Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G17540.1
CDS Infomation

| HXXXD-type acyl-transferase family protein | Chr5:5782061-5783682 REVERSE LENGTH=1386 | 201606
Sequence

ATGTCCGGGTCACTCACGTTTAAGATTTACCGGCAGAAGCCGGAGTTAGTTTCTCCGGCG
AAGCCAACGCCAAGAGAGCTCAAACCCCTCTCAGATATTGACGACCAAGAAGGACTAAGA
TTTCACATTCCCACTATCTTTTTCTATAGACACAACCCTACTACTAACTCTGATCCTGTC
GCAGTCATTCGGAGAGCTCTCGCAGAGACGCTGGTTTACTACTATCCGTTCGCCGGTAGG
CTTCGGGAAGGACCGAACCGGAAACTGGCTGTGGATTGTACCGGTGAAGGCGTTTTGTTT
ATTGAGGCTGATGCTGACGTGACACTTGTTGAGTTTGAAGAGAAGGATGCTCTTAAGCCT
CCTTTCCCTTGCTTTGAAGAGCTTCTGTTTAACGTTGAAGGTTCTTGTGAAATGCTCAAC
ACTCCTTTGATGCTCATGCAGGTCACGCGCTTGAAATGCGGCGGTTTTATCTTCGCCGTC
CGTATCAACCACGCAATGTCCGATGCCGGCGGTCTCACGCTGTTCCTCAAAACGATGTGC
GAGTTCGTGCGTGGTTATCATGCACCTACGGTTGCTCCGGTGTGGGAACGTCACCTGCTG
AGCGCCAGAGTCCTGCTGCGTGTGACACACGCACACCGAGAGTACGACGAAATGCCGGCA
ATAGGTACAGAACTCGGCAGTAGAAGAGACAATCTGGTAGGCCGGTCACTCTTCTTCGGT
CCCTGCGAGATGTCCGCAATACGCAGGCTCCTCCCACCAAATCTTGTCAACAGCAGCACC
AATATGGAAATGCTAACGTCTTTCTTATGGCGTTATCGCACCATCGCTCTACGACCAGAC
CAGGACAAGGAGATGCGGCTCATATTAATTGTCAACGCACGTTCTAAGCTTAAAAATCCA
CCACTACCTCGAGGATACTACGGAAATGCCTTTGCGTTCCCAGTCGCAATCGCAACAGCT
AATGAACTAACTAAGAAACCGTTAGAGTTTGCTCTGAGACTAATAAAAGAGGCGAAATCG
AGCGTGACGGAGGAGTACATGCGATCACTTGCGGATCTGATGGTGATAAAGGGAAGACCA
AGCTTCTCGTCGGACGGAGCTTACTTGGTTTCGGATGTAAGAATTTTCGCAGATATTGAT
TTCGGAATTTGGGGGAAACCAGTTTACGGAGGAATTGGTACAGCCGGAGTTGAAGACCTT
CCGGGGGCTAGCTTCTACGTTTCATTTGAGAAGAGAAATGGTGAGATAGGGATCGTTGTA
CCGGTTTGTTTGCCAGAGAAGGCGATGCAGAGGTTTGTGGAAGAGCTTGAAGGCGTGTTT
AATGGTCAAGTTGTATTCAATAGAGGAAGCAAAAGCTCTAATAAATTGATCATGTCTTCT
CTGTAA

Peptide Sequence

PEP ID

AT5G17540.1
PEP Infomation

| HXXXD-type acyl-transferase family protein | Chr5:5782061-5783682 REVERSE LENGTH=461 | 201606
Sequence

MSGSLTFKIYRQKPELVSPAKPTPRELKPLSDIDDQEGLRFHIPTIFFYRHNPTTNSDPV
AVIRRALAETLVYYYPFAGRLREGPNRKLAVDCTGEGVLFIEADADVTLVEFEEKDALKP
PFPCFEELLFNVEGSCEMLNTPLMLMQVTRLKCGGFIFAVRINHAMSDAGGLTLFLKTMC
EFVRGYHAPTVAPVWERHLLSARVLLRVTHAHREYDEMPAIGTELGSRRDNLVGRSLFFG
PCEMSAIRRLLPPNLVNSSTNMEMLTSFLWRYRTIALRPDQDKEMRLILIVNARSKLKNP
PLPRGYYGNAFAFPVAIATANELTKKPLEFALRLIKEAKSSVTEEYMRSLADLMVIKGRP
SFSSDGAYLVSDVRIFADIDFGIWGKPVYGGIGTAGVEDLPGASFYVSFEKRNGEIGIVV
PVCLPEKAMQRFVEELEGVFNGQVVFNRGSKSSNKLIMSSL

Transcript Sequence

Transcript ID

AT5G17540.1
Transcript Infomation

| HXXXD-type acyl-transferase family protein | Chr5:5781987-5783729 REVERSE LENGTH=1507 | 201606
Sequence

AGTTTGTAACCACAAAATAATCCTGACTGTACAACCAAACTAACGCGATGTCCGGGTCAC
TCACGTTTAAGATTTACCGGCAGAAGCCGGAGTTAGTTTCTCCGGCGAAGCCAACGCCAA
GAGAGCTCAAACCCCTCTCAGATATTGACGACCAAGAAGGACTAAGATTTCACATTCCCA
CTATCTTTTTCTATAGACACAACCCTACTACTAACTCTGATCCTGTCGCAGTCATTCGGA
GAGCTCTCGCAGAGACGCTGGTTTACTACTATCCGTTCGCCGGTAGGCTTCGGGAAGGAC
CGAACCGGAAACTGGCTGTGGATTGTACCGGTGAAGGCGTTTTGTTTATTGAGGCTGATG
CTGACGTGACACTTGTTGAGTTTGAAGAGAAGGATGCTCTTAAGCCTCCTTTCCCTTGCT
TTGAAGAGCTTCTGTTTAACGTTGAAGGTTCTTGTGAAATGCTCAACACTCCTTTGATGC
TCATGCAGGTCACGCGCTTGAAATGCGGCGGTTTTATCTTCGCCGTCCGTATCAACCACG
CAATGTCCGATGCCGGCGGTCTCACGCTGTTCCTCAAAACGATGTGCGAGTTCGTGCGTG
GTTATCATGCACCTACGGTTGCTCCGGTGTGGGAACGTCACCTGCTGAGCGCCAGAGTCC
TGCTGCGTGTGACACACGCACACCGAGAGTACGACGAAATGCCGGCAATAGGTACAGAAC
TCGGCAGTAGAAGAGACAATCTGGTAGGCCGGTCACTCTTCTTCGGTCCCTGCGAGATGT
CCGCAATACGCAGGCTCCTCCCACCAAATCTTGTCAACAGCAGCACCAATATGGAAATGC
TAACGTCTTTCTTATGGCGTTATCGCACCATCGCTCTACGACCAGACCAGGACAAGGAGA
TGCGGCTCATATTAATTGTCAACGCACGTTCTAAGCTTAAAAATCCACCACTACCTCGAG
GATACTACGGAAATGCCTTTGCGTTCCCAGTCGCAATCGCAACAGCTAATGAACTAACTA
AGAAACCGTTAGAGTTTGCTCTGAGACTAATAAAAGAGGCGAAATCGAGCGTGACGGAGG
AGTACATGCGATCACTTGCGGATCTGATGGTGATAAAGGGAAGACCAAGCTTCTCGTCGG
ACGGAGCTTACTTGGTTTCGGATGTAAGAATTTTCGCAGATATTGATTTCGGAATTTGGG
GGAAACCAGTTTACGGAGGAATTGGTACAGCCGGAGTTGAAGACCTTCCGGGGGCTAGCT
TCTACGTTTCATTTGAGAAGAGAAATGGTGAGATAGGGATCGTTGTACCGGTTTGTTTGC
CAGAGAAGGCGATGCAGAGGTTTGTGGAAGAGCTTGAAGGCGTGTTTAATGGTCAAGTTG
TATTCAATAGAGGAAGCAAAAGCTCTAATAAATTGATCATGTCTTCTCTGTAAAAACTAC
CTTATTGATAACTTCAATGCAATGATTGTCTTAGTAAAGAAACTCGAACTCTCTGTATTT
GTTTGCA