Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G17380.1
CDS Infomation

| Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | Chr5:5724920-5726720 REVERSE LENGTH=1719 | 201606
Sequence

ATGGCGGATAAATCAGAAACCACTCCACCGTCAATTGATGGCAACGTTCTCGTGGCCAAG
TCACTCTCTCATCTCGGCGTAACCCACATGTTCGGCGTCGTTGGAATCCCCGTCACGTCT
CTAGCTAGCCGAGCTATGGCTTTAGGTATACGTTTCATCGCCTTCCACAACGAACAATCC
GCTGGTTACGCCGCTTCAGCTTACGGTTACCTCACGGGTAAACCGGGTATCCTTTTAACG
GTTTCGGGTCCGGGTTGTGTTCATGGGCTCGCGGGTCTTTCCAACGCTTGGGTTAATACA
TGGCCGATGGTGATGATCTCTGGTTCTTGTGATCAGAGAGATGTTGGTCGTGGAGATTTC
CAGGAGCTTGATCAGATCGAAGCGGTTAAAGCTTTCTCGAAATTATCAGAGAAAGCGAAA
GATGTTCGTGAAATCCCTGATTGTGTTTCTAGGGTTTTGGATCGAGCTGTTTCGGGTCGA
CCCGGTGGGTGTTATCTGGATATTCCGACTGATGTGTTGCGTCAGAAGATATCGGAATCG
GAAGCTGATAAATTGGTGGATGAGGTTGAGAGATCACGGAAGGAAGAACCGATTCGTGGA
TCTCTGAGATCGGAGATTGAATCGGCGGTTTCGTTGCTGAGGAAAGCTGAGAGGCCGTTG
ATTGTGTTTGGTAAAGGAGCTGCGTATTCGAGAGCAGAAGATGAGCTGAAGAAGCTTGTT
GAAATTACTGGAATACCCTTTTTACCAACTCCGATGGGTAAAGGTTTGTTACCGGACACA
CACGAGTTCTCGGCGACTGCGGCGAGGTCTCTTGCTATTGGGAAATGTGATGTCGCGTTG
GTGGTTGGAGCTAGGCTTAACTGGCTTCTTCATTTCGGAGAGTCGCCTAAATGGGATAAA
GATGTAAAATTTATATTGGTGGATGTCTCTGAGGAAGAGATTGAGCTAAGGAAACCTCAT
TTGGGGATTGTTGGAGATGCTAAAACTGTGATTGGATTGTTGAATAGAGAGATCAAAGAC
GATCCTTTTTGTTTAGGGAAGTCTAATTCATGGGTGGAATCGATTTCGAAGAAGGCGAAA
GAGAATGGTGAGAAGATGGAGATACAGCTTGCTAAAGATGTGGTTCCTTTCAATTTCTTG
ACTCCTATGAGGATAATCAGAGACGCTATTTTGGCTGTGGAAGGACCGAGTCCTGTTGTG
GTATCGGAAGGAGCTAATACAATGGATGTAGGAAGATCTGTTTTGGTTCAGAAAGAGCCA
AGGACAAGGCTTGATGCAGGAACTTGGGGAACTATGGGTGTTGGTTTAGGTTATTGTATT
GCTGCTGCTGTTGCTTCTCCTGATCGGCTTGTTGTCGCTGTTGAAGGAGACTCTGGTTTT
GGCTTCAGCGCCATGGAAGTCGAGACATTGGTTCGATACAATCTTGCTGTGGTGATTATA
GTCTTCAACAATGGTGGTGTCTACGGCGGTGATCGAAGGGGACCTGAAGAAATCTCCGGT
CCTCATAAAGAAGATCCAGCACCAACATCATTTGTTCCTAATGCAGGCTACCACAAGCTC
ATTGAAGCCTTTGGAGGCAAAGGTTATATTGTGGAAACACCCGATGAGCTTAAATCCGCT
CTCGCTGAGTCGTTCGCCGCAAGAAAACCCGCGGTGGTAAATGTTATTATTGATCCTTTT
GCTGGTGCTGAGAGTGGGAGATTACAGCACAAGAACTAA

Peptide Sequence

PEP ID

AT5G17380.1
PEP Infomation

| Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | Chr5:5724920-5726720 REVERSE LENGTH=572 | 201606
Sequence

MADKSETTPPSIDGNVLVAKSLSHLGVTHMFGVVGIPVTSLASRAMALGIRFIAFHNEQS
AGYAASAYGYLTGKPGILLTVSGPGCVHGLAGLSNAWVNTWPMVMISGSCDQRDVGRGDF
QELDQIEAVKAFSKLSEKAKDVREIPDCVSRVLDRAVSGRPGGCYLDIPTDVLRQKISES
EADKLVDEVERSRKEEPIRGSLRSEIESAVSLLRKAERPLIVFGKGAAYSRAEDELKKLV
EITGIPFLPTPMGKGLLPDTHEFSATAARSLAIGKCDVALVVGARLNWLLHFGESPKWDK
DVKFILVDVSEEEIELRKPHLGIVGDAKTVIGLLNREIKDDPFCLGKSNSWVESISKKAK
ENGEKMEIQLAKDVVPFNFLTPMRIIRDAILAVEGPSPVVVSEGANTMDVGRSVLVQKEP
RTRLDAGTWGTMGVGLGYCIAAAVASPDRLVVAVEGDSGFGFSAMEVETLVRYNLAVVII
VFNNGGVYGGDRRGPEEISGPHKEDPAPTSFVPNAGYHKLIEAFGGKGYIVETPDELKSA
LAESFAARKPAVVNVIIDPFAGAESGRLQHKN

Transcript Sequence

Transcript ID

AT5G17380.1
Transcript Infomation

| Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | Chr5:5724759-5726912 REVERSE LENGTH=2072 | 201606
Sequence

TACGTGTACAAGTTTGTAGATAAAATTTTCAGAGAACACACAAAATGCAAATAAAGAAGT
CAATAATAGGCTAATAGTAGCATTAATGCAAAACACGTAATCACAGTAAGAGTAAAACAC
AAATACAAAAGGCTATATAAAGAAACTAAAGCAAGTAGAAGAAACTGAAACTTTGAGCAA
ATCCAAGAGAACATGGCGGATAAATCAGAAACCACTCCACCGTCAATTGATGGCAACGTT
CTCGTGGCCAAGTCACTCTCTCATCTCGGCGTAACCCACATGTTCGGCGTCGTTGGAATC
CCCGTCACGTCTCTAGCTAGCCGAGCTATGGCTTTAGGTATACGTTTCATCGCCTTCCAC
AACGAACAATCCGCTGGTTACGCCGCTTCAGCTTACGGTTACCTCACGGGTAAACCGGGT
ATCCTTTTAACGGTTTCGGGTCCGGGTTGTGTTCATGGGCTCGCGGGTCTTTCCAACGCT
TGGGTTAATACATGGCCGATGGTGATGATCTCTGGTTCTTGTGATCAGAGAGATGTTGGT
CGTGGAGATTTCCAGGAGCTTGATCAGATCGAAGCGGTTAAAGCTTTCTCGAAATTATCA
GAGAAAGCGAAAGATGTTCGTGAAATCCCTGATTGTGTTTCTAGGGTTTTGGATCGAGCT
GTTTCGGGTCGACCCGGTGGGTGTTATCTGGATATTCCGACTGATGTGTTGCGTCAGAAG
ATATCGGAATCGGAAGCTGATAAATTGGTGGATGAGGTTGAGAGATCACGGAAGGAAGAA
CCGATTCGTGGATCTCTGAGATCGGAGATTGAATCGGCGGTTTCGTTGCTGAGGAAAGCT
GAGAGGCCGTTGATTGTGTTTGGTAAAGGAGCTGCGTATTCGAGAGCAGAAGATGAGCTG
AAGAAGCTTGTTGAAATTACTGGAATACCCTTTTTACCAACTCCGATGGGTAAAGGTTTG
TTACCGGACACACACGAGTTCTCGGCGACTGCGGCGAGGTCTCTTGCTATTGGGAAATGT
GATGTCGCGTTGGTGGTTGGAGCTAGGCTTAACTGGCTTCTTCATTTCGGAGAGTCGCCT
AAATGGGATAAAGATGTAAAATTTATATTGGTGGATGTCTCTGAGGAAGAGATTGAGCTA
AGGAAACCTCATTTGGGGATTGTTGGAGATGCTAAAACTGTGATTGGATTGTTGAATAGA
GAGATCAAAGACGATCCTTTTTGTTTAGGGAAGTCTAATTCATGGGTGGAATCGATTTCG
AAGAAGGCGAAAGAGAATGGTGAGAAGATGGAGATACAGCTTGCTAAAGATGTGGTTCCT
TTCAATTTCTTGACTCCTATGAGGATAATCAGAGACGCTATTTTGGCTGTGGAAGGACCG
AGTCCTGTTGTGGTATCGGAAGGAGCTAATACAATGGATGTAGGAAGATCTGTTTTGGTT
CAGAAAGAGCCAAGGACAAGGCTTGATGCAGGAACTTGGGGAACTATGGGTGTTGGTTTA
GGTTATTGTATTGCTGCTGCTGTTGCTTCTCCTGATCGGCTTGTTGTCGCTGTTGAAGGA
GACTCTGGTTTTGGCTTCAGCGCCATGGAAGTCGAGACATTGGTTCGATACAATCTTGCT
GTGGTGATTATAGTCTTCAACAATGGTGGTGTCTACGGCGGTGATCGAAGGGGACCTGAA
GAAATCTCCGGTCCTCATAAAGAAGATCCAGCACCAACATCATTTGTTCCTAATGCAGGC
TACCACAAGCTCATTGAAGCCTTTGGAGGCAAAGGTTATATTGTGGAAACACCCGATGAG
CTTAAATCCGCTCTCGCTGAGTCGTTCGCCGCAAGAAAACCCGCGGTGGTAAATGTTATT
ATTGATCCTTTTGCTGGTGCTGAGAGTGGGAGATTACAGCACAAGAACTAAAAAGCTTTG
TGGAGAGTCCCTTTAAATAATGTTGAAGTTGTTTGTTGTGAACAAAAAGGATATACGTTT
TAGTTTTCTGTTTTTCACTATTGTAAACCGGATCATAAACCGGTCCATTTTAAACCATAA
TTGAATAAAAACACGTTTCCGGTTCAATTCTT