Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G15400.1
CDS Infomation	\| U-box domain-containing protein \| Chr5:4997764-5002907 REVERSE LENGTH=3117 \| 201606
Sequence	ATGGCGACGAGCAAACCTCAAAGATCGCCGGCTGAAATTGAGGATATAATCCTCCGGAAG ATATTTTATGTAACCCTAACGGAATCAACTGATTCCGATCCTCGTATTGTTTACTTGGAG ATGACGGCCGCTGAGATTCTCAGCGAAGGTAAAGAGCTTTTGCTTTCTCGTGATTTGATG GAGAGAGTTCTCATAGATCGTCTCTCCGGCGACTTTTCCGACGCCGAACCGCCTTTCCCG TATTTAATCGGTTGCCACCGTCGTGCTTACGACGAATCGAAGAAAATCCAGTCGATGAAG GATAAGAATCTGAGATCGGAGATGGAGATTGTCACTAAACAAGCGAAGAAGCTTGCTGTT TCTTACTGTAGGATTCACTTGGGGAATCCTGACATGTTTGGGAACTCGGATAAACCTAGT GGTGGATTGGATAATAGGTTGAAGAAGAGGAATGTCTCTCCGGTTCTTCCGTTGATCTTT GCTGAGGTTGGTTCTGGTTCGTTGGATATGTTTGGAGCTAGTAGCAGTGGGGTTCAAGCT CCTCCTGGGTTTTTGGATGAGTTTTTCAAAGACTCGGATTTTGATAGCTTGGACTCGATT CTAAAGGAGCTGTATGAGGATTTGAGGTCTACGGTTATAAATGTATCAGTGCTTGGAGAT TTCCAGCCACCACTGAGGGCACTCAAGTATCTTGTTAGCTTACCAGTAGGAGCTAAATCT CTGGTTAGTCATGAGTGGTGGGTTCCACGGGGTGCCTATATGAACGGCCGAGCAATGGAG TTGACTAGCATTCTTGGGCCTTTCTTCCATATTAGTGCGCTGCCAGATAATACACTATTC AAGAGTCAACCTGATGTTGGGCAGCAGTGTTTCTCTGAAGCATCGGAACGTCGTCCCGCA GATTTATTATCATCCTTCTCCACGATTAAAAATTTCATGAACATTTTGTACAGCGGGCTG CATGATGTATTGATGATTTTACTTAAAAGTACTGATACCCGTGAGCGTGTTCTACAGTTT CTTGCAGAGGTGATCAATGCAAATGCGTCTAGAGCCCATATACAGGTTGATCCAGTCTCT TGTGCTAGCTCAGGCATGTTTGTTAACCTTAGTGCAGTAATGCTCCGGCTCTGTGAACCA TTTTTAGACCCACATTTAACGAAAAGGGATAAGATTGATCCAAAATACGCATTCTGTGGC CATCGCTTAAAATTAAGCGACTTGACCGCTCTCCATGCATCATCCGAAGAAGTTACTGAG TGGATTGGCAAAGATGCTATGGCAAACGCAAATGATGCTGGGCGAGAAAATGGGAACGAA AGTCGCTTGTTACAATCCAAAGAAGCCACAAGTTCTAGTAGTAATGCTTCTGGGCAAAAT GCAAAGTCAGCAACTAAATACACTTTCATTTGTGAATGCTTCTTTATGACTGCTAGGGTC CTCAATTTGGGTCTCCTAAAAGCACTCTCTGACTTTAAACATCTTGCTCAGGACATCTCG AGAGGTGAAGATAATCTTGCAACGCTAAAAGCCATGAGAGATCAAGCACCTTCTCCACAG TTGGAACTTGATATATCCCGAATGGAAAAAGAACTAGAGCTGTCTTCGCAGGAAAAGCTT TGCCATGAGGCCCAAATATTGAGGGATGGAGATTTTATTCAGCGAGCTCTGTCTTTCTAT CGCCTAATGGTTGTTTGGTTAGTTGGACTAGTCGGTGGCTTTAAGATGCCTCTACCGTCA ACTTGCCCTATGGAATTCTCCTGTATGCCTGAGCATTTTGTTGAAGATGCAATGGAGTTG CTGATATTCGCTTCAAGAATTCCCAAAGCTTTGGACGGGGTGCCGCTGGACGACTTTATG AACTTCATAATTATGTTCATGGCAAGTCCTGAATATGTTAGAAACCCGTATCTCAGAGCA AAGATGGTTGAAGTTCTGAACTGCTGGATGCCTCGTTCAAGTAGTTCTTCTTCTGCTACA TCTACTCTCTTTGAGGGACATCAGTTATCGCTCGAGTATCTTGTCAGGAATTTACTGAAA CTATATGTTGACATTGAGTTCACGGGTTCACACACTCAGTTCTATGACAAGTTCAATATT CGCCACAACATTGCCGAGCTTTTAGAGTATCTCTGGCAGGTGCCTAGTCACCGAAATGCA TGGAGACGGATTGCAAAAGACGAAGAGAAGGGCGTGTACTTGAACTTCTTAAACTTCTTA GTCAATGATAGCATCTATCTTCTGGATGAAAGTCTAAACAAAATTCTCGAGATTAAACAA ATCGAGGCAGACATGTCAAATACTGCAGAGTGGGAGCAGAGACCAACTCAAGAGAGACAG GAGAGAACAAGACTCTTCCATTCGCAGGAGAATATTGTTAGAATCGACATGAAGCTGGCA AATGAAGATGTGACTATGCTTGCATTTACATCCGAGGAGATCACTGCCCCTTTCCTACTC CCTGAGATGGTTGAGAGGGTTGCCAACATGCTTAACTACTTCTTGCTACAACTCGTGGGT CCACAGCGTAAATCTTTAAGCCTGAAAGATCCTGAGAAATATGAATTCCGTCCAAAACAG TTACTTAAACAGATCGTTCGCATATATGTTAATCTCGCAAGAGGAGACACAGTAAACATA TTCCCTGGTGCCATCTCCAGTGATGGCCGATCATATAATGAACAGCTATTCAATGCAGGA GCAGATGTGCTTAGGAGAATAGGTGAAGAGGGAAGAATCATTCAAGAGTTTATGGAGTTA GGCACAAAAGCCAAAGCTGCTGCTTCTGAAGCTCTGGATGCTGAAGCTGCACTTGGGGAA ATACCAGACGAGTTCCTTGACCCAATTCAGTACACGCTAATGAGAGATCCAGTAATACTT CCAAGCTCAAGAATCACAGTTGATCGTCCCATCATTCAACGTCATCTTCTCAGCGACAAT CATGATCCATTTAACCGAGCACATTTGACATCGGATATGTTGATACCGGACATCGAGTTG AAGGCGAAAATCGATGAGTTTGTGAAGTCGCATCAGTCTAAGAAACGGACAAGTGGAGAA GATAGCAGCAACAAGGAAAGGATACAGACTACAAACAGTGATATGTTAATTGATTAA

Peptide Sequence

PEP ID	AT5G15400.1
PEP Infomation	\| U-box domain-containing protein \| Chr5:4997764-5002907 REVERSE LENGTH=1038 \| 201606
Sequence	MATSKPQRSPAEIEDIILRKIFYVTLTESTDSDPRIVYLEMTAAEILSEGKELLLSRDLM ERVLIDRLSGDFSDAEPPFPYLIGCHRRAYDESKKIQSMKDKNLRSEMEIVTKQAKKLAV SYCRIHLGNPDMFGNSDKPSGGLDNRLKKRNVSPVLPLIFAEVGSGSLDMFGASSSGVQA PPGFLDEFFKDSDFDSLDSILKELYEDLRSTVINVSVLGDFQPPLRALKYLVSLPVGAKS LVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQCFSEASERRPA DLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRERVLQFLAEVINANASRAHIQVDPVS CASSGMFVNLSAVMLRLCEPFLDPHLTKRDKIDPKYAFCGHRLKLSDLTALHASSEEVTE WIGKDAMANANDAGRENGNESRLLQSKEATSSSSNASGQNAKSATKYTFICECFFMTARV LNLGLLKALSDFKHLAQDISRGEDNLATLKAMRDQAPSPQLELDISRMEKELELSSQEKL CHEAQILRDGDFIQRALSFYRLMVVWLVGLVGGFKMPLPSTCPMEFSCMPEHFVEDAMEL LIFASRIPKALDGVPLDDFMNFIIMFMASPEYVRNPYLRAKMVEVLNCWMPRSSSSSSAT STLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNA WRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIEADMSNTAEWEQRPTQERQ ERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVG PQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAG ADVLRRIGEEGRIIQEFMELGTKAKAAASEALDAEAALGEIPDEFLDPIQYTLMRDPVIL PSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSKKRTSGE DSSNKERIQTTNSDMLID

Transcript Sequence

Transcript ID	AT5G15400.1
Transcript Infomation	\| U-box domain-containing protein \| Chr5:4997489-5003253 REVERSE LENGTH=3738 \| 201606
Sequence	AAAAGTAATTGTCTTAATAAGTATAAACGACGTCGTTAGTAAGTACGACGTTTGCATATA TCCTATATAGACTTTTTGTCCAAGCTCAGGACTTGCTAAAGCTCGTTCAGAGACTCCAAA AGAGTTCATAAACAAAAACCTACTCCCAGAAAGTTCTTCCAAATCTCTCGCCATGGTTTC TCTCTTCTTTCGTGAATTTTAGTTTTTCTAAATTTAATTATACTTTAAATTGCTAAGTCC AAACTCTTTCGCTTTTGATTCATCGGTAATACAAGTTTAAGAAAAAAAATTCTTATATTT ATCTCTCAAATCGAGTTTCGAGTGTTTGATTTGATTCGTAAAATCAATGGCGACGAGCAA ACCTCAAAGATCGCCGGCTGAAATTGAGGATATAATCCTCCGGAAGATATTTTATGTAAC CCTAACGGAATCAACTGATTCCGATCCTCGTATTGTTTACTTGGAGATGACGGCCGCTGA GATTCTCAGCGAAGGTAAAGAGCTTTTGCTTTCTCGTGATTTGATGGAGAGAGTTCTCAT AGATCGTCTCTCCGGCGACTTTTCCGACGCCGAACCGCCTTTCCCGTATTTAATCGGTTG CCACCGTCGTGCTTACGACGAATCGAAGAAAATCCAGTCGATGAAGGATAAGAATCTGAG ATCGGAGATGGAGATTGTCACTAAACAAGCGAAGAAGCTTGCTGTTTCTTACTGTAGGAT TCACTTGGGGAATCCTGACATGTTTGGGAACTCGGATAAACCTAGTGGTGGATTGGATAA TAGGTTGAAGAAGAGGAATGTCTCTCCGGTTCTTCCGTTGATCTTTGCTGAGGTTGGTTC TGGTTCGTTGGATATGTTTGGAGCTAGTAGCAGTGGGGTTCAAGCTCCTCCTGGGTTTTT GGATGAGTTTTTCAAAGACTCGGATTTTGATAGCTTGGACTCGATTCTAAAGGAGCTGTA TGAGGATTTGAGGTCTACGGTTATAAATGTATCAGTGCTTGGAGATTTCCAGCCACCACT GAGGGCACTCAAGTATCTTGTTAGCTTACCAGTAGGAGCTAAATCTCTGGTTAGTCATGA GTGGTGGGTTCCACGGGGTGCCTATATGAACGGCCGAGCAATGGAGTTGACTAGCATTCT TGGGCCTTTCTTCCATATTAGTGCGCTGCCAGATAATACACTATTCAAGAGTCAACCTGA TGTTGGGCAGCAGTGTTTCTCTGAAGCATCGGAACGTCGTCCCGCAGATTTATTATCATC CTTCTCCACGATTAAAAATTTCATGAACATTTTGTACAGCGGGCTGCATGATGTATTGAT GATTTTACTTAAAAGTACTGATACCCGTGAGCGTGTTCTACAGTTTCTTGCAGAGGTGAT CAATGCAAATGCGTCTAGAGCCCATATACAGGTTGATCCAGTCTCTTGTGCTAGCTCAGG CATGTTTGTTAACCTTAGTGCAGTAATGCTCCGGCTCTGTGAACCATTTTTAGACCCACA TTTAACGAAAAGGGATAAGATTGATCCAAAATACGCATTCTGTGGCCATCGCTTAAAATT AAGCGACTTGACCGCTCTCCATGCATCATCCGAAGAAGTTACTGAGTGGATTGGCAAAGA TGCTATGGCAAACGCAAATGATGCTGGGCGAGAAAATGGGAACGAAAGTCGCTTGTTACA ATCCAAAGAAGCCACAAGTTCTAGTAGTAATGCTTCTGGGCAAAATGCAAAGTCAGCAAC TAAATACACTTTCATTTGTGAATGCTTCTTTATGACTGCTAGGGTCCTCAATTTGGGTCT CCTAAAAGCACTCTCTGACTTTAAACATCTTGCTCAGGACATCTCGAGAGGTGAAGATAA TCTTGCAACGCTAAAAGCCATGAGAGATCAAGCACCTTCTCCACAGTTGGAACTTGATAT ATCCCGAATGGAAAAAGAACTAGAGCTGTCTTCGCAGGAAAAGCTTTGCCATGAGGCCCA AATATTGAGGGATGGAGATTTTATTCAGCGAGCTCTGTCTTTCTATCGCCTAATGGTTGT TTGGTTAGTTGGACTAGTCGGTGGCTTTAAGATGCCTCTACCGTCAACTTGCCCTATGGA ATTCTCCTGTATGCCTGAGCATTTTGTTGAAGATGCAATGGAGTTGCTGATATTCGCTTC AAGAATTCCCAAAGCTTTGGACGGGGTGCCGCTGGACGACTTTATGAACTTCATAATTAT GTTCATGGCAAGTCCTGAATATGTTAGAAACCCGTATCTCAGAGCAAAGATGGTTGAAGT TCTGAACTGCTGGATGCCTCGTTCAAGTAGTTCTTCTTCTGCTACATCTACTCTCTTTGA GGGACATCAGTTATCGCTCGAGTATCTTGTCAGGAATTTACTGAAACTATATGTTGACAT TGAGTTCACGGGTTCACACACTCAGTTCTATGACAAGTTCAATATTCGCCACAACATTGC CGAGCTTTTAGAGTATCTCTGGCAGGTGCCTAGTCACCGAAATGCATGGAGACGGATTGC AAAAGACGAAGAGAAGGGCGTGTACTTGAACTTCTTAAACTTCTTAGTCAATGATAGCAT CTATCTTCTGGATGAAAGTCTAAACAAAATTCTCGAGATTAAACAAATCGAGGCAGACAT GTCAAATACTGCAGAGTGGGAGCAGAGACCAACTCAAGAGAGACAGGAGAGAACAAGACT CTTCCATTCGCAGGAGAATATTGTTAGAATCGACATGAAGCTGGCAAATGAAGATGTGAC TATGCTTGCATTTACATCCGAGGAGATCACTGCCCCTTTCCTACTCCCTGAGATGGTTGA GAGGGTTGCCAACATGCTTAACTACTTCTTGCTACAACTCGTGGGTCCACAGCGTAAATC TTTAAGCCTGAAAGATCCTGAGAAATATGAATTCCGTCCAAAACAGTTACTTAAACAGAT CGTTCGCATATATGTTAATCTCGCAAGAGGAGACACAGTAAACATATTCCCTGGTGCCAT CTCCAGTGATGGCCGATCATATAATGAACAGCTATTCAATGCAGGAGCAGATGTGCTTAG GAGAATAGGTGAAGAGGGAAGAATCATTCAAGAGTTTATGGAGTTAGGCACAAAAGCCAA AGCTGCTGCTTCTGAAGCTCTGGATGCTGAAGCTGCACTTGGGGAAATACCAGACGAGTT CCTTGACCCAATTCAGTACACGCTAATGAGAGATCCAGTAATACTTCCAAGCTCAAGAAT CACAGTTGATCGTCCCATCATTCAACGTCATCTTCTCAGCGACAATCATGATCCATTTAA CCGAGCACATTTGACATCGGATATGTTGATACCGGACATCGAGTTGAAGGCGAAAATCGA TGAGTTTGTGAAGTCGCATCAGTCTAAGAAACGGACAAGTGGAGAAGATAGCAGCAACAA GGAAAGGATACAGACTACAAACAGTGATATGTTAATTGATTAATTATGTGTTCCAAAAGT AACAAAATAATAACAATTATTCAGGACTTTTTTTTTTTACTTTTGCTAGGCTTTCTTTTC TATTAGGATTTATCTATCTATTTTAGGGCTTGCTTTCCACTTATTTGATGCCACGGGAAA AAAACTTATAAATATCATGTCTAGAACTGTTTCTATCATAAGTTCGATGTGTTCACGAGT TTCTATGCATTTCGACGTTTGTTCATGGATTACTAGTTGGCATAAGAGTTATGAGTGACC AATTCTTGAAAGGCGAAA