Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G16260.1
CDS Infomation	\| RNA binding (RRM/RBD/RNP motifs) family protein \| Chr5:5311363-5315496 FORWARD LENGTH=1560 \| 201606
Sequence	ATGTCAGACTCTGATAATCTACAGCTTCCACCATCATCGACAGGGGCAACAGTTGCAGCT ACTGATGTTGGTTGGTACATTCTTGGTGAAAATCAGCAGAACCTGGGCCCTTATACTTTC TCTGAGCTATGTAACCATTTCAGGAATGGTTACCTACTAGAAACTACTCTAGTCTGGGCT GACGGAAGAAGCGAATGGCAGCCACTTTCTGCCATCCCCGATTTAATGTCAAGGATATCC GGAGCTGAGATTGCCTATCCAGCTGTAGGTTCATCTGGGTTGATAAATGGATCTAATGCT GGAACCAGGCAAGAGAAGCAAGATTATACTGCCTCTGCTAGTACTGAGGATGAATTTGAG AAATGGCAGAGAGAGATTAAAGACGCAGAAGCAGAGGCTGAAAGGTTGAAAAATGGTTCT GTCTCTGGTACTGAGCTTGTTGAAGATGATCATGAAAGGGCATCTTCACCACCTGAGGGC GAAGATGAGTTCACAGATGATGATGGAACAAAATATAAATGGGACAGAGCTCGTAGAGTA TGGGTTCCTCAGGACGATCCACCACTGGGTAGCGTTGACCCGTATGGACTCGAAGAGATG ACCTTTGCTAAGGAAGACGAAGTATTTCCAACAATTAACATTCTTGATACTTCTGTTGAT AAGAAGGATGCCTCTAAGGATGACGTGGCTGGTAAGAAAGAAGAAGATGGCTCTGATGAA ACCGCTGAAATAAACAGTAACGGCAAGAGAAAGCTACCAGAGCCAGAAACTGAAAAGAAG GAACCAAACAAGCCTCCAGATTCGTGGTTTGAGTTAAAAGTAAACCCACATATTTATGTT AATGGGTTGCCCGATGATGTCACCATCGAGGAAGTAGCTGAAGTTTTTTCTAAGTGCGGT ATAATTAAGGAGGATGACACTGGCAAGCCTCGCATAAAGCTATACAGTGACAAGGCGACA GGAAAATTAAAAGGCGATGCTCTTATCTCCTATATGAAGGAGCCCTCAGTGGATCTGGCA ATTAAAATCTTAGACGGGGCTCCGTTACGTCCTGCTGATAAGCTCCTCATGTCAGTTTCT CGAGCTAAGTTCGAGCAGAAAGGGGAGAGATTTATAACTAAGCAAACCGACAACAAGAAG AAAAAGAAGCTTAAAAAGGTCGAGCAAAAGTTGCTTGGATGGGGTGGTACAGATGATTCT AAGGTCTCAATACCTGCAACGGTTGTTCTGCGCTACATGTTCAGTCCAGCTGAGTTGATG GCTGATGAGGATCTGGTTGCTGAGTTAGAGGAAGACGTGAAAGAGGAGAGTTTGAAGCAT GGACCGTTCGACTCAGTGAAGGTATGTGAGCATCATCCACAGGGTGTTGTTCTTGTAAGA TTCAAGGATCGGAGAGATGCACAGAAATGTATAGAAGCAATGAACGGTCGATGGTATGCA AAGAGACAGATACATGCGAGCCTCGATGATGGATCAGTGAACCATGCTACAGTTAGGGAT TTTGATTTGGAAGCGGAACGGTTAGATCAGTTTGCAGCTGAACTGGAAGCTGCTGAGTAA

Peptide Sequence

PEP ID	AT5G16260.1
PEP Infomation	\| RNA binding (RRM/RBD/RNP motifs) family protein \| Chr5:5311363-5315496 FORWARD LENGTH=519 \| 201606
Sequence	MSDSDNLQLPPSSTGATVAATDVGWYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWA DGRSEWQPLSAIPDLMSRISGAEIAYPAVGSSGLINGSNAGTRQEKQDYTASASTEDEFE KWQREIKDAEAEAERLKNGSVSGTELVEDDHERASSPPEGEDEFTDDDGTKYKWDRARRV WVPQDDPPLGSVDPYGLEEMTFAKEDEVFPTINILDTSVDKKDASKDDVAGKKEEDGSDE TAEINSNGKRKLPEPETEKKEPNKPPDSWFELKVNPHIYVNGLPDDVTIEEVAEVFSKCG IIKEDDTGKPRIKLYSDKATGKLKGDALISYMKEPSVDLAIKILDGAPLRPADKLLMSVS RAKFEQKGERFITKQTDNKKKKKLKKVEQKLLGWGGTDDSKVSIPATVVLRYMFSPAELM ADEDLVAELEEDVKEESLKHGPFDSVKVCEHHPQGVVLVRFKDRRDAQKCIEAMNGRWYA KRQIHASLDDGSVNHATVRDFDLEAERLDQFAAELEAAE

Transcript Sequence

Transcript ID	AT5G16260.1
Transcript Infomation	\| RNA binding (RRM/RBD/RNP motifs) family protein \| Chr5:5311141-5315834 FORWARD LENGTH=2120 \| 201606
Sequence	GTAATAACTATAGTGGGGCCTAATGGGCCGTGTATTTGATTCATGTTTATCCGAGACAAG GATACGATTACTCTATATCCAAACAAGGTCAGGGTCCTCTACCGTCTTCCTCCTGCTTCC GCCATTCTTCGGACTTTTCGTCGTCGTCTCTCGAACGCGTCACTCTTATAGTCGGTTTTG TCGTTGTCAGTAATTTGCGATTTTTGAAGGTTAACGAGAAAAATGTCAGACTCTGATAAT CTACAGCTTCCACCATCATCGACAGGGGCAACAGTTGCAGCTACTGATGTTGGTTGGTAC ATTCTTGGTGAAAATCAGCAGAACCTGGGCCCTTATACTTTCTCTGAGCTATGTAACCAT TTCAGGAATGGTTACCTACTAGAAACTACTCTAGTCTGGGCTGACGGAAGAAGCGAATGG CAGCCACTTTCTGCCATCCCCGATTTAATGTCAAGGATATCCGGAGCTGAGATTGCCTAT CCAGCTGTAGGTTCATCTGGGTTGATAAATGGATCTAATGCTGGAACCAGGCAAGAGAAG CAAGATTATACTGCCTCTGCTAGTACTGAGGATGAATTTGAGAAATGGCAGAGAGAGATT AAAGACGCAGAAGCAGAGGCTGAAAGGTTGAAAAATGGTTCTGTCTCTGGTACTGAGCTT GTTGAAGATGATCATGAAAGGGCATCTTCACCACCTGAGGGCGAAGATGAGTTCACAGAT GATGATGGAACAAAATATAAATGGGACAGAGCTCGTAGAGTATGGGTTCCTCAGGACGAT CCACCACTGGGTAGCGTTGACCCGTATGGACTCGAAGAGATGACCTTTGCTAAGGAAGAC GAAGTATTTCCAACAATTAACATTCTTGATACTTCTGTTGATAAGAAGGATGCCTCTAAG GATGACGTGGCTGGTAAGAAAGAAGAAGATGGCTCTGATGAAACCGCTGAAATAAACAGT AACGGCAAGAGAAAGCTACCAGAGCCAGAAACTGAAAAGAAGGAACCAAACAAGCCTCCA GATTCGTGGTTTGAGTTAAAAGTAAACCCACATATTTATGTTAATGGGTTGCCCGATGAT GTCACCATCGAGGAAGTAGCTGAAGTTTTTTCTAAGTGCGGTATAATTAAGGAGGATGAC ACTGGCAAGCCTCGCATAAAGCTATACAGTGACAAGGCGACAGGAAAATTAAAAGGCGAT GCTCTTATCTCCTATATGAAGGAGCCCTCAGTGGATCTGGCAATTAAAATCTTAGACGGG GCTCCGTTACGTCCTGCTGATAAGCTCCTCATGTCAGTTTCTCGAGCTAAGTTCGAGCAG AAAGGGGAGAGATTTATAACTAAGCAAACCGACAACAAGAAGAAAAAGAAGCTTAAAAAG GTCGAGCAAAAGTTGCTTGGATGGGGTGGTACAGATGATTCTAAGGTCTCAATACCTGCA ACGGTTGTTCTGCGCTACATGTTCAGTCCAGCTGAGTTGATGGCTGATGAGGATCTGGTT GCTGAGTTAGAGGAAGACGTGAAAGAGGAGAGTTTGAAGCATGGACCGTTCGACTCAGTG AAGGTATGTGAGCATCATCCACAGGGTGTTGTTCTTGTAAGATTCAAGGATCGGAGAGAT GCACAGAAATGTATAGAAGCAATGAACGGTCGATGGTATGCAAAGAGACAGATACATGCG AGCCTCGATGATGGATCAGTGAACCATGCTACAGTTAGGGATTTTGATTTGGAAGCGGAA CGGTTAGATCAGTTTGCAGCTGAACTGGAAGCTGCTGAGTAAAAAACAAAAGCACAATGA TCTAAAGCTGGGAAGATTTGGATTATTATTCTGGGAAACTCAGGTTTCTGATGTAAATCA CTAGGCACAGACACATCTGAATCAGACCAACGCAAACCCAGAGGACCGGTTTTATCTAGT ACTAGTAGTATTACCTGTAGTGAAATTAACGAATAAGACTGCACTTGCAAGTGTATTTTG ATATTCGTTGACTAAAAACCTTTACTACTATGTAATACGATTTTCTTCTAGAAATTTGAA AAATCGGAATTTAAAAGTTATGCTTCACTATATTTTTTCCTTATTTGTTAAATCATGATA CTTAGCAGTTTTTGTGTGAC