Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G15980.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:5213290-5215296 FORWARD LENGTH=2007 \| 201606
Sequence	ATGAGATATCAACAATGGCGATTGATGCTTCTTCGAAGCTACCATCGTTCTCATCTTCCT TATCTATCTCCTTGTTCTCAGGTAACCTCCATTTCATCGCGATCTTTCTCTTCTTTCATT CACCCTGGGATCGGAGCTTTGCAACAAAGTGAACAACTTTGTCCCTTACGATCCCCAATG ACGAGCTCTGGCAACTTAGTGAAATCAGTGGGTCGAAGCTTCTCGTCCGAGCCTGCGGTT GAAGAGAAATCTTCTGCTGAGGCTACCGTGATTGATATTTTTAGTAGATTGAGTGGTGAG GATGAGATTAGGAAGGAGTTGGAATCGAGTGGTGTAGTGATTAGCCAAGATTTAGCTTTG AAGGTTTTGAGAAAGCTCGAATCAAACCCTGATGTTGCCAAAAGTTTTTTCCAGTGGATT AAGGAGGCTTCTCCTGAGGAACTTAGCTCGAAGAACTATAACATGATGCTGCGGATTCTG GGTGGTAATGGACTTGTTGATGAGTTTTGGGGGTTGGTTGATGTGATGAAGAAGAAAGGG CATGGTTTATCGGCTAATGTTAGAGATAAAGTGGGTGACAAATTTCAGAAAGATGGGCTG GAGAGTGATTTGCTGAGGCTGAGAAAGCTTTTTACTTCAGATTGTTTAGATAATTCGGCG GAGAATGTTTGCGATAGGGTGTGTAAGATTGTGATGAAGGAAGAATGGGGTGATGATGTA GAGAAACGGGTAAGAGATTTGAATGTTGAGTTTAAGAGTGATTTAGTGAAGATGATTGTG GAACGTCTTGATGTTGAACCCAGGAAAGCTTTGTTGTTCTTCCGGTGGATTGATGAGTCT GATCTCTTTAAGCATGATGAGAAAACCTATAATGCTATGGCTAGGGTTTTGGGAAAAGAG AAGTTTCTTGATAGATTTCAGAACATTGTAGTAGAAATGAGGAGTGCTGGTTATGAAGTG GAAATAGAGACTTATGTTAGAGTTTCAACGAGGTTCTGCCAGACTAAATTGATCAAGGAA GCTGTTGACTTGTTTGAGATTGCAATGGCAGGTAGTAGTAGTAGTAACAACCCCACCCCA CACTGCTTCTGTTTGTTGCTCAAGAAAATTGTCACTGCCAAGATTCTAGATATGGATTTG TTTTCAAGAGCTGTGAAAGTTTATACCAAAAATGGTAATGCTTTGACGGATTCCTTGCTG AAATCTGTCTTAAAGTCCTTGAGAAGCGTGGATAGGGTTGAACAGAGCAATGAGCTGTTG AAAGAAATGAAGAGAGGAGGCTATGTTCCTAGTGGTGATATGCAGAGCATGATTGCATCA AGTCTTAGTCGTAAGGGAAAGAAGGACGAAGCTGATGAATTTGTAGACTTTATGGAATCA TCCGGAAACAATCTAGATGACAAGGCAATGGCGTCTCTTGTTGAAGGGTATTGTGATTCC GGGAATCTTGATGAAGCTTTAGTGTGTTTCGAGAAAATGGTTGGAAACACGGGAGTCTCC TATGCTGATTATTCATTTGAGAAGTTGGTTCTTGCTTATTGCAACAAGAATCAAGTAAGA GATGCATACAAGCTTTTGAGTGCACAAGTAACGAAAAATCAACTGAAACCTCGTCATAGC ACATACAAAAGCTTGGTGACGAATCTGTTGACGAAGAAGATTGCAAGGGATGGTGGGTTT GAAGAAGCTTTGAGTCTTCTACCGATAATGAAAGATCACGGGTTCCCTCCTTTCATTGAC CCTTTCATGAGTTACTTCTCATCAACTGGAAAAAGCACTGAAGCTCTCGGTTTTTTGAAG GCTATGACCTCGAATAACTTTCCATATATATCAGTGGTTCTGCGTGTATTCGAAACTATG ATGAAGTCTGCAAGACACAGTGAAGCACAAGATTTACTCTCTCTGTGCCCAAACTATATC CGTAATAATCCGGATGTTCTAGAACTCTTCAATACCATGAAACCCAACGAATCTGCTGTA GAAAAACCTTTGGCTGCTTCTGCTTAG

Peptide Sequence

PEP ID	AT5G15980.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:5213290-5215296 FORWARD LENGTH=668 \| 201606
Sequence	MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLRSPM TSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLAL KVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKG HGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDV EKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKE KFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTP HCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELL KEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDS GNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHS TYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLK AMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESAV EKPLAASA

Transcript Sequence

Transcript ID	AT5G15980.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:5213062-5215674 FORWARD LENGTH=2613 \| 201606
Sequence	CTCTGCGTCATTGTGATGGGACCTTCTCTTTGCCTTAGATGGTTTCGTTTACCTCAAAAA GTCAAAAATCAAAATCCTCACTAAAACCCTAACATTTCCCAGAGCTTCGCAATCGCTGTT CTTCAGTCTCGCTTCTTTGTAAACTGTAAAGGATCAAGCTTTTCTATTCAGATCAAATCC ACTTCACTATACCCTTTTTTAGTTTCGTTAACCCAGCTCAAATCCGAGATGAGATATCAA CAATGGCGATTGATGCTTCTTCGAAGCTACCATCGTTCTCATCTTCCTTATCTATCTCCT TGTTCTCAGGTAACCTCCATTTCATCGCGATCTTTCTCTTCTTTCATTCACCCTGGGATC GGAGCTTTGCAACAAAGTGAACAACTTTGTCCCTTACGATCCCCAATGACGAGCTCTGGC AACTTAGTGAAATCAGTGGGTCGAAGCTTCTCGTCCGAGCCTGCGGTTGAAGAGAAATCT TCTGCTGAGGCTACCGTGATTGATATTTTTAGTAGATTGAGTGGTGAGGATGAGATTAGG AAGGAGTTGGAATCGAGTGGTGTAGTGATTAGCCAAGATTTAGCTTTGAAGGTTTTGAGA AAGCTCGAATCAAACCCTGATGTTGCCAAAAGTTTTTTCCAGTGGATTAAGGAGGCTTCT CCTGAGGAACTTAGCTCGAAGAACTATAACATGATGCTGCGGATTCTGGGTGGTAATGGA CTTGTTGATGAGTTTTGGGGGTTGGTTGATGTGATGAAGAAGAAAGGGCATGGTTTATCG GCTAATGTTAGAGATAAAGTGGGTGACAAATTTCAGAAAGATGGGCTGGAGAGTGATTTG CTGAGGCTGAGAAAGCTTTTTACTTCAGATTGTTTAGATAATTCGGCGGAGAATGTTTGC GATAGGGTGTGTAAGATTGTGATGAAGGAAGAATGGGGTGATGATGTAGAGAAACGGGTA AGAGATTTGAATGTTGAGTTTAAGAGTGATTTAGTGAAGATGATTGTGGAACGTCTTGAT GTTGAACCCAGGAAAGCTTTGTTGTTCTTCCGGTGGATTGATGAGTCTGATCTCTTTAAG CATGATGAGAAAACCTATAATGCTATGGCTAGGGTTTTGGGAAAAGAGAAGTTTCTTGAT AGATTTCAGAACATTGTAGTAGAAATGAGGAGTGCTGGTTATGAAGTGGAAATAGAGACT TATGTTAGAGTTTCAACGAGGTTCTGCCAGACTAAATTGATCAAGGAAGCTGTTGACTTG TTTGAGATTGCAATGGCAGGTAGTAGTAGTAGTAACAACCCCACCCCACACTGCTTCTGT TTGTTGCTCAAGAAAATTGTCACTGCCAAGATTCTAGATATGGATTTGTTTTCAAGAGCT GTGAAAGTTTATACCAAAAATGGTAATGCTTTGACGGATTCCTTGCTGAAATCTGTCTTA AAGTCCTTGAGAAGCGTGGATAGGGTTGAACAGAGCAATGAGCTGTTGAAAGAAATGAAG AGAGGAGGCTATGTTCCTAGTGGTGATATGCAGAGCATGATTGCATCAAGTCTTAGTCGT AAGGGAAAGAAGGACGAAGCTGATGAATTTGTAGACTTTATGGAATCATCCGGAAACAAT CTAGATGACAAGGCAATGGCGTCTCTTGTTGAAGGGTATTGTGATTCCGGGAATCTTGAT GAAGCTTTAGTGTGTTTCGAGAAAATGGTTGGAAACACGGGAGTCTCCTATGCTGATTAT TCATTTGAGAAGTTGGTTCTTGCTTATTGCAACAAGAATCAAGTAAGAGATGCATACAAG CTTTTGAGTGCACAAGTAACGAAAAATCAACTGAAACCTCGTCATAGCACATACAAAAGC TTGGTGACGAATCTGTTGACGAAGAAGATTGCAAGGGATGGTGGGTTTGAAGAAGCTTTG AGTCTTCTACCGATAATGAAAGATCACGGGTTCCCTCCTTTCATTGACCCTTTCATGAGT TACTTCTCATCAACTGGAAAAAGCACTGAAGCTCTCGGTTTTTTGAAGGCTATGACCTCG AATAACTTTCCATATATATCAGTGGTTCTGCGTGTATTCGAAACTATGATGAAGTCTGCA AGACACAGTGAAGCACAAGATTTACTCTCTCTGTGCCCAAACTATATCCGTAATAATCCG GATGTTCTAGAACTCTTCAATACCATGAAACCCAACGAATCTGCTGTAGAAAAACCTTTG GCTGCTTCTGCTTAGCTCCAGTTTTAGTTTACATTCCTTCAAGTCTTTTTGGTTTCTGGG CATTTGATTCAAATAATTTGGCCAGAATATTTCCTGCTGTTCCCTTTTGTTTACATGTAT CACTCACCAGTCACCAGTTAACTTTCTTCATCAACCTGGTGCACTGGCAAAATAATTTTA AGGTACTATGTTTTTTTATATTCCACTTGCTTATCATCTTATGCTTCTTGGCTCTGCCAT GGATTGTTCCGTGTATCATCATTATTTGTTAACAAGATCTGTCTGTAACTCTGTTCTCTT TTTAACTTTTTCTCCGCACTAATGTATTGCCTATTGATCAGATACTAGTGCTTGACATTA CCAAATATCAAATTGGAAGATCTTTGATGTTGA