Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G16680.1
CDS Infomation	\| RING/FYVE/PHD zinc finger superfamily protein \| Chr5:5467534-5472956 REVERSE LENGTH=3936 \| 201606
Sequence	ATGGCTGATAGAAGAGTTGGTAAGCGCCAAATGGGTCAGAGAGGTTTTTCAAAAGTGGAG TCTGGAACTTGTAATGTTTGTTCTGCTCCTTGTTCATCATGCATGCACCGTAATGTTGGT TTCACAGGATCAAAGTTGGACGAGTCATCAGATGAAAACTGTCATGGAGTAGTGGGCAGC CAGTGTTCTGTAAACGAGGATGATCTTTTGCCTTCTTCTATGGTTAATGCTCACAAGAGT TTAAATAACACTGCTAGTGAAGCAAGCAATCTTGTCAATTCCAGTCATGATGCTCTCTCT GAGAATGCTGAGAGTAAGGAAACTATAAGATGTTCTGGGATATCAGATGATTCCGGAGCT GCTGCAATGACTTCTAAGCCATCTCTTTCTGGGAGCAGGATGAAACATAAAGTTTCTGCA TCAGCTAATATGTTAGATCAGAGCTCTAACTGTATAGAAGACCAGGAAGATGGGATCTTG TCTGCTGATCGAGCCAAACAGTTGAAGTCAGGTTGTTCTAATAACGAGATTGGCAATAAG GATTTAGCTGATGGTTCAGCTCTCAATTCTGATCCAATTCCGGGTGGATCTAGGAAAGAT GAAGTGAAATTAGAATCTTTGCAGAATCCATCATCCAACCATGATGACAGAGTCAGTTCT GAGAAGGGAAATTTCAAGGAAAAATCAAGACCCGGGGGTAACAAAGAGAGACAGGAACCT TCAGTTGAAGGATCTACGCGTTCAGGAGAGAACAGGAAGGATGGTAAGTCAAGTAAGAGC TCTTCGTCCAACTCATCAGCTGTGTCTGAGAGCGAGAGTGATGATTCTGAAATGGTCGAA CATGATGTAAAGGTTTGTGATATCTGTGGAGATGCTGGTCGTGAAGATTTACTCGCTATC TGTAGCGGATGCAGTGATGGGGCAGAACACACCTATTGCATGCGGGAAATGCTGGATGAA GTTCCTGAGGGTGATTGGCTATGTGAAGAATGTGCTGAGGAAGCTGAAAAGCAGAAGCAA GAAGCTAAGAGAAAAAGAGAAACTGAGGTAACCTTCAATACTTATAGCTCTGGCAAAAGG CACGCAGATAAAATTGAGGCCGCTCCAGATGCTAAAAGACAGGTGGTTGAGGCTTCAACT GGCTCACCCAAGAAATCCATTCTCCCCAGAGTAGGTGCGTTATCTCGGGAAACATCATTC AAGGGCTTAGACAGGTTAAGGGGAAAGCTAAATCATCAAACATCATTCAGTGATGACACA GAAAGTGCACGATCTGCTGGTTCACAGCTCCAACCTCCAAAAGGTGCATTTTTGAAATCC AGTTCCTTTAATTGTTCGAGCTCGAAACCGAAAGTGCAACTTATGGATGATGCTATTCAC CCAAGACAGAAGACTGGCAAAGAAGATACTGCACTTGATTTAAAAGTGGGGGGTTTTAGA AATGTAGGCAAGTCAATGCCAAGTAGAACTACAGATGCAGGGAATTCTGGTGGAAGCGAC TCACAAGCAAAAATGCTTGGATCAAAAGTTTATCATTCACAAGAAGGCAAAAGCTTAAAG CAAGTGAAAGATCGTAATAGAGAAGCTAATGCATCAGCATCCTCCATTGATCAGAAGTTA AAGTCACGCGGCAATTCGTCTGTTTCACATGCAAACAATAATCGTGATTTAAAGGGTTTG CAGTCTGATGGTAAACGAGGTAACTTGACGAAACAAGTCAGCAATCTAAGCCGAAACCGT CTAGAAAATTCAGTTGTTTCGGGAGGAGATATTTCCACAAATGAAAAGTGCAGTGCCAGC GAGCAAAGTTCAAGTCAAGCTGACTGTAAGGATGAACTGCCATCCACTTCTTGTACGGGT GAAGGCATGCCAAACCACGGTACTGTAGCTTTACAGGATGGATTGCCGCGGTCCAGGGTA CCTAGAGAGGTAGGGAAGAAAAGCAAAGAAGCCTTCAGTAAACGCCAAAGGTCTAGCCTG TTGGCTGGTGCAAAAGGCTTACCATCATCTCAAAAGGGAGGTCAGACTGCAGAATCCAGC GACACCTCAGGCGTGTCTGATAGTGATCTCTCTACCACGAAAAACGTTAAGGAGGATTTA AATAAGGGTAATAGGTTACGAGCAGCAGTAGATGCTGCTCTGCGTAAAAAGCCCAGCTTT GGCAAGAACAGAGTATTGGAGCAATCTGATGCGTCATTGGTAGCTAATGTGGATTCTAGT TCTGAAAAGACTCTACGAAATCAATTGCCTTCAAAGATGCATAAGAATCATGTGTCACAC GAAGGATTGCAAGGAGGGCATCCGATTTTATGGCCTACTTCTGATCCGTACAAGCAGACA ATTGTAACAAATGAGAAGCAGCTTATATTCCCTGGTGCTGATACTATACCTTCACGATTG GTGGAACCTGAAGTCAGTTTTCCCGCCGTAAAGCCTGTCATGAGAGATTTGCCTTTAGTT CCCTCACCTGTTATGTTGAGAAGCTCAGCCATTCCGGACCATGAGTTTATATGGCAGGGG GACTTAGAGGTGCGGAAAATCATAAACCAGTCAGCTATGCATAGCGGAATTCAAGCACAT TTATCAACCTTAGCATCACCCAGGGTTGCTGAAGTGGTGAATAAATTTCCAGAAACTTTC AGTTTGAATGAAGTACCTCGGAAGAGTACATGGCCTACACAATTTGAAAAATTAGGTACT AAGGAAGCCCATATAGCTCTATTCTTCTTTGCAAAGGACACTGAGAGTTATGAGAGAAAT TATAAGCCTCTGGTAGATAACATGATCAAGAACGATTTAGCCCTGAAAGGAAATCTCGAT AACGTTGACCTTTTGATTTTTGCATCCAACCAGCTTCCTTCGAATTGCCAGCGCTGGAAC ATGTTATATTTCCTTTGGGGTGTCTTCCAAGGAAGAAAAGAGACTAACCCACAAAAGAAC ACATCTTTGCCTACTTCAAATGTTTTGCCGCGTGACAGAGACCCCAAGGAGCTGTGTCAA ACGAGTTCTCCTTCCAAGCATTTGGAGAAAGGGTCTTCTCTACGTGAGAGCTCCAGCAAC GGAATTGAAACACGGAATGGGACAGATGCACGTAGTCATGAGAATCCAAATAACAGGGAA TCCTCTATTGAGCGATCACCGAGCAAAAAGGAGGATATTGCTCTTAAAGTGGAAGAAGCA GGTGTGAATCACATCCCCCCTCAAGTTACTGGATCAAATTCTGGAGATAGTCTAGTGAGG AAGGTTCAGAAAGTCGAGGAACAAGAATTAGGTGGTAGGAAGGATCTGCCATTGACGGTC ATGGGCTCAGGGATCCAGTCCCATGGGCAAGATAATCCTCTAGAGAAAGATCTCAACAGT AGTCAGGCTAGTCACAGGAAGCGTCCACTTTGGGAACTGAGTAACCCCGCTAACGAGAAT TCATCTGCCATAAACCAGAAAGTGGAGCTCAATAATGACGGTTTATGCGAAGGATCTCCG AATAAGAAGCTGAAGACAGAAAACGGAAGCAGCAGCCTCTGCCGGGATACATCTGGTCAC GATTCCGGGATAATGAAAAAGAGTCCAAAAGTCGTGTTCCCATTGGACTTGAATGACGAC AGTGAAATGGTGGATAATCTCAGCCCACTAGGCAATGACGAGAATAACAACAATAGACGT TTAATAAGCGGTACAGTCCCGAATCTGGAGCTGGCATTAGGAGCTGAGGAAACAACAGAA GCAACAATGGGACTATTACCTTTCTTAAGCAGAAGTAGCAACTCTGGTGAACAAAGTAAT AATAGTATGAATAAAGAAAAACAGAAAGCAGATGAAGAAGAAGAAGATGACGCCGAAGTG GCAGCTTCTCTGTCGTTATCACTCTCATTTCCGGGAACTGAGGAGAGGAAGAATGTGAAT ACTCCGTTGTTCCTGTTCAGAGACCTTCCCAGATAA

Peptide Sequence

PEP ID	AT5G16680.1
PEP Infomation	\| RING/FYVE/PHD zinc finger superfamily protein \| Chr5:5467534-5472956 REVERSE LENGTH=1311 \| 201606
Sequence	MADRRVGKRQMGQRGFSKVESGTCNVCSAPCSSCMHRNVGFTGSKLDESSDENCHGVVGS QCSVNEDDLLPSSMVNAHKSLNNTASEASNLVNSSHDALSENAESKETIRCSGISDDSGA AAMTSKPSLSGSRMKHKVSASANMLDQSSNCIEDQEDGILSADRAKQLKSGCSNNEIGNK DLADGSALNSDPIPGGSRKDEVKLESLQNPSSNHDDRVSSEKGNFKEKSRPGGNKERQEP SVEGSTRSGENRKDGKSSKSSSSNSSAVSESESDDSEMVEHDVKVCDICGDAGREDLLAI CSGCSDGAEHTYCMREMLDEVPEGDWLCEECAEEAEKQKQEAKRKRETEVTFNTYSSGKR HADKIEAAPDAKRQVVEASTGSPKKSILPRVGALSRETSFKGLDRLRGKLNHQTSFSDDT ESARSAGSQLQPPKGAFLKSSSFNCSSSKPKVQLMDDAIHPRQKTGKEDTALDLKVGGFR NVGKSMPSRTTDAGNSGGSDSQAKMLGSKVYHSQEGKSLKQVKDRNREANASASSIDQKL KSRGNSSVSHANNNRDLKGLQSDGKRGNLTKQVSNLSRNRLENSVVSGGDISTNEKCSAS EQSSSQADCKDELPSTSCTGEGMPNHGTVALQDGLPRSRVPREVGKKSKEAFSKRQRSSL LAGAKGLPSSQKGGQTAESSDTSGVSDSDLSTTKNVKEDLNKGNRLRAAVDAALRKKPSF GKNRVLEQSDASLVANVDSSSEKTLRNQLPSKMHKNHVSHEGLQGGHPILWPTSDPYKQT IVTNEKQLIFPGADTIPSRLVEPEVSFPAVKPVMRDLPLVPSPVMLRSSAIPDHEFIWQG DLEVRKIINQSAMHSGIQAHLSTLASPRVAEVVNKFPETFSLNEVPRKSTWPTQFEKLGT KEAHIALFFFAKDTESYERNYKPLVDNMIKNDLALKGNLDNVDLLIFASNQLPSNCQRWN MLYFLWGVFQGRKETNPQKNTSLPTSNVLPRDRDPKELCQTSSPSKHLEKGSSLRESSSN GIETRNGTDARSHENPNNRESSIERSPSKKEDIALKVEEAGVNHIPPQVTGSNSGDSLVR KVQKVEEQELGGRKDLPLTVMGSGIQSHGQDNPLEKDLNSSQASHRKRPLWELSNPANEN SSAINQKVELNNDGLCEGSPNKKLKTENGSSSLCRDTSGHDSGIMKKSPKVVFPLDLNDD SEMVDNLSPLGNDENNNNRRLISGTVPNLELALGAEETTEATMGLLPFLSRSSNSGEQSN NSMNKEKQKADEEEEDDAEVAASLSLSLSFPGTEERKNVNTPLFLFRDLPR

Transcript Sequence

Transcript ID	AT5G16680.1
Transcript Infomation	\| RING/FYVE/PHD zinc finger superfamily protein \| Chr5:5467228-5473592 REVERSE LENGTH=4626 \| 201606
Sequence	ATATATATGTATATGTGTATATGCGGGCGTATAGATCCTGAGAGGTATATATCTACAGTT TTCATCTCTGGCTCGTGTTGTTTTGTGTATATCACGAGGAAAGGCCAAAAATCGAGAAGA AAACTTGAGAGCCATCACTGAATCTTTCTTAGACCAGTGAAGGAAAGATAGAAAGATAGA TATTTGTCAAATCAAATCTGGATATAGAGATAAGTTAGGGTTTGTAGGAGTTGGAGAGGG AAATTAGGGTTTCGTGTTTCTCAATAGGTTGATGGAGATGGTGAGGGAAGCGAATTCAAG GGGGAGATGATTTTGAGACCTGAATCATTGGCAAGGCTGGATAGAAATCTGTTTGGCAAG TCAGGAAATTTAATTTAATTGAAGATGGCTGATAGAAGAGTTGGTAAGCGCCAAATGGGT CAGAGAGGTTTTTCAAAAGTGGAGTCTGGAACTTGTAATGTTTGTTCTGCTCCTTGTTCA TCATGCATGCACCGTAATGTTGGTTTCACAGGATCAAAGTTGGACGAGTCATCAGATGAA AACTGTCATGGAGTAGTGGGCAGCCAGTGTTCTGTAAACGAGGATGATCTTTTGCCTTCT TCTATGGTTAATGCTCACAAGAGTTTAAATAACACTGCTAGTGAAGCAAGCAATCTTGTC AATTCCAGTCATGATGCTCTCTCTGAGAATGCTGAGAGTAAGGAAACTATAAGATGTTCT GGGATATCAGATGATTCCGGAGCTGCTGCAATGACTTCTAAGCCATCTCTTTCTGGGAGC AGGATGAAACATAAAGTTTCTGCATCAGCTAATATGTTAGATCAGAGCTCTAACTGTATA GAAGACCAGGAAGATGGGATCTTGTCTGCTGATCGAGCCAAACAGTTGAAGTCAGGTTGT TCTAATAACGAGATTGGCAATAAGGATTTAGCTGATGGTTCAGCTCTCAATTCTGATCCA ATTCCGGGTGGATCTAGGAAAGATGAAGTGAAATTAGAATCTTTGCAGAATCCATCATCC AACCATGATGACAGAGTCAGTTCTGAGAAGGGAAATTTCAAGGAAAAATCAAGACCCGGG GGTAACAAAGAGAGACAGGAACCTTCAGTTGAAGGATCTACGCGTTCAGGAGAGAACAGG AAGGATGGTAAGTCAAGTAAGAGCTCTTCGTCCAACTCATCAGCTGTGTCTGAGAGCGAG AGTGATGATTCTGAAATGGTCGAACATGATGTAAAGGTTTGTGATATCTGTGGAGATGCT GGTCGTGAAGATTTACTCGCTATCTGTAGCGGATGCAGTGATGGGGCAGAACACACCTAT TGCATGCGGGAAATGCTGGATGAAGTTCCTGAGGGTGATTGGCTATGTGAAGAATGTGCT GAGGAAGCTGAAAAGCAGAAGCAAGAAGCTAAGAGAAAAAGAGAAACTGAGGTAACCTTC AATACTTATAGCTCTGGCAAAAGGCACGCAGATAAAATTGAGGCCGCTCCAGATGCTAAA AGACAGGTGGTTGAGGCTTCAACTGGCTCACCCAAGAAATCCATTCTCCCCAGAGTAGGT GCGTTATCTCGGGAAACATCATTCAAGGGCTTAGACAGGTTAAGGGGAAAGCTAAATCAT CAAACATCATTCAGTGATGACACAGAAAGTGCACGATCTGCTGGTTCACAGCTCCAACCT CCAAAAGGTGCATTTTTGAAATCCAGTTCCTTTAATTGTTCGAGCTCGAAACCGAAAGTG CAACTTATGGATGATGCTATTCACCCAAGACAGAAGACTGGCAAAGAAGATACTGCACTT GATTTAAAAGTGGGGGGTTTTAGAAATGTAGGCAAGTCAATGCCAAGTAGAACTACAGAT GCAGGGAATTCTGGTGGAAGCGACTCACAAGCAAAAATGCTTGGATCAAAAGTTTATCAT TCACAAGAAGGCAAAAGCTTAAAGCAAGTGAAAGATCGTAATAGAGAAGCTAATGCATCA GCATCCTCCATTGATCAGAAGTTAAAGTCACGCGGCAATTCGTCTGTTTCACATGCAAAC AATAATCGTGATTTAAAGGGTTTGCAGTCTGATGGTAAACGAGGTAACTTGACGAAACAA GTCAGCAATCTAAGCCGAAACCGTCTAGAAAATTCAGTTGTTTCGGGAGGAGATATTTCC ACAAATGAAAAGTGCAGTGCCAGCGAGCAAAGTTCAAGTCAAGCTGACTGTAAGGATGAA CTGCCATCCACTTCTTGTACGGGTGAAGGCATGCCAAACCACGGTACTGTAGCTTTACAG GATGGATTGCCGCGGTCCAGGGTACCTAGAGAGGTAGGGAAGAAAAGCAAAGAAGCCTTC AGTAAACGCCAAAGGTCTAGCCTGTTGGCTGGTGCAAAAGGCTTACCATCATCTCAAAAG GGAGGTCAGACTGCAGAATCCAGCGACACCTCAGGCGTGTCTGATAGTGATCTCTCTACC ACGAAAAACGTTAAGGAGGATTTAAATAAGGGTAATAGGTTACGAGCAGCAGTAGATGCT GCTCTGCGTAAAAAGCCCAGCTTTGGCAAGAACAGAGTATTGGAGCAATCTGATGCGTCA TTGGTAGCTAATGTGGATTCTAGTTCTGAAAAGACTCTACGAAATCAATTGCCTTCAAAG ATGCATAAGAATCATGTGTCACACGAAGGATTGCAAGGAGGGCATCCGATTTTATGGCCT ACTTCTGATCCGTACAAGCAGACAATTGTAACAAATGAGAAGCAGCTTATATTCCCTGGT GCTGATACTATACCTTCACGATTGGTGGAACCTGAAGTCAGTTTTCCCGCCGTAAAGCCT GTCATGAGAGATTTGCCTTTAGTTCCCTCACCTGTTATGTTGAGAAGCTCAGCCATTCCG GACCATGAGTTTATATGGCAGGGGGACTTAGAGGTGCGGAAAATCATAAACCAGTCAGCT ATGCATAGCGGAATTCAAGCACATTTATCAACCTTAGCATCACCCAGGGTTGCTGAAGTG GTGAATAAATTTCCAGAAACTTTCAGTTTGAATGAAGTACCTCGGAAGAGTACATGGCCT ACACAATTTGAAAAATTAGGTACTAAGGAAGCCCATATAGCTCTATTCTTCTTTGCAAAG GACACTGAGAGTTATGAGAGAAATTATAAGCCTCTGGTAGATAACATGATCAAGAACGAT TTAGCCCTGAAAGGAAATCTCGATAACGTTGACCTTTTGATTTTTGCATCCAACCAGCTT CCTTCGAATTGCCAGCGCTGGAACATGTTATATTTCCTTTGGGGTGTCTTCCAAGGAAGA AAAGAGACTAACCCACAAAAGAACACATCTTTGCCTACTTCAAATGTTTTGCCGCGTGAC AGAGACCCCAAGGAGCTGTGTCAAACGAGTTCTCCTTCCAAGCATTTGGAGAAAGGGTCT TCTCTACGTGAGAGCTCCAGCAACGGAATTGAAACACGGAATGGGACAGATGCACGTAGT CATGAGAATCCAAATAACAGGGAATCCTCTATTGAGCGATCACCGAGCAAAAAGGAGGAT ATTGCTCTTAAAGTGGAAGAAGCAGGTGTGAATCACATCCCCCCTCAAGTTACTGGATCA AATTCTGGAGATAGTCTAGTGAGGAAGGTTCAGAAAGTCGAGGAACAAGAATTAGGTGGT AGGAAGGATCTGCCATTGACGGTCATGGGCTCAGGGATCCAGTCCCATGGGCAAGATAAT CCTCTAGAGAAAGATCTCAACAGTAGTCAGGCTAGTCACAGGAAGCGTCCACTTTGGGAA CTGAGTAACCCCGCTAACGAGAATTCATCTGCCATAAACCAGAAAGTGGAGCTCAATAAT GACGGTTTATGCGAAGGATCTCCGAATAAGAAGCTGAAGACAGAAAACGGAAGCAGCAGC CTCTGCCGGGATACATCTGGTCACGATTCCGGGATAATGAAAAAGAGTCCAAAAGTCGTG TTCCCATTGGACTTGAATGACGACAGTGAAATGGTGGATAATCTCAGCCCACTAGGCAAT GACGAGAATAACAACAATAGACGTTTAATAAGCGGTACAGTCCCGAATCTGGAGCTGGCA TTAGGAGCTGAGGAAACAACAGAAGCAACAATGGGACTATTACCTTTCTTAAGCAGAAGT AGCAACTCTGGTGAACAAAGTAATAATAGTATGAATAAAGAAAAACAGAAAGCAGATGAA GAAGAAGAAGATGACGCCGAAGTGGCAGCTTCTCTGTCGTTATCACTCTCATTTCCGGGA ACTGAGGAGAGGAAGAATGTGAATACTCCGTTGTTCCTGTTCAGAGACCTTCCCAGATAA AAAGTTAAGTTATTATCGCAAGTTTTTTCTTTAAAATATATTTTGAGTGTCTTTAGTTGT CTTATGGTTGGTGAAGACTCCAACGAGATAAAATCACAGGTTTTGTATATAAAAATGGTG ATGGGATTAAAAAAAGAAGAAAGGATACCGAATGTTTTTAAAATAATAACTGGTTTGATA TATGATATCTATAGAAGAACAAAAGAGTGATCTGATTTCATCTGTCTCCACTTCTCTATA GTTGATTACAATCTGGTTAACATGTGATATTATTTGAAGAAATTTGTTCATCCAAGTAGT AATCAA