Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G15920.1
CDS Infomation	\| structural maintenance of chromosomes 5 \| Chr5:5196210-5199559 FORWARD LENGTH=3162 \| 201606
Sequence	ATGTCTGAACGTCGTGCTAAGCGTCCTAAAATCTCCAGAGGAGAAGATGACTTTTTGCCT GGGAATATAATCGAAATCGAGCTTCACAACTTCATGACATTCAATCACTTGGTATGCAAA CCTGGATCACGTTTGAACCTTGTTATTGGACCTAACGGATCAGGTAAGAGTTCTCTTGTC TGTGCCATTGCACTCTGTCTTGGTGGTGAGCCTCAGCTTCTTGGGAGAGCTACTAGTGTT GGAGCATATGTTAAGCGTGGGGAAGATTCTGGCTATGTCAAGATCTCTTTGAGAGGTAAC ACCAGGGAAGAAAATCTTACGATTTTTCGTAAGATCGATACACGTAACAAGTCTGAGTGG ATGTTTAATGGAAGCACAGTTAGTAAGAAAGATATTGTGGAGATAATACAGAAATTCAAC ATTCAAGTTAACAATCTCACGCAGTTCCTGCCACAAGATAGGGTTTGCGAGTTTGCCAAG TTAACTCCTGTGCAACTCCTGGAGGAGACGGAAAAAGCTGTTGGGGATCCTCAACTGCCA GTCCATCATCGCGCGCTAGTTGAGAAAAGCCGTGATCTGAAGCAGCTTGAGAGAGCTGTG GCGAAAAATGGAGAGACGCTGAATCAGCTTAAAGCTCTTGTTGATGAGCAAGAGAAGGAC GTGGAGCGTGTTAGGCAGAGAGAGTTGTTTTTGACTAAGGTTGATTCCATGAAGAAGAAA TTGCCATGGCTAAAGTATGATATGAAAAAAGCTGAGTACATGGATGCTAAGAAGAGAATG AAGGAAGCCGAGAAAAAATTGGATGAAGCTGCAAAGAATTTGAACAGCATGAAGGAACCT ATAGAAAAGCAAAAGAAGGAGAAAGCAGAGACAGATTCAAAATGCAAAAAAGTTAAGAAT CTCATGGATGCAAATGGAAGAAACCGTTGTCACTTGCTCGAGAAAGAAGATGAGGCAGAC GCACGTGTAGTGGCAACGTACAAAGAACTGGAGGAATTGAAGAAACAAGAAGAGCATCGT CAAGAAAGGATTCTGAAAGCTACTGAGGATCTCGTTGCTGCGGAACGGGAACTCCAAAAC CTGCCTGTATACGAACGTCCTGTAGCCAAACTTGAAGAATTGAGCTCTCAGGTTACAGAG CTGCATCATAGCATTAACGGAAAGAAGAATCAGAAGGAGGACAACGAGAAGCTTTTGTCT CAGAAGAGATACACCCTGAGGCAATGCGTAGATAAGTTAAAGGACATGGAGAATGCAAAT AACAAACTCTTGAAAGCGTTAGCTAACTCTGGAGCTGATAGGATATTTGACGCATATCAA TGGGTGCAACAGAATCGTCATGAGTTTAAAAGGGAAGTATATGGTCCTGTTTTGGTGGAG GTTAACGTTCCAAATCGAGAGAACGCTTGCTTTTTGGAGGGTCATGTTTCTTTTTATATC TGGAAGTCTTTTATCACTCAGGATCCGGAGGACCGTGATTTGCTGGTTAAAAATTTAAAA CGATTTGATGTTCCTGTTCTAAACTATGTGGGCAATAGCGGCAATCAAAAGGCTCCCTTT CATATTTCTGATCAGATGCGTTCTCTTGGGATCCATGCTCGGCTTGATCAAATATTTGAT GCTCCTGATGCCGTCAAGGAGGTTTTAAATTCCCAGTTTGGTCTGGAGGACTCGTACATT GGATCAAAGATTACCGATCAGAGGGCTGAAGAAGTCTATAAGTTGGGTATTAAAGATTTT TGGACCCCAGACAATCACTACCGGTGGTCTTCCTCAAGATATGGTGGTCATTCCTCTGCA AGTGTAGATTCTGTATATCAATCACGTCTTCTATTATGTGGGGTGGACGTTGGAGAGCTT GAGAAACTGAGATCAAGAAAGGAGGAATTAGAAGACTCTATTTTATTCATGGAGGAAACT CACAAGAGTCTTCAAACAGAGCAAAGACGTTTGGAAGAAGAAGCAGCTAAACTTCATAAA GAGAGGGAGGAGATTGTAAATGTTTCGTATCTGGAGAAGAAAAAACGCCGTGAGTTGGAA TCCCGTTACCAGCAAAGGAAGACAAAGCTGGAATCTTTAGAGCAAGAGGAGGACATGGAT GCTTCAGTTGCTAAGCTGATTGATCAGGCTTCCAGAGCTAACGCTGACCGCTATACATAT GCAATCAATCTCAAGAAATTACTTGTGGAGGCTGTTGCTCATAAGTGGAGTTACGCCGAG AAGCATATGGCTTCTATAGAATTGGAAAGAAAGATCAGAGAGTCGGAAATCAATATCAAA CAATATGAGAAAACGGCACAACAGCTATCTCTCGCCGTTGAGTATTGTAAGAAAGAGGTA GAAGGAAAGCAGCAGCGGCTAGCAACTGCCAAGAGGGATGCAGAATCTGTTGCAACCATC ACACCTGAACTTAAAAAGGAGTTTATGGAGATGCCTACCACAGTCGAAGAATTGGAAGCG GCTATACAAGACAATCTGTCTCAAGCCAATTCGATCCTTTTCATAAACGAGAACATTCTC CAAGAGTATGAACATCGCCAAAGTCAGATATATACCATTTCTACGAAGCTCGAAACTGAT AAAAGAGATCTGAGCATATGCATGAAAGAAATCGATTCGCTAAAGGAGAAATGGCTTCCA ACGTTGAGACAGCTTGTTGGTCAGATAAATGAAACATTCAGCCACAACTTCCAAGAAATG GCTGTTGCAGGAGAAGTTTCATTGGATGAACGTGACACTGACTTTGATCAATACGGAATA CATATCAAAGTGAAATTCAGAGAATCTGGGCAACTTCAGGTTCTAAGCTCTCACCACCAA TCTGGAGGAGAGCGTTCTGTCTCAACTATCCTTTACCTCGTCTCTCTTCAAGATCTGACA AACTGTCCTTTCAGGGTTGTTGATGAGATTAATCAAGGTATGGATCCCATAAATGAAAGG AAGATGTTTCAACAATTGGTTAGAGCTGCTAGTCAACCAAACACACCACAGTGCTTCTTA CTGACCCCAAAACTCTTACCGGAGCTAGAATACAGTGAAGCCTGTAGCATTCTGAACATC ATGAACGGTCCTTATATCGCGGAGCCTTCAAAAGTTTGGAGCTTAGGTGATAGTTGGGGC AGTCTCAATAGACGGAGAACCGAAGCTAGTCAATGTTCCTAA

Peptide Sequence

PEP ID	AT5G15920.1
PEP Infomation	\| structural maintenance of chromosomes 5 \| Chr5:5196210-5199559 FORWARD LENGTH=1053 \| 201606
Sequence	MSERRAKRPKISRGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLV CAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTRNKSEW MFNGSTVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP VHHRALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMKKK LPWLKYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKVKN LMDANGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAERELQN LPVYERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENAN NKLLKALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVSFYI WKSFITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQIFD APDAVKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHSSA SVDSVYQSRLLLCGVDVGELEKLRSRKEELEDSILFMEETHKSLQTEQRRLEEEAAKLHK EREEIVNVSYLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQASRANADRYTY AINLKKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYCKKEV EGKQQRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFINENIL QEYEHRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQEM AVAGEVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLT NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNI MNGPYIAEPSKVWSLGDSWGSLNRRRTEASQCS

Transcript Sequence

Transcript ID	AT5G15920.1
Transcript Infomation	\| structural maintenance of chromosomes 5 \| Chr5:5195593-5199697 FORWARD LENGTH=3507 \| 201606
Sequence	GGTCGTCGTGCTTCTCTTTTCCCGGGTTTTCGCTTTTTCATGGTTTCACTTTCAGCTCTG CAAACAAACTGAAAAATCGCAATTCAGATAGAGTCTAGGGTTTATCCTCGTATGGTTCAA TTCCGCGCTCCATATTTCAATTTCGGCTAAATTCACTTGTTCAGGTTAACTCAGTAAAAA TCTCTGAACCGCTGAGAAACGACAAAGATGTCTGAACGTCGTGCTAAGCGTCCTAAAATC TCCAGAGGAGAAGATGACTTTTTGCCTGGGAATATAATCGAAATCGAGCTTCACAACTTC ATGACATTCAATCACTTGGTATGCAAACCTGGATCACGTTTGAACCTTGTTATTGGACCT AACGGATCAGGTAAGAGTTCTCTTGTCTGTGCCATTGCACTCTGTCTTGGTGGTGAGCCT CAGCTTCTTGGGAGAGCTACTAGTGTTGGAGCATATGTTAAGCGTGGGGAAGATTCTGGC TATGTCAAGATCTCTTTGAGAGGTAACACCAGGGAAGAAAATCTTACGATTTTTCGTAAG ATCGATACACGTAACAAGTCTGAGTGGATGTTTAATGGAAGCACAGTTAGTAAGAAAGAT ATTGTGGAGATAATACAGAAATTCAACATTCAAGTTAACAATCTCACGCAGTTCCTGCCA CAAGATAGGGTTTGCGAGTTTGCCAAGTTAACTCCTGTGCAACTCCTGGAGGAGACGGAA AAAGCTGTTGGGGATCCTCAACTGCCAGTCCATCATCGCGCGCTAGTTGAGAAAAGCCGT GATCTGAAGCAGCTTGAGAGAGCTGTGGCGAAAAATGGAGAGACGCTGAATCAGCTTAAA GCTCTTGTTGATGAGCAAGAGAAGGACGTGGAGCGTGTTAGGCAGAGAGAGTTGTTTTTG ACTAAGGTTGATTCCATGAAGAAGAAATTGCCATGGCTAAAGTATGATATGAAAAAAGCT GAGTACATGGATGCTAAGAAGAGAATGAAGGAAGCCGAGAAAAAATTGGATGAAGCTGCA AAGAATTTGAACAGCATGAAGGAACCTATAGAAAAGCAAAAGAAGGAGAAAGCAGAGACA GATTCAAAATGCAAAAAAGTTAAGAATCTCATGGATGCAAATGGAAGAAACCGTTGTCAC TTGCTCGAGAAAGAAGATGAGGCAGACGCACGTGTAGTGGCAACGTACAAAGAACTGGAG GAATTGAAGAAACAAGAAGAGCATCGTCAAGAAAGGATTCTGAAAGCTACTGAGGATCTC GTTGCTGCGGAACGGGAACTCCAAAACCTGCCTGTATACGAACGTCCTGTAGCCAAACTT GAAGAATTGAGCTCTCAGGTTACAGAGCTGCATCATAGCATTAACGGAAAGAAGAATCAG AAGGAGGACAACGAGAAGCTTTTGTCTCAGAAGAGATACACCCTGAGGCAATGCGTAGAT AAGTTAAAGGACATGGAGAATGCAAATAACAAACTCTTGAAAGCGTTAGCTAACTCTGGA GCTGATAGGATATTTGACGCATATCAATGGGTGCAACAGAATCGTCATGAGTTTAAAAGG GAAGTATATGGTCCTGTTTTGGTGGAGGTTAACGTTCCAAATCGAGAGAACGCTTGCTTT TTGGAGGGTCATGTTTCTTTTTATATCTGGAAGTCTTTTATCACTCAGGATCCGGAGGAC CGTGATTTGCTGGTTAAAAATTTAAAACGATTTGATGTTCCTGTTCTAAACTATGTGGGC AATAGCGGCAATCAAAAGGCTCCCTTTCATATTTCTGATCAGATGCGTTCTCTTGGGATC CATGCTCGGCTTGATCAAATATTTGATGCTCCTGATGCCGTCAAGGAGGTTTTAAATTCC CAGTTTGGTCTGGAGGACTCGTACATTGGATCAAAGATTACCGATCAGAGGGCTGAAGAA GTCTATAAGTTGGGTATTAAAGATTTTTGGACCCCAGACAATCACTACCGGTGGTCTTCC TCAAGATATGGTGGTCATTCCTCTGCAAGTGTAGATTCTGTATATCAATCACGTCTTCTA TTATGTGGGGTGGACGTTGGAGAGCTTGAGAAACTGAGATCAAGAAAGGAGGAATTAGAA GACTCTATTTTATTCATGGAGGAAACTCACAAGAGTCTTCAAACAGAGCAAAGACGTTTG GAAGAAGAAGCAGCTAAACTTCATAAAGAGAGGGAGGAGATTGTAAATGTTTCGTATCTG GAGAAGAAAAAACGCCGTGAGTTGGAATCCCGTTACCAGCAAAGGAAGACAAAGCTGGAA TCTTTAGAGCAAGAGGAGGACATGGATGCTTCAGTTGCTAAGCTGATTGATCAGGCTTCC AGAGCTAACGCTGACCGCTATACATATGCAATCAATCTCAAGAAATTACTTGTGGAGGCT GTTGCTCATAAGTGGAGTTACGCCGAGAAGCATATGGCTTCTATAGAATTGGAAAGAAAG ATCAGAGAGTCGGAAATCAATATCAAACAATATGAGAAAACGGCACAACAGCTATCTCTC GCCGTTGAGTATTGTAAGAAAGAGGTAGAAGGAAAGCAGCAGCGGCTAGCAACTGCCAAG AGGGATGCAGAATCTGTTGCAACCATCACACCTGAACTTAAAAAGGAGTTTATGGAGATG CCTACCACAGTCGAAGAATTGGAAGCGGCTATACAAGACAATCTGTCTCAAGCCAATTCG ATCCTTTTCATAAACGAGAACATTCTCCAAGAGTATGAACATCGCCAAAGTCAGATATAT ACCATTTCTACGAAGCTCGAAACTGATAAAAGAGATCTGAGCATATGCATGAAAGAAATC GATTCGCTAAAGGAGAAATGGCTTCCAACGTTGAGACAGCTTGTTGGTCAGATAAATGAA ACATTCAGCCACAACTTCCAAGAAATGGCTGTTGCAGGAGAAGTTTCATTGGATGAACGT GACACTGACTTTGATCAATACGGAATACATATCAAAGTGAAATTCAGAGAATCTGGGCAA CTTCAGGTTCTAAGCTCTCACCACCAATCTGGAGGAGAGCGTTCTGTCTCAACTATCCTT TACCTCGTCTCTCTTCAAGATCTGACAAACTGTCCTTTCAGGGTTGTTGATGAGATTAAT CAAGGTATGGATCCCATAAATGAAAGGAAGATGTTTCAACAATTGGTTAGAGCTGCTAGT CAACCAAACACACCACAGTGCTTCTTACTGACCCCAAAACTCTTACCGGAGCTAGAATAC AGTGAAGCCTGTAGCATTCTGAACATCATGAACGGTCCTTATATCGCGGAGCCTTCAAAA GTTTGGAGCTTAGGTGATAGTTGGGGCAGTCTCAATAGACGGAGAACCGAAGCTAGTCAA TGTTCCTAACTTGATCATCTTTTCTGTTTTGGGTTTTCGAAGAACAATGTATTTTATGCT ATTAAACCGACCGGTCAGAGCAGATTGAACCTGAACCGATTTCGTTTTTATGGTTTGCAA ATGTAAAAAGTTCAATGGATAAAGTTT