Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G13600.1
CDS Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:4380432-4382497 FORWARD LENGTH=1776 \| 201606
Sequence	ATGGCTAGCTTGAAACTGGGTTCCAAATCTGAAGTCTTTCATCTTAGTGGTCACACATGG CTTTGCAAGACTGGTCTTAAGCCCGATGTTATGATCCAAGTCGTAGACGAAAGCTTCCAT CTCCATAAGTTTCCTTTGTTGTCAAGAAGTGGATATCTAGAAACTCTGTTCAGCAAAGCC TCTGAGACAACTTGTGTTGCTCAGCTTCATGACATTCCCGGTGGTCCTGAAACATTCTTG CTTGTAGCTAAGTTTTGTTACGGTGTAAGAATTGAGGTCACACCTGAAAACGCTGTGAGT CTCAGATGTGCAGCAGAGTATCTCCAAATGAGTGAAAACTATGGAGATGCAAATCTCATC TATCTCACTGAGAGTTTCCTCAACGATCACGTATTCGTAAACTGGGAAGATTCCATCAAG GCCCTGGAGAAATCATGCGAACCAAAAGTGTTGCCTCTCGCTGAAGAGCTTCACATTGTT TCTAGGTGCATTGGTTCTTTAGCCATGAAGGCTTGTGCAGAGGACAACACAAGTTTTTTC AACTGGCCAATCTCACTACCTGAAGGAACCACTACTACTACTATATATTGGAACGGAATA CAAACAAAGGCCACGAGCGAAAACTGGTGGTTCAACGATGTATCATCGTTCCTAGATTTA CCAATGTACAAAAGGTTCATCAAAACTGTTGAATCCAGAGGCGTAAATGCGGGTATCATA GCAGCATCTGTCACACATTACGCCAAACGGAATCTTCCTTTACTTGGTTGTTCTAGGAAA TCTGGTTCTCCTTCAGAGGAAGGGACTAACTATGGAGATGACATGTACTATTCACATGAA GAACAACGAAGTCTCCTTGAGGAAATCGTGGAACTTCTCCCGGGCAAAAAGTGCGTTACA TCGACAAAATTCTTGCTCAGGCTTCTTAGGACATCAATGGTTCTGCACGCGAGTCAGGTC ACTCAGGAGACTCTGGAGAAGAGAATTGGAATGCAGCTAGACGAAGCTGCTCTAGAGGAT TTACTAATACCAAACATGAAATACTCAGGTGAAACACTCTATGATACTGACTCTGTCCAG AGGATTCTTGATCACTTCATGTTGACGTTTGATTCAAGTATTGTTGAGGAGAAGCAAATG ATGGGAGATTCTCATCCTCTTAAGTCCATCACAAAGGTTGCTAGTCTGATAGACGGCTAC TTAGCAGAGGTGGCGTCCGATGAGAACTTGAAACTATCGAAATTTCAAGCACTTGGTGCT CTAATCCCGGAAGACGTGAGACCAATGGATGACGGTATCTACCGTGCAATAGATATATAC ATAAAGGCTCATCCATGGCTAACAGAGTCAGAGAGAGAACAGTTGTGCCTGCTTATGAAT TGTCAGAAACTGTCATTGGAGGCATGCACACACGCAGCACAAAACGAGCGTCTACCATTG CGGGTCATAGTACAAGTCCTGTTCTTTGAACAGATGCGGCTTCGGACATCTATAGCAGGA TGGTTATTCGGCTCGGAGGAAAACAATGACACAAGCGGCGCGTTAGAAGGAAACAAGAAC ACAAACGCAAATATGGTGATGCATGGGATGAGAGAACGCGTATTCGAGCTTGAAAAAGAA TGTATGAGCATGAAGCAAGATCTTGATAAGCTTGTCAAGACAAAAGAAGGACGCAACTTC TTCTCTAAGATATTCGGATCAAGATCTAAGACTAAGACTTCACCATGCGGTAAAGGAGGT GAGGACGCTCTAGTGATTCCTGAAACCAAAAATTGA

Peptide Sequence

PEP ID	AT5G13600.1
PEP Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:4380432-4382497 FORWARD LENGTH=591 \| 201606
Sequence	MASLKLGSKSEVFHLSGHTWLCKTGLKPDVMIQVVDESFHLHKFPLLSRSGYLETLFSKA SETTCVAQLHDIPGGPETFLLVAKFCYGVRIEVTPENAVSLRCAAEYLQMSENYGDANLI YLTESFLNDHVFVNWEDSIKALEKSCEPKVLPLAEELHIVSRCIGSLAMKACAEDNTSFF NWPISLPEGTTTTTIYWNGIQTKATSENWWFNDVSSFLDLPMYKRFIKTVESRGVNAGII AASVTHYAKRNLPLLGCSRKSGSPSEEGTNYGDDMYYSHEEQRSLLEEIVELLPGKKCVT STKFLLRLLRTSMVLHASQVTQETLEKRIGMQLDEAALEDLLIPNMKYSGETLYDTDSVQ RILDHFMLTFDSSIVEEKQMMGDSHPLKSITKVASLIDGYLAEVASDENLKLSKFQALGA LIPEDVRPMDDGIYRAIDIYIKAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPL RVIVQVLFFEQMRLRTSIAGWLFGSEENNDTSGALEGNKNTNANMVMHGMRERVFELEKE CMSMKQDLDKLVKTKEGRNFFSKIFGSRSKTKTSPCGKGGEDALVIPETKN

Transcript Sequence

Transcript ID	AT5G13600.1
Transcript Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:4380432-4382497 FORWARD LENGTH=1776 \| 201606
Sequence	ATGGCTAGCTTGAAACTGGGTTCCAAATCTGAAGTCTTTCATCTTAGTGGTCACACATGG CTTTGCAAGACTGGTCTTAAGCCCGATGTTATGATCCAAGTCGTAGACGAAAGCTTCCAT CTCCATAAGTTTCCTTTGTTGTCAAGAAGTGGATATCTAGAAACTCTGTTCAGCAAAGCC TCTGAGACAACTTGTGTTGCTCAGCTTCATGACATTCCCGGTGGTCCTGAAACATTCTTG CTTGTAGCTAAGTTTTGTTACGGTGTAAGAATTGAGGTCACACCTGAAAACGCTGTGAGT CTCAGATGTGCAGCAGAGTATCTCCAAATGAGTGAAAACTATGGAGATGCAAATCTCATC TATCTCACTGAGAGTTTCCTCAACGATCACGTATTCGTAAACTGGGAAGATTCCATCAAG GCCCTGGAGAAATCATGCGAACCAAAAGTGTTGCCTCTCGCTGAAGAGCTTCACATTGTT TCTAGGTGCATTGGTTCTTTAGCCATGAAGGCTTGTGCAGAGGACAACACAAGTTTTTTC AACTGGCCAATCTCACTACCTGAAGGAACCACTACTACTACTATATATTGGAACGGAATA CAAACAAAGGCCACGAGCGAAAACTGGTGGTTCAACGATGTATCATCGTTCCTAGATTTA CCAATGTACAAAAGGTTCATCAAAACTGTTGAATCCAGAGGCGTAAATGCGGGTATCATA GCAGCATCTGTCACACATTACGCCAAACGGAATCTTCCTTTACTTGGTTGTTCTAGGAAA TCTGGTTCTCCTTCAGAGGAAGGGACTAACTATGGAGATGACATGTACTATTCACATGAA GAACAACGAAGTCTCCTTGAGGAAATCGTGGAACTTCTCCCGGGCAAAAAGTGCGTTACA TCGACAAAATTCTTGCTCAGGCTTCTTAGGACATCAATGGTTCTGCACGCGAGTCAGGTC ACTCAGGAGACTCTGGAGAAGAGAATTGGAATGCAGCTAGACGAAGCTGCTCTAGAGGAT TTACTAATACCAAACATGAAATACTCAGGTGAAACACTCTATGATACTGACTCTGTCCAG AGGATTCTTGATCACTTCATGTTGACGTTTGATTCAAGTATTGTTGAGGAGAAGCAAATG ATGGGAGATTCTCATCCTCTTAAGTCCATCACAAAGGTTGCTAGTCTGATAGACGGCTAC TTAGCAGAGGTGGCGTCCGATGAGAACTTGAAACTATCGAAATTTCAAGCACTTGGTGCT CTAATCCCGGAAGACGTGAGACCAATGGATGACGGTATCTACCGTGCAATAGATATATAC ATAAAGGCTCATCCATGGCTAACAGAGTCAGAGAGAGAACAGTTGTGCCTGCTTATGAAT TGTCAGAAACTGTCATTGGAGGCATGCACACACGCAGCACAAAACGAGCGTCTACCATTG CGGGTCATAGTACAAGTCCTGTTCTTTGAACAGATGCGGCTTCGGACATCTATAGCAGGA TGGTTATTCGGCTCGGAGGAAAACAATGACACAAGCGGCGCGTTAGAAGGAAACAAGAAC ACAAACGCAAATATGGTGATGCATGGGATGAGAGAACGCGTATTCGAGCTTGAAAAAGAA TGTATGAGCATGAAGCAAGATCTTGATAAGCTTGTCAAGACAAAAGAAGGACGCAACTTC TTCTCTAAGATATTCGGATCAAGATCTAAGACTAAGACTTCACCATGCGGTAAAGGAGGT GAGGACGCTCTAGTGATTCCTGAAACCAAAAATTGA