Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G14820.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:4792072-4793868 REVERSE LENGTH=1797 \| 201606
Sequence	ATGGCTGCTGCTCCATGGCTCTATCTCTCTAGGAGAAGAAGCTCCACTCAGACTTCATTA AGAAGATTCCTCATTTGCTCTTCTTCATTCGATGCCGATGAATTCATTTCCAGTCAAAGC CGCGTAATCGGCGGGAGAGGAGAAGAGGAAGTACGATTTTCCGGTGCTCTCTTCTCTCGT ATGATTCATTCTTCTACTTATCATCCTTACCGTCAAATTCCATTGCCACACTCTGTACAA CTGCTTGATGCGAGTCTTGGGTGTAGAGGTTTCTCTAGTGGTAGTTCTAATGTTAGTGAT GGATGTGATGAAGAAGTTGAATCTGAATGCGATAATGATGAAGAAACTGGGGTCAGTTGT GTTGAATCAAGTACTAATCCGGAAGAAGTAGAGAGAGTCTGCAAAGTGATTGATGAATTG TTTGCGTTAGATAGAAATATGGAAGCTGTTCTTGATGAAATGAAACTAGATTTATCACAT GATCTCATCGTTGAGGTTTTAGAACGTTTTCGACATGCTAGGAAGCCTGCATTTAGGTTC TTCTGTTGGGCTGCAGAGAGACAAGGATTTGCTCATGACTCAAGAACATATAACTCCATG ATGAGTATTTTAGCAAAGACTAGACAGTTCGAGACGATGGTTTCGGTACTCGAAGAGATG GGTACGAAAGGTCTATTGACGATGGAGACATTCACTATCGCGATGAAAGCTTTCGCTGCT GCGAAAGAGAGGAAGAAAGCTGTTGGTATCTTTGAGTTGATGAAGAAGTACAAGTTTAAG ATTGGTGTTGAAACCATTAATTGCTTGCTTGATAGTCTTGGCAGGGCTAAGCTTGGAAAA GAAGCTCAGGTTCTGTTTGATAAGCTGAAGGAGAGGTTTACACCTAATATGATGACTTAC ACTGTTCTACTCAATGGTTGGTGCAGGGTGAGGAACTTGATAGAAGCAGCTAGAATCTGG AATGATATGATTGATCACGGATTGAAACCTGACATTGTAGCTCACAACGTAATGCTTGAA GGGTTGTTGAGGAGTATGAAAAAATCAGATGCGATCAAATTGTTCCATGTTATGAAATCC AAGGGACCTTGCCCTAATGTCCGTAGCTATACCATCATGATCCGGGACTTCTGCAAACAG TCGAGCATGGAAACTGCCATTGAGTACTTTGATGACATGGTTGATTCCGGGTTGCAACCT GATGCTGCGGTTTACACGTGTCTGATCACGGGGTTTGGGACTCAGAAGAAGCTGGATACT GTTTACGAACTGCTCAAGGAGATGCAAGAAAAGGGACACCCTCCGGATGGCAAAACGTAT AATGCGTTGATCAAACTGATGGCGAACCAGAAAATGCCGGAACATGGCACAAGGATCTAC AACAAGATGATCCAGAACGAAATTGAGCCATCGATACACACGTTCAACATGATAATGAAA TCTTACTTCGTGGCGAGAAACTATGAGATGGGGAGAGCAGTTTGGGACGAGATGATCAAG AAAGGGATTTGTCCTGACGATAACTCCTACACGGTTTTGATCAGAGGGCTTATAAGTGAA GGGAAGTCGAGAGAGGCATGCAGATACTTGGAGGAGATGCTTGACAAAGGAATGAAAACC CCTTTGATTGATTATAACAAGTTTGCAGCTGATTTCCACAGAGGGGGACAACCGGAGATA TTTGAGGAATTGGCACAGAGAGCTAAGTTCTCAGGTAAGTTTGCTGCAGCAGAGATCTTT GCGAGATGGGCTCAGATGACTAGAAGGAGATGCAAACAGAGATTCATGGAAGATTGA

Peptide Sequence

PEP ID	AT5G14820.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:4792072-4793868 REVERSE LENGTH=598 \| 201606
Sequence	MAAAPWLYLSRRRSSTQTSLRRFLICSSSFDADEFISSQSRVIGGRGEEEVRFSGALFSR MIHSSTYHPYRQIPLPHSVQLLDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSC VESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAA AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK SYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT PLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQRFMED

Transcript Sequence

Transcript ID	AT5G14820.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:4792072-4794153 REVERSE LENGTH=2082 \| 201606
Sequence	CGTCCATTTGCATTGCCAGCTCCCCAGCTCGCCAGCTCACAAGTACTTTGCCTAACATCC GACTTCATATTGCCAGCTCGCCAGCTCGTTTATATGCGTTTGAGCTTTAATGCTCCTGGT GGACCCAATGGTTATATGTGACCAGATCAATGGGCCTTTAATGGGTCAAAATTATTATCA CTCAAAGCTTCTAATCAAACAAAGGCCCAAATACGTGAAGAGCTCTCCGCCGTAAATCAG TGGCTTTTCACCGACTTCGCCATTGCTAATCGCCGTCGAGCTTCCATGGCTGCTGCTCCA TGGCTCTATCTCTCTAGGAGAAGAAGCTCCACTCAGACTTCATTAAGAAGATTCCTCATT TGCTCTTCTTCATTCGATGCCGATGAATTCATTTCCAGTCAAAGCCGCGTAATCGGCGGG AGAGGAGAAGAGGAAGTACGATTTTCCGGTGCTCTCTTCTCTCGTATGATTCATTCTTCT ACTTATCATCCTTACCGTCAAATTCCATTGCCACACTCTGTACAACTGCTTGATGCGAGT CTTGGGTGTAGAGGTTTCTCTAGTGGTAGTTCTAATGTTAGTGATGGATGTGATGAAGAA GTTGAATCTGAATGCGATAATGATGAAGAAACTGGGGTCAGTTGTGTTGAATCAAGTACT AATCCGGAAGAAGTAGAGAGAGTCTGCAAAGTGATTGATGAATTGTTTGCGTTAGATAGA AATATGGAAGCTGTTCTTGATGAAATGAAACTAGATTTATCACATGATCTCATCGTTGAG GTTTTAGAACGTTTTCGACATGCTAGGAAGCCTGCATTTAGGTTCTTCTGTTGGGCTGCA GAGAGACAAGGATTTGCTCATGACTCAAGAACATATAACTCCATGATGAGTATTTTAGCA AAGACTAGACAGTTCGAGACGATGGTTTCGGTACTCGAAGAGATGGGTACGAAAGGTCTA TTGACGATGGAGACATTCACTATCGCGATGAAAGCTTTCGCTGCTGCGAAAGAGAGGAAG AAAGCTGTTGGTATCTTTGAGTTGATGAAGAAGTACAAGTTTAAGATTGGTGTTGAAACC ATTAATTGCTTGCTTGATAGTCTTGGCAGGGCTAAGCTTGGAAAAGAAGCTCAGGTTCTG TTTGATAAGCTGAAGGAGAGGTTTACACCTAATATGATGACTTACACTGTTCTACTCAAT GGTTGGTGCAGGGTGAGGAACTTGATAGAAGCAGCTAGAATCTGGAATGATATGATTGAT CACGGATTGAAACCTGACATTGTAGCTCACAACGTAATGCTTGAAGGGTTGTTGAGGAGT ATGAAAAAATCAGATGCGATCAAATTGTTCCATGTTATGAAATCCAAGGGACCTTGCCCT AATGTCCGTAGCTATACCATCATGATCCGGGACTTCTGCAAACAGTCGAGCATGGAAACT GCCATTGAGTACTTTGATGACATGGTTGATTCCGGGTTGCAACCTGATGCTGCGGTTTAC ACGTGTCTGATCACGGGGTTTGGGACTCAGAAGAAGCTGGATACTGTTTACGAACTGCTC AAGGAGATGCAAGAAAAGGGACACCCTCCGGATGGCAAAACGTATAATGCGTTGATCAAA CTGATGGCGAACCAGAAAATGCCGGAACATGGCACAAGGATCTACAACAAGATGATCCAG AACGAAATTGAGCCATCGATACACACGTTCAACATGATAATGAAATCTTACTTCGTGGCG AGAAACTATGAGATGGGGAGAGCAGTTTGGGACGAGATGATCAAGAAAGGGATTTGTCCT GACGATAACTCCTACACGGTTTTGATCAGAGGGCTTATAAGTGAAGGGAAGTCGAGAGAG GCATGCAGATACTTGGAGGAGATGCTTGACAAAGGAATGAAAACCCCTTTGATTGATTAT AACAAGTTTGCAGCTGATTTCCACAGAGGGGGACAACCGGAGATATTTGAGGAATTGGCA CAGAGAGCTAAGTTCTCAGGTAAGTTTGCTGCAGCAGAGATCTTTGCGAGATGGGCTCAG ATGACTAGAAGGAGATGCAAACAGAGATTCATGGAAGATTGA