Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G16440.1
CDS Infomation	\| isopentenyl diphosphate isomerase 1 \| Chr5:5371765-5373575 FORWARD LENGTH=876 \| 201606
Sequence	ATGTCTACTGCTTCACTATTTAGCTTCCCTTCATTTCATCTCAGATCCCTCCTTCCTTCT CTCTCTTCTTCTTCTTCTTCTTCCTCTTCCCGATTTGCCCCTCCCCGTCTTTCTCCGATC CGATCTCCGGCGCCGAGGACTCAGCTGTCTGTTCGCGCTTTCTCAGCCGTCACCATGACC GATTCTAACGATGCTGGAATGGATGCTGTTCAGAGACGACTCATGTTTGAAGACGAATGC ATTCTCGTTGATGAAAATGATCGTGTGGTGGGACATGACACTAAGTATAACTGTCATCTG ATGGAAAAGATTGAAGCTGAGAATTTACTTCACAGAGCTTTCAGTGTGTTTTTATTCAAC TCCAAGTATGAGTTGCTTCTCCAGCAACGGTCAAAAACAAAGGTTACTTTCCCACTTGTG TGGACAAACACTTGTTGCAGCCATCCTCTTTACCGTGAATCCGAGCTTATTGAAGAGAAT GTGCTTGGTGTAAGAAATGCCGCACAAAGGAAGCTTTTCGATGAGCTCGGTATTGTAGCA GAAGATGTACCAGTCGATGAGTTCACTCCCTTGGGACGCATGCTTTACAAGGCACCTTCT GATGGGAAATGGGGAGAGCACGAAGTTGACTATCTACTCTTCATCGTGCGGGATGTGAAG CTTCAACCAAACCCAGATGAAGTGGCTGAGATCAAGTACGTGAGCAGGGAAGAGCTTAAG GAGCTGGTGAAGAAAGCAGATGCTGGCGATGAAGCTGTGAAACTATCTCCATGGTTCAGA TTGGTGGTGGATAATTTCTTGATGAAGTGGTGGGATCATGTTGAGAAAGGAACTATCACT GAAGCTGCAGACATGAAAACCATTCACAAGCTCTGA

Peptide Sequence

PEP ID	AT5G16440.1
PEP Infomation	\| isopentenyl diphosphate isomerase 1 \| Chr5:5371765-5373575 FORWARD LENGTH=291 \| 201606
Sequence	MSTASLFSFPSFHLRSLLPSLSSSSSSSSSRFAPPRLSPIRSPAPRTQLSVRAFSAVTMT DSNDAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFN SKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVA EDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELK ELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL

Transcript Sequence

Transcript ID	AT5G16440.1
Transcript Infomation	\| isopentenyl diphosphate isomerase 1 \| Chr5:5371627-5373809 FORWARD LENGTH=1248 \| 201606
Sequence	GAATAAAAATTCAAATAATCGTGCGAAAATTAACCTAGTTCATATTTATTTTCTTTTAAT TTTCTCTTCTGTATATTTATAGGTTGGTCTAATTATTGAAAAAATCAAAAATAAAGAGAA ACAAAGACGTAATCCAAAATGTCTACTGCTTCACTATTTAGCTTCCCTTCATTTCATCTC AGATCCCTCCTTCCTTCTCTCTCTTCTTCTTCTTCTTCTTCCTCTTCCCGATTTGCCCCT CCCCGTCTTTCTCCGATCCGATCTCCGGCGCCGAGGACTCAGCTGTCTGTTCGCGCTTTC TCAGCCGTCACCATGACCGATTCTAACGATGCTGGAATGGATGCTGTTCAGAGACGACTC ATGTTTGAAGACGAATGCATTCTCGTTGATGAAAATGATCGTGTGGTGGGACATGACACT AAGTATAACTGTCATCTGATGGAAAAGATTGAAGCTGAGAATTTACTTCACAGAGCTTTC AGTGTGTTTTTATTCAACTCCAAGTATGAGTTGCTTCTCCAGCAACGGTCAAAAACAAAG GTTACTTTCCCACTTGTGTGGACAAACACTTGTTGCAGCCATCCTCTTTACCGTGAATCC GAGCTTATTGAAGAGAATGTGCTTGGTGTAAGAAATGCCGCACAAAGGAAGCTTTTCGAT GAGCTCGGTATTGTAGCAGAAGATGTACCAGTCGATGAGTTCACTCCCTTGGGACGCATG CTTTACAAGGCACCTTCTGATGGGAAATGGGGAGAGCACGAAGTTGACTATCTACTCTTC ATCGTGCGGGATGTGAAGCTTCAACCAAACCCAGATGAAGTGGCTGAGATCAAGTACGTG AGCAGGGAAGAGCTTAAGGAGCTGGTGAAGAAAGCAGATGCTGGCGATGAAGCTGTGAAA CTATCTCCATGGTTCAGATTGGTGGTGGATAATTTCTTGATGAAGTGGTGGGATCATGTT GAGAAAGGAACTATCACTGAAGCTGCAGACATGAAAACCATTCACAAGCTCTGAACTTTC CATAAGTTTTGGATCTTCCCCTTCCCATAATAAAATTAAGAGATGAGACTTTTATTGATT ACAGACAAAACTGGCAACAAAATCTATTCCTAGGATTTTTTTTTGCTTTTTATTTACTTT TGATTCATCTCTAGTTTAGTTTTCATCTTTTGTTACTTCTTCAGTTACAACTTACAAAAG CAAAGACAGAACATAACACATAAACACACGTTGAAAACGGAACATAAA