Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G16620.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:5450808-5454256 FORWARD LENGTH=1344 \| 201606
Sequence	ATGGAGAACCTTACCCTAGTTTCTTGCTCAGCTTCTTCTCCAAAGCTGTTAATTGGATGC AATTTCACTTCCTCGCTGAAAAACCCTACTGGGTTTTCTCGTCGGACTCCTAATATTGTC CTCCGGTGTTCCAAAATATCTGCCTCTGCTCAATCTCAATCTCCCTCTTCGCGTCCGGAG AACACTGGAGAAATCGTGGTTGTGAAACAGAGAAGCAAAGCTTTTGCAAGTATATTTTCT TCGAGTCGTGATCAACAGACAACTTCTGTTGCTTCCCCTAGTGTGCCTGTGCCACCACCA TCTTCATCAACCATAGGATCACCACTTTTCTGGATTGGTGTTGGTGTTGGTCTATCAGCT TTGTTCTCATATGTAACTTCAAATTTAAAGAAATATGCAATGCAAACAGCTATGAAGACG ATGATGAACCAAATGAATACGCAAAATAGCCAGTTTAATAATTCTGGATTCCCATCAGGA TCACCTTTTCCGTTTCCATTTCCTCCTCAAACAAGTCCTGCTTCCTCGCCATTCCAATCT CAATCCCAGTCTTCAGGTGCTACCGTTGATGTGACAGCGACAAAAGTAGAGACACCTCCT TCAACTAAACCGAAACCTACACCTGCAAAGGATATAGAGGTGGATAAGCCAAGTGTTGTC TTAGAGGCAAGCAAAGAGAAGAAAGAAGAAAAGAACTATGCCTTTGAAGACATTTCACCC GAGGAAACCACAAAAGAAAGCCCATTTAGCAACTATGCAGAAGTCTCTGAAACTAATTCC CCCAAAGAAACTCGCTTGTTTGAGGATGTCTTGCAAAATGGAGCTGGTCCGGCAAATGGT GCCACTGCTTCAGAGGTTTTTCAATCTTTGGGTGGTGGGAAAGGAGGGCCGGGTTTATCT GTAGAAGCTTTAGAGAAAATGATGGAAGATCCAACAGTCCAGAAGATGGTTTACCCATAC TTGCCTGAGGAGATGAGGAACCCAGAAACTTTCAAATGGATGCTTAAAAATCCTCAGTAC CGTCAACAACTACAGGACATGTTGAATAATATGAGTGGGAGTGGTGAATGGGACAAGCGA ATGACAGATACATTGAAGAATTTTGACCTGAATAGTCCTGAAGTGAAGCAACAATTCAAT CAAATAGGACTAACTCCAGAAGAAGTCATATCTAAGATCATGGAGAACCCTGATGTTGCC ATGGCATTCCAGAATCCTAGAGTCCAAGCAGCGTTAATGGAATGCTCAGAGAACCCAATG AACATCATGAAGTACCAAAACGACAAAGAGGTAATGGATGTGTTCAACAAGATATCGCAG CTCTTCCCAGGAATGACGGGTTGA

Peptide Sequence

PEP ID	AT5G16620.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:5450808-5454256 FORWARD LENGTH=447 \| 201606
Sequence	MENLTLVSCSASSPKLLIGCNFTSSLKNPTGFSRRTPNIVLRCSKISASAQSQSPSSRPE NTGEIVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLSA LFSYVTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQS QSQSSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISP EETTKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLS VEALEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKR MTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPM NIMKYQNDKEVMDVFNKISQLFPGMTG

Transcript Sequence

Transcript ID	AT5G16620.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:5450620-5454577 FORWARD LENGTH=1853 \| 201606
Sequence	AAAAAGGTTTCAGTACACTTAGCTACACTGGATCCAAGTCTAGTGCTAAACTCAAACCTC GTGGTTTTAGACCAAAATCTCTTCTTCTTCGTTTCCTTCTTCCTCATCATATCTTTCATC TTCTCCACCAGAATTTGTTTTAGGCTCTCCTTCTTCTGTTTCTTTTTCTCCCAAAGAAAC AATTAGATATGGAGAACCTTACCCTAGTTTCTTGCTCAGCTTCTTCTCCAAAGCTGTTAA TTGGATGCAATTTCACTTCCTCGCTGAAAAACCCTACTGGGTTTTCTCGTCGGACTCCTA ATATTGTCCTCCGGTGTTCCAAAATATCTGCCTCTGCTCAATCTCAATCTCCCTCTTCGC GTCCGGAGAACACTGGAGAAATCGTGGTTGTGAAACAGAGAAGCAAAGCTTTTGCAAGTA TATTTTCTTCGAGTCGTGATCAACAGACAACTTCTGTTGCTTCCCCTAGTGTGCCTGTGC CACCACCATCTTCATCAACCATAGGATCACCACTTTTCTGGATTGGTGTTGGTGTTGGTC TATCAGCTTTGTTCTCATATGTAACTTCAAATTTAAAGAAATATGCAATGCAAACAGCTA TGAAGACGATGATGAACCAAATGAATACGCAAAATAGCCAGTTTAATAATTCTGGATTCC CATCAGGATCACCTTTTCCGTTTCCATTTCCTCCTCAAACAAGTCCTGCTTCCTCGCCAT TCCAATCTCAATCCCAGTCTTCAGGTGCTACCGTTGATGTGACAGCGACAAAAGTAGAGA CACCTCCTTCAACTAAACCGAAACCTACACCTGCAAAGGATATAGAGGTGGATAAGCCAA GTGTTGTCTTAGAGGCAAGCAAAGAGAAGAAAGAAGAAAAGAACTATGCCTTTGAAGACA TTTCACCCGAGGAAACCACAAAAGAAAGCCCATTTAGCAACTATGCAGAAGTCTCTGAAA CTAATTCCCCCAAAGAAACTCGCTTGTTTGAGGATGTCTTGCAAAATGGAGCTGGTCCGG CAAATGGTGCCACTGCTTCAGAGGTTTTTCAATCTTTGGGTGGTGGGAAAGGAGGGCCGG GTTTATCTGTAGAAGCTTTAGAGAAAATGATGGAAGATCCAACAGTCCAGAAGATGGTTT ACCCATACTTGCCTGAGGAGATGAGGAACCCAGAAACTTTCAAATGGATGCTTAAAAATC CTCAGTACCGTCAACAACTACAGGACATGTTGAATAATATGAGTGGGAGTGGTGAATGGG ACAAGCGAATGACAGATACATTGAAGAATTTTGACCTGAATAGTCCTGAAGTGAAGCAAC AATTCAATCAAATAGGACTAACTCCAGAAGAAGTCATATCTAAGATCATGGAGAACCCTG ATGTTGCCATGGCATTCCAGAATCCTAGAGTCCAAGCAGCGTTAATGGAATGCTCAGAGA ACCCAATGAACATCATGAAGTACCAAAACGACAAAGAGGTAATGGATGTGTTCAACAAGA TATCGCAGCTCTTCCCAGGAATGACGGGTTGAAAAAGCTCACGTCTTTGGTTCTATCAAA AATGTCACATTGTCTTTAGCTTTTTGTAGGGAGAAAAAAATGTTTTTTTTTTTGCAAAGA GTCTTCAGTTTTGGTCAGATCAGAGAATTGTGTACCATGTTAATCTTAAACGCGGTCGGG AATTGGAGTCGTGTGAAAACGCCGCTGCTGTTGTTTGGTATGAATATTATACAATAGAAT TTGTTGTCTTACCAAAAAAAGTCTATGAAGACACTGAAGAGCAAATTATTATTTTTAAGG GAAAATTTCCAAAATAAACTTCATGTATTCAAAATTTGCTTGAAAAAACCTCA