Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G16910.1
CDS Infomation	\| cellulose-synthase like D2 \| Chr5:5561679-5565290 FORWARD LENGTH=3438 \| 201606
Sequence	ATGGCATCTAATAAGCATTTTGATAAAAGTCGATCAAATCTATCAAACAACTCTGATATT CAGGAGCCTGGAAGGCCACCTGCTGGTCACTCTGTCAAATTTGCTCAAAGAACTTCCTCG GGTCGCTATATCAATTACTCGAGGGACGATCTTGATAGCGAGTTGGGCGGTCAAGATTTC ATGAGCTATACAGTTCACATTCCTCCCACTCCAGATAACCAGCCAATGGACCCTTCCATT TCTCAGAAAGTTGAGGAGCAATATGTCGCTAACTCCATGTTCACTGGCGGTTTCAAGAGC AACACCAGGGCTCACCTTATGCACAAAGTTATTGAGACAGAGCCTAACCATCCACAAATG GCTGGCTCTAAAGGATCGTCTTGCGCGATCCCTGGCTGTGATGCTAAGGTTATGAGCGAT GAGAGAGGTCAAGACCTTCTTCCTTGTGAATGTGACTTTAAAATTTGTAGGGATTGCTTC ATAGATGCTGTCAAAACCGGAGGTGGGATTTGCCCCGGGTGTAAAGAACCGTACAAGAAC ACGCATTTGACCGATCAGGTTGATGAAAACGGTCAGCAAAGGCCTATGCTGCCTGGGGGT GGCGGGTCAAAGATGGAGAGAAGATTGTCGATGGTGAAGTCAACTAATAAATCAGCTTTG ATGAGGAGTCAGACTGGAGATTTTGATCACAACAGGTGGTTATTTGAGACGACTGGAACT TATGGTTATGGGAATGCTTTTTGGACAAAGGACGGGGATTTCGGGAGCGGTAAGGATGGA GATGGAGATGGTGACGGTATGGGTATGGAGGCCCAAGATTTGATGAGCAGACCGTGGAGA CCGCTTACTCGGAAGCTGAAAATTCCTGCTGGTGTTATTAGTCCATACAGGCTTTTGATA TTTATCCGTATAGTTGTTCTTGCATTGTTCTTGACTTGGAGGGTTAAACATCAAAACCCA GACGCTGTATGGTTATGGGGAATGTCTGTGGTTTGTGAGCTATGGTTTGCCTTGTCTTGG CTTCTTGATCAGCTCCCTAAGCTATGCCCGATTAATCGTGCCACCGATCTTCAAGTCTTG AAGGAAAAGTTTGAAACACCGACAGCCAGCAACCCGACCGGCAAATCCGACCTTCCTGGA TTCGATGTCTTTGTCTCTACTGCGGATCCGGAGAAAGAACCTCCTCTGGTCACTGCTAAT ACCATTTTATCTATTCTTGCTGCGGAATATCCTGTTGAGAAGCTTTCTTGCTATGTATCT GATGATGGAGGGGCGCTTCTTACGTTTGAAGCAATGGCTGAAGCTGCTAGCTTTGCCAAC ATTTGGGTTCCTTTTTGTCGTAAACATGCGATCGAGCCGAGGAATCCTGATTCCTACTTT AGCTTAAAGAGAGATCCTTACAAGAACAAAGTGAAGTCTGATTTCGTGAAGGATCGTAGA CGGGTTAAGCGTGAGTTTGATGAGTTTAAAGTCAGGGTTAACAGCTTGCCTGATTCTATC AGGCGACGTTCTGATGCTTATCATGCCAGAGAAGAAATCAAAGCCATGAAGATGCAGAGG CAGAACAGGGACGATGAGCCTATGGAGCCCGTGAAGATTCCTAAAGCTACATGGATGGCT GATGGTACTCACTGGCCTGGAACTTGGTTGACTTCTGCCAGTGATCATGCCAAGGGAGAC CACGCGGGTATCATTCAGGTGATGTTGAAGCCACCTAGTGATGAACCACTACACGGAGTA TCCGAAGGGTTTCTTGATCTAACCGACGTGGACATTCGACTCCCGCTCCTTGTGTATGTT TCTCGTGAGAAGCGACCTGGTTATGATCATAACAAGAAGGCTGGAGCCATGAACGCCTTA GTCAGAGCTTCTGCGATTATGTCAAATGGACCGTTCATACTCAATCTTGACTGTGATCAT TACATATACAACTCTGAGGCTCTGAGAGAAGGCATGTGTTTCATGATGGATAGAGGCGGG GATCGTCTTTGCTACGTTCAGTTTCCGCAGCGGTTTGAAGGTATTGACCCATCTGATAGA TATGCTAATCACAACACTGTCTTCTTTGACGTCAACATGAGAGCTCTTGATGGGCTTATG GGTCCGGTTTATGTCGGAACCGGTTGTCTCTTCCGAAGAATCGCGCTTTATGGATTCAAT CCGCCTCGAAGCAAGGACTTTTCCCCAAGTTGCTGGAGTTGTTGTTTCCCTCGTAGCAAG AAGAAGAATATTCCTGAAGAAAACCGAGCTCTGCGTATGAGTGATTATGATGACGAAGAG ATGAATCTCTCTCTAGTCCCGAAGAAGTTCGGTAACTCAACATTCCTCATTGATTCAATT CCCGTTGCTGAGTTCCAAGGCCGGCCTCTCGCGGACCACCCTGCGGTTAAAAACGGGCGT CCACCGGGTGCACTCACCATTCCTCGAGAACTTCTTGATGCATCGACTGTAGCAGAAGCC ATTGCTGTTATCTCTTGCTGGTACGAGGATAAAACTGAGTGGGGATCACGTATCGGATGG ATTTACGGTTCAGTCACTGAAGATGTTGTCACAGGTTATAGAATGCATAACCGAGGCTGG AAATCGGTTTACTGTGTGACGAAACGGGATGCTTTCCGTGGCACAGCTCCTATTAACTTG ACGGATAGGCTTCACCAGGTTCTCCGTTGGGCTACTGGCTCGGTGGAGATCTTTTTCTCC CGTAACAACGCTCTTCTCGCAAGCTCGAAAATGAAAATACTCCAGAGAATTGCCTACTTA AACGTCGGTATCTACCCGTTCACATCGATCTTCCTCATCGTATACTGTTTCCTACCAGCG CTCTCCCTCTTCTCTGGTCAGTTCATCGTCCAGACGCTCAACGTCACTTTCCTAGTCTAC CTTCTCATCATCTCCATCACTCTCTGCTTACTGGCCCTCCTCGAGATCAAATGGTCAGGA ATCTCACTCGAGGAATGGTGGAGAAACGAACAGTTTTGGCTCATTGGAGGAACAAGTGCT CATCTCGCAGCTGTGCTTCAAGGTTTGCTCAAAGTTGTAGCAGGAGTCGAAATCTCCTTC ACGCTCACGAGTAAATCCGGAGGAGATGATATAGACGACGAGTTTGCGGATTTGTACATG GTGAAATGGACTTCACTTATGATCCCTCCGATTACCATCATTATGGTGAATCTGATAGCG ATTGCGGTTGGATTCAGCAGGACGATTTACAGTGTGGTTCCTCAGTGGAGTAAACTGATT GGAGGAGTGTTCTTCAGTTTTTGGGTTTTGGCACATCTTTATCCATTTGCTAAAGGTCTA ATGGGAAGAAGAGGAAGAACACCAACGATTGTGTATGTTTGGTCTGGTCTTGTGGCCATT ACCATTTCTCTTCTTTGGGTCGCCATTAATCCACCGGCTGGTAATACTGAGATCGGAGGA AACTTCAGTTTTCCATGA

Peptide Sequence

PEP ID	AT5G16910.1
PEP Infomation	\| cellulose-synthase like D2 \| Chr5:5561679-5565290 FORWARD LENGTH=1145 \| 201606
Sequence	MASNKHFDKSRSNLSNNSDIQEPGRPPAGHSVKFAQRTSSGRYINYSRDDLDSELGGQDF MSYTVHIPPTPDNQPMDPSISQKVEEQYVANSMFTGGFKSNTRAHLMHKVIETEPNHPQM AGSKGSSCAIPGCDAKVMSDERGQDLLPCECDFKICRDCFIDAVKTGGGICPGCKEPYKN THLTDQVDENGQQRPMLPGGGGSKMERRLSMVKSTNKSALMRSQTGDFDHNRWLFETTGT YGYGNAFWTKDGDFGSGKDGDGDGDGMGMEAQDLMSRPWRPLTRKLKIPAGVISPYRLLI FIRIVVLALFLTWRVKHQNPDAVWLWGMSVVCELWFALSWLLDQLPKLCPINRATDLQVL KEKFETPTASNPTGKSDLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVS DDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRR RVKREFDEFKVRVNSLPDSIRRRSDAYHAREEIKAMKMQRQNRDDEPMEPVKIPKATWMA DGTHWPGTWLTSASDHAKGDHAGIIQVMLKPPSDEPLHGVSEGFLDLTDVDIRLPLLVYV SREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSEALREGMCFMMDRGG DRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLFRRIALYGFN PPRSKDFSPSCWSCCFPRSKKKNIPEENRALRMSDYDDEEMNLSLVPKKFGNSTFLIDSI PVAEFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGW IYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFS RNNALLASSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVY LLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISF TLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLI GGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGNTEIGG NFSFP

Transcript Sequence

Transcript ID	AT5G16910.1
Transcript Infomation	\| cellulose-synthase like D2 \| Chr5:5560607-5565660 FORWARD LENGTH=4501 \| 201606
Sequence	TAATCTTCTATGGTAAGTAAATTTTCGGTATCCCTATTCAAGAAAGAGAAAAAAAATGGA AACAATATTTAACGCGTTAAAAGATAAATAAGACCACAAGAGTTAAAAAGAGTTGTTCTT ACTTTCTTCTCTACCTTGTCCGAAAAACCTCAGTCCCCCCCCCAAATCAATTAAAACGTT TCAAGAAAAAAAAAAAAAAGTGTACTACGTCAACTTGTTTTTTCCGGCGGCGTTCCACCT TCGTCTTCGCTGTCTCACCGCGTCATAAAATTTTCTACCTTAGTAAAAATTTCGAAATAG ATCGTAGAGATCTTCCTTCTTGATTTGTCGTCTCGATTCTACAAAATTTGGCAATTTCTT TGTTTTATATATATTTTAAGATCTTTGAATATATATTTTGGGGATAAATCGGCTAACGTG TATTAGTTAGCAGGAGTGCTCAAGTATTTGCTCACGACTAAGTCCTTTTCTCCTCTTCTT CTTCCTTTCACTATCTCTTCTTATCAAATGCCTCATAATAATATCCAGTTGGGTGGCACG ACACGACCGCGTTGAATACTTCAGACGGATTTGTTAACAACAAAGTCTCTACTTCTTCTT CTGTTAATTACTATATAACTCAAAGATCTGAGTTTCTTCTCTCTTCTTAGCGTTCCTTTC CTCTGAAGGGATCTGCCAAGTTAGATCCTAACTATGGCATCTAATAAGCATTTTGATAAA AGTCGATCAAATCTATCAAACAACTCTGATATTCAGGAGCCTGGAAGGCCACCTGCTGGT CACTCTGTCAAATTTGCTCAAAGAACTTCCTCGGGTCGCTATATCAATTACTCGAGGGAC GATCTTGATAGCGAGTTGGGCGGTCAAGATTTCATGAGCTATACAGTTCACATTCCTCCC ACTCCAGATAACCAGCCAATGGACCCTTCCATTTCTCAGAAAGTTGAGGAGCAATATGTC GCTAACTCCATGTTCACTGGCGGTTTCAAGAGCAACACCAGGGCTCACCTTATGCACAAA GTTATTGAGACAGAGCCTAACCATCCACAAATGGCTGGCTCTAAAGGATCGTCTTGCGCG ATCCCTGGCTGTGATGCTAAGGTTATGAGCGATGAGAGAGGTCAAGACCTTCTTCCTTGT GAATGTGACTTTAAAATTTGTAGGGATTGCTTCATAGATGCTGTCAAAACCGGAGGTGGG ATTTGCCCCGGGTGTAAAGAACCGTACAAGAACACGCATTTGACCGATCAGGTTGATGAA AACGGTCAGCAAAGGCCTATGCTGCCTGGGGGTGGCGGGTCAAAGATGGAGAGAAGATTG TCGATGGTGAAGTCAACTAATAAATCAGCTTTGATGAGGAGTCAGACTGGAGATTTTGAT CACAACAGGTGGTTATTTGAGACGACTGGAACTTATGGTTATGGGAATGCTTTTTGGACA AAGGACGGGGATTTCGGGAGCGGTAAGGATGGAGATGGAGATGGTGACGGTATGGGTATG GAGGCCCAAGATTTGATGAGCAGACCGTGGAGACCGCTTACTCGGAAGCTGAAAATTCCT GCTGGTGTTATTAGTCCATACAGGCTTTTGATATTTATCCGTATAGTTGTTCTTGCATTG TTCTTGACTTGGAGGGTTAAACATCAAAACCCAGACGCTGTATGGTTATGGGGAATGTCT GTGGTTTGTGAGCTATGGTTTGCCTTGTCTTGGCTTCTTGATCAGCTCCCTAAGCTATGC CCGATTAATCGTGCCACCGATCTTCAAGTCTTGAAGGAAAAGTTTGAAACACCGACAGCC AGCAACCCGACCGGCAAATCCGACCTTCCTGGATTCGATGTCTTTGTCTCTACTGCGGAT CCGGAGAAAGAACCTCCTCTGGTCACTGCTAATACCATTTTATCTATTCTTGCTGCGGAA TATCCTGTTGAGAAGCTTTCTTGCTATGTATCTGATGATGGAGGGGCGCTTCTTACGTTT GAAGCAATGGCTGAAGCTGCTAGCTTTGCCAACATTTGGGTTCCTTTTTGTCGTAAACAT GCGATCGAGCCGAGGAATCCTGATTCCTACTTTAGCTTAAAGAGAGATCCTTACAAGAAC AAAGTGAAGTCTGATTTCGTGAAGGATCGTAGACGGGTTAAGCGTGAGTTTGATGAGTTT AAAGTCAGGGTTAACAGCTTGCCTGATTCTATCAGGCGACGTTCTGATGCTTATCATGCC AGAGAAGAAATCAAAGCCATGAAGATGCAGAGGCAGAACAGGGACGATGAGCCTATGGAG CCCGTGAAGATTCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGAACTTGG TTGACTTCTGCCAGTGATCATGCCAAGGGAGACCACGCGGGTATCATTCAGGTGATGTTG AAGCCACCTAGTGATGAACCACTACACGGAGTATCCGAAGGGTTTCTTGATCTAACCGAC GTGGACATTCGACTCCCGCTCCTTGTGTATGTTTCTCGTGAGAAGCGACCTGGTTATGAT CATAACAAGAAGGCTGGAGCCATGAACGCCTTAGTCAGAGCTTCTGCGATTATGTCAAAT GGACCGTTCATACTCAATCTTGACTGTGATCATTACATATACAACTCTGAGGCTCTGAGA GAAGGCATGTGTTTCATGATGGATAGAGGCGGGGATCGTCTTTGCTACGTTCAGTTTCCG CAGCGGTTTGAAGGTATTGACCCATCTGATAGATATGCTAATCACAACACTGTCTTCTTT GACGTCAACATGAGAGCTCTTGATGGGCTTATGGGTCCGGTTTATGTCGGAACCGGTTGT CTCTTCCGAAGAATCGCGCTTTATGGATTCAATCCGCCTCGAAGCAAGGACTTTTCCCCA AGTTGCTGGAGTTGTTGTTTCCCTCGTAGCAAGAAGAAGAATATTCCTGAAGAAAACCGA GCTCTGCGTATGAGTGATTATGATGACGAAGAGATGAATCTCTCTCTAGTCCCGAAGAAG TTCGGTAACTCAACATTCCTCATTGATTCAATTCCCGTTGCTGAGTTCCAAGGCCGGCCT CTCGCGGACCACCCTGCGGTTAAAAACGGGCGTCCACCGGGTGCACTCACCATTCCTCGA GAACTTCTTGATGCATCGACTGTAGCAGAAGCCATTGCTGTTATCTCTTGCTGGTACGAG GATAAAACTGAGTGGGGATCACGTATCGGATGGATTTACGGTTCAGTCACTGAAGATGTT GTCACAGGTTATAGAATGCATAACCGAGGCTGGAAATCGGTTTACTGTGTGACGAAACGG GATGCTTTCCGTGGCACAGCTCCTATTAACTTGACGGATAGGCTTCACCAGGTTCTCCGT TGGGCTACTGGCTCGGTGGAGATCTTTTTCTCCCGTAACAACGCTCTTCTCGCAAGCTCG AAAATGAAAATACTCCAGAGAATTGCCTACTTAAACGTCGGTATCTACCCGTTCACATCG ATCTTCCTCATCGTATACTGTTTCCTACCAGCGCTCTCCCTCTTCTCTGGTCAGTTCATC GTCCAGACGCTCAACGTCACTTTCCTAGTCTACCTTCTCATCATCTCCATCACTCTCTGC TTACTGGCCCTCCTCGAGATCAAATGGTCAGGAATCTCACTCGAGGAATGGTGGAGAAAC GAACAGTTTTGGCTCATTGGAGGAACAAGTGCTCATCTCGCAGCTGTGCTTCAAGGTTTG CTCAAAGTTGTAGCAGGAGTCGAAATCTCCTTCACGCTCACGAGTAAATCCGGAGGAGAT GATATAGACGACGAGTTTGCGGATTTGTACATGGTGAAATGGACTTCACTTATGATCCCT CCGATTACCATCATTATGGTGAATCTGATAGCGATTGCGGTTGGATTCAGCAGGACGATT TACAGTGTGGTTCCTCAGTGGAGTAAACTGATTGGAGGAGTGTTCTTCAGTTTTTGGGTT TTGGCACATCTTTATCCATTTGCTAAAGGTCTAATGGGAAGAAGAGGAAGAACACCAACG ATTGTGTATGTTTGGTCTGGTCTTGTGGCCATTACCATTTCTCTTCTTTGGGTCGCCATT AATCCACCGGCTGGTAATACTGAGATCGGAGGAAACTTCAGTTTTCCATGATAGGTTGAT TTCTTTCTTGTCAAAAATCACAATACAGAACAAGAAAAACTCGTTGTCTTTTTATTGTAT TAAATCATATTCCTTTATTAGATTTTTTGTTTTCTTTCTGTCTGAAGATGATGATGGATC ATGTTAGGACAAAGATCGGTTAAATATAGTTTGAACGAGTGCAGGAACTTAGTTTCCCTC GTTGTCCTTTTTTGGTTCTCTGTTGTATCATTTGTTTATGAACATGAATGCTTTGCTCAT TACCTTTGTTCCACTTTCTATGTAAAGAGGCCATTTTTTCACTGTGGTCGTATTTGTTGT GACTTGTAAGTAACCTTTGATTTGTGGTGGAACTAGACAGTCAGCTATTACTAAAATGGT G