAAGATGTTGAGAGTCACAGTGACAAGGAGAAAGTGGGGAAATGGAAAGA AGCTTTGAAGAAATTAGCTGCCATTTCTGGTGAAGATTCTCGGAATTGGAGGGATGACTC AAAGCTGATTAAGAAGATTGTTAAAGACATTTCTGATAAATTGGTTTCTACTTCATGGGA TGATTCAAAAGGTTTGATTGGAATGAGTTCTCATATGGACTTTCTGCAGTCTATGATATC TATAGTGGACAAGGATGTTCGAATGTTGGGGATTTGGGGAATGGGTGGAGTTGGGAAAAC TACGATTGCCAAATACTTATACAATCAACTCTCAGGTCAATTTCAAGTTCATTGCTTCAT GGAGAATGTGAAGGAAGTCTGTAACAGATATGGAGTTAGGCGTTTACAAGTGGAGTTTTT ATGCAGAATGTTTCAAGAGAGAGACAAAGAAGCGTGGAGTTCGGTTTCTTGTTGCAATAT AATAAAGGAAAGGTTCAGGCACAAAATGGTTTTCATTGTTCTTGACGATGTAGATAGATC TGAGCAACTGAATGAATTGGTGAAGGAGACTGGTTGGTTTGGTCCGGGAAGCAGAATCAT CGTGACAACACGGGATAGACATTTGCTACTTTCCCATGGAATAAATTTGGTGTATAAAGT GAAGTGTTTACCCAAAAAAGAAGCTCTCCAGCTCTTTTGTAATTATGCTTTCAGAGAAGA GATTATACTTCCACATGGGTTTGAGGAGTTATCGGTTCAAGCTGTTAACTATGCTTCTGG TCTTCCACTGGCTCTAAGAGTTTTAGGCTCCTTCCTTTATCGAAGAAGCCAAATTGAATG GGAAAGTACTCTTGCTAGGCTTAAAACTTACCCTCATAGTGATATCATGGAAGTTTTGAG AGTTAGCTACGACGGATTGGATGAGCAAGAGAAGGCTATTTTTCTCTATATATCATGTTT TTATAACATGAAGCAGGTTGATTATGTCAGAAAACTTCTGGATCTTTGTGGCTATGCTGC TGAAATCGGAATAACGATACTTACCGAGAAGTCTTTGATAGTTGAATCAAATGGATGCGT AAAGATACATGATTTGCTTGAACAGATGGGTAGAGAGCTTGTTCGTCAACAAGCAGTTAA CAACCCAGCCCAACGGTTACTATTATGGGATCCTGAAGACATATGTCATTTGCTGTCAGA AAATTCTGGAACACAACTTGTTGAAGGAATCTCTCTGAACCTCTCTGAAATTTCTGAGGT ATTTGCTAGTGATCGAGCGTTCGAGGGATTGTCTAATCTCAAACTTCTCAACTTCTATGA TCTTTCGTTTGATGGAGAGACTAGAGTGCATCTACCTAATGGCCTCAGTTATCTCCCACG CAAGCTTCGTTATCTCCGTTGGGATGGATACCCTTTAAAGACTATGCCTTCAAGATTTTT TCCTGAGTTTCTTGTTGAACTTTGTATGAGTAATAGCAATCTTGAAAAACTTTGGGATGG GATCCAGCCTCTGAGGAACTTGAAGAAGATGGATCTTTCTCGCTGTAAATACCTTGTCGA AGTTCCAGACCTCTCAAAAGCCACAAATCTGGAGGAACTAAACCTTTCCTATTGCCAAAG CTTGGTTGAGGTTACTCCATCTATCAAGAACCTAAAGGGACTTTCTTGCTTCTACTTGAC TAATTGCATCCAACTCAAGGACATTCCGATTGGAATAATTTTGAAGTCGCTTGAAACAGT GGGAATGAGTGGATGCTCAAGCCTAAAGCATTTTCCAGAAATTTCTTGGAATACTAGAAG ACTCTATCTGAGCAGTACAAAGATAGAGGAACTTCCATCATCAATCAGCCGTCTCTCTTG TCTGGTTAAATTGGATATGTCAGATTGTCAGAGACTCAGGACTCTTCCAAGCTATCTAGG GCACTTGGTCTCACTGAAATCCCTGAATTTGGACGGTTGCAGACGTCTTGAGAACCTCCC AGACACGTTACAGAATCTAACATCTCTTGAAACGCTTGAAGTGTCTGGTTGCCTTAATGT CAACGAGTTCCCTCGTGTTTCCACGAGTATAGAAGTTCTGCGTATATCTGAGACATCAAT TGAAGAAATTCCTGCAAGGATCTGTAATCTCTCTCAGCTTAGGTCCTTGGATATCTCAGA AAACAAAAGACTTGCATCACTTCCGGTAAGCATTTCTGAGCTAAGATCACTTGAAAAGCT CAAGCTTTCTGGATGTTCTGTACTCGAGAGTTTTCCACTAGAAATTTGTCAGACAATGAG CTGCTTGAGGTGGTTTGATTTAGATAGGACTAGCATTAAAGAACTACCTGAAAACATTGG GAATTTAGTAGCTCTTGAGGTGCTTCAAGCCAGTAGAACAGTGATAAGGCGAGCACCATG GTCTATTGCACGACTTACCCGTCTTCAAGTTTTAGCGATTGGGAATAGTTTCTTTACTCC AGAAGGTTTGTTGCATTCTCTTTGTCCTCCCTTATCAAGGTTTGATGACTTGAGAGCTCT GAGCCTAAGCAACATGAACATGACAGAGATTCCTAACAGTATTGGTAACTTATGGAATCT ACTAGAACTAGATTTGAGTGGGAACAATTTTGAATTCATCCCCGCAAGCATCAAACGGCT CACCAGGTTGAACAGACTGAATTTAAACAATTGCCAGAGACTTCAAGCATTGCCCGATGA GCTTCCACGAGGTCTCTTGTATATCTACATCCATAGCTGCACATCACTAGTGAGTATCTC AGGTTGCTTCAACCAATATTGTCTGCGAAAGCTTGTAGCTAGCAACTGTTACAAATTGGA TCAAGCAGCGCAGATTCTCATTCACCGTAACTTGAAGCTAGAGTCAGCAAAACCAGAACA CTCTTATTTTCCTGGAAGTGACATACCCACTTGCTTCAATCACCAAGTCATGGGTCCTTC GCTGAATATACAGTTACCTCAGAGTGAATCATCGTCTGACATTCTGGGATTTTCTGCCTG CATCATGATTGGAGTTGATGGACAGTACCCGATGAACAATCTGAAGATACACTGCTCTTG TATATTAAAAGATGCTGATGCTTGTGAGCTGGTTGTTATGGATGAGGTGTGGTATCCTGA TCCAAAAGCTTTCACAAACATGTATTTTGGATCAGATCACCTTCTCTTATTCAGCAGAAC CTGCACGTCCATGGAAGCTTACAGCGAAGCCCTGTTTGAATTCTCAGTCGAAAACACAGA AGGAGATTCCTTTAGCCCGCTTGGAGAGGTTAAAAAATGTGCGGTACACCTTATATCACT CAAAGACATGATGCAAGAGTTCTCTAATGACTCTGACAAAATTCAGAGTTCTGATTTGGA TCTTCCAAAGGCATTTGATGACGCAAGAATTTTGAAAAGAAGAGCATATGAAACTGAGTT CTTGCATAAGGAACAACTAAATCCCAAGAGGATCAAGTTTCTTCCAGTTCCTTTGGCTCG AGAGCGTCATTCCAAATTACATCAGCGAAATGTCATACGAAAGTAA