Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G13560.1
CDS Infomation	\| structural maintenance of chromosomes protein \| Chr5:4361579-4366318 REVERSE LENGTH=2040 \| 201606
Sequence	ATGTCGTGGCTGCGAACGGCCGTGAATAAGGCTGTGGAGGTCGGAAACCGCAAAAACATC ACACGAACCGTCAAAAACTATGCCGACTCCGTCGTCCAGCACGCTGGCCAAGCCGTCGCT GAAGGAGCCAAATTGTTCCAAGACCGCATTGGTGTTGGGGCTTATAAGAGTGTTCATCAG ACAATTCAGAGATTGGAAGAAGCTGCAGTCTCATATAGAGGTCAAGAAAGGGCATTGCTG ATTACTAGATGGCTAAGTGTGCTTAAGGAGATTGATAGAGCTACTGACAGTTCTCTAAAG GATAAACAATTGAGTTCAGAGGAACAACTTGCTTCTGATGAAGCAAAGAAACGTGAATGG GTTTTGTATTACGATCCAGATATAGGCGGTGAGCCACTTAACTTCCGTGATGTTTTTCTG CAAAGTCAAGCTCTGGAGGGGATCGTTCTGTCCATGATTATTGAACCACCACATGACGAA GAAATCACGCTACTCCTGGAGATGTTTGGCCTTTGTTTGAATGGAGGAAAGGAAGTTCAT GATGCCATAGTTAGCAGTATGCAGGATCTTGCTACAGTCTTTTCAAGTTACAAGGATGAA GTTTTGGTTAAGCAGGACGAATTGCTTCAGTTTGCCCAAAATGCCATCACAGGGTTGAAG ATTAATGCTGAAATGCTGAGAATTGATGCTGAAGCTTCTGATTTGAGAAAGAAACTCGAA AAGATGAATGCCTCTCAAATTCCACAGGAGAGTGAAGACAAGGAACATAAAGAGACTCCT TTAACAATAGAGGCTTTCAAAGAAACACTTGCAAAGATTCGTCTTTGCTCCAGATTAGAA GGTCTTCTAATTAGAAAGAGACAACTAAGCAATGGTGACTCACCAGATATACATGCTCAG AAAGTCGACAAGCTCAGGGTGTTATTAGAATCTTTAGCAAATTCAACTTCCAAAGCCGAG AAACGAATATCAGAGAACAGACTTCAGAAAGAGGAAGCACTAAAAGCTCGTGTGGTGAAA GCAAATGAAACCGGTGAAAAGGAAAAGGAGTTGGGTGCCGAAATTGCACAGCTTGAGAAA CAAAGAGATGAGCTGGAAGCCGATCTGAAGAGGGTAAATCTATCGTTAGCTGCTGCTCAA GCTCGGTTTCGTAATGCGACAGAGGAGAGGGATCAATTTGGTGAAGCCAACAATCAGATA ATCGCTCACCTGAAAACGAAGGATGATGACCTGTCCAAATCAGTTGTAGCTTGTAAGAAA GAAGCAGAAGTTATCAAGACGTGGATTAATTTTCTTGAGGATACATGGCTTCTTCAGTGC TCACATATCGAAACGAAGGATAAGCAGACTTTGGACGAATTGGAGAAGCATGAAGATTAC TTCTCGGATGTGGCCTTGAATATACTCTCTGTGTACAAGAAGGAGGTGGCACCTTTAATA AGTCGTATAGAAAATTATGTGGAAAATCTGAAGAATCTGGGTCCTGGGTCGGAGAAGCCA CCAAATGCAGATCAGGGAGACAATCAGGTATCAAACCCGAGGAAAATTCTGGAGGAGGAG TATATAGACTATGAGACCAAGATCATTACCACATTCAGCATTGTGGACAACGTGAAAGAG CAATTCCAGGTTCTCCAAAGCAAACTGGATAAAAAGGACGACCGGCGTGTGAAAGAGCTG TTTGATGACATGGAGAAAATGAGGCAGCAATTTGAATCCATAGCGAGGCCAACGTTAGAG ATAGAGATTCCATCACCTAGAAGCAGTGTTACGTCCCCTAAAAGCAGTGCTACATCACCC AAATCTCCCAAGCCTAGCAGTAGTAGCATGAATGCTTCAACTGAATCTACTCAGACCCAA AAGCCAGAGCTGAGCAATTCTCCTCAGGCACCCAATCCTGCAGCTGGTTCCAGTCAAGAG TTTAACCCTGAAGCCGAACTAGCCGAGCTGGAATCTGAATTTGGTAAGGTGGCTCGTGAT TACTCTGCAGATGAGGTTGATGGATGGGAATTCGATGAACTGGAGAAAGAACTGCAGTAG

Peptide Sequence

PEP ID	AT5G13560.1
PEP Infomation	\| structural maintenance of chromosomes protein \| Chr5:4361579-4366318 REVERSE LENGTH=679 \| 201606
Sequence	MSWLRTAVNKAVEVGNRKNITRTVKNYADSVVQHAGQAVAEGAKLFQDRIGVGAYKSVHQ TIQRLEEAAVSYRGQERALLITRWLSVLKEIDRATDSSLKDKQLSSEEQLASDEAKKREW VLYYDPDIGGEPLNFRDVFLQSQALEGIVLSMIIEPPHDEEITLLLEMFGLCLNGGKEVH DAIVSSMQDLATVFSSYKDEVLVKQDELLQFAQNAITGLKINAEMLRIDAEASDLRKKLE KMNASQIPQESEDKEHKETPLTIEAFKETLAKIRLCSRLEGLLIRKRQLSNGDSPDIHAQ KVDKLRVLLESLANSTSKAEKRISENRLQKEEALKARVVKANETGEKEKELGAEIAQLEK QRDELEADLKRVNLSLAAAQARFRNATEERDQFGEANNQIIAHLKTKDDDLSKSVVACKK EAEVIKTWINFLEDTWLLQCSHIETKDKQTLDELEKHEDYFSDVALNILSVYKKEVAPLI SRIENYVENLKNLGPGSEKPPNADQGDNQVSNPRKILEEEYIDYETKIITTFSIVDNVKE QFQVLQSKLDKKDDRRVKELFDDMEKMRQQFESIARPTLEIEIPSPRSSVTSPKSSATSP KSPKPSSSSMNASTESTQTQKPELSNSPQAPNPAAGSSQEFNPEAELAELESEFGKVARD YSADEVDGWEFDELEKELQ

Transcript Sequence

Transcript ID	AT5G13560.1
Transcript Infomation	\| structural maintenance of chromosomes protein \| Chr5:4360366-4366501 REVERSE LENGTH=3436 \| 201606
Sequence	GCTACATTTCAGAAAAGAAATAATATATTAGTCGCCTGCAAATCGTCAAACTTAAACCGA GTAAAAAAAAACTTTGATGGACGGTGGCCGAGTTCTCTCATTTCAGTAATTAGTCGTCTC TAAAATTGGTTTTCGTTCCCCGAGGAGGTTTCTTCCCTAGTAGACCATAAGATCGCTGAG AATATGTCGTGGCTGCGAACGGCCGTGAATAAGGCTGTGGAGGTCGGAAACCGCAAAAAC ATCACACGAACCGTCAAAAACTATGCCGACTCCGTCGTCCAGCACGCTGGCCAAGCCGTC GCTGAAGGAGCCAAATTGTTCCAAGACCGCATTGGTGTTGGGGCTTATAAGAGTGTTCAT CAGACAATTCAGAGATTGGAAGAAGCTGCAGTCTCATATAGAGGTCAAGAAAGGGCATTG CTGATTACTAGATGGCTAAGTGTGCTTAAGGAGATTGATAGAGCTACTGACAGTTCTCTA AAGGATAAACAATTGAGTTCAGAGGAACAACTTGCTTCTGATGAAGCAAAGAAACGTGAA TGGGTTTTGTATTACGATCCAGATATAGGCGGTGAGCCACTTAACTTCCGTGATGTTTTT CTGCAAAGTCAAGCTCTGGAGGGGATCGTTCTGTCCATGATTATTGAACCACCACATGAC GAAGAAATCACGCTACTCCTGGAGATGTTTGGCCTTTGTTTGAATGGAGGAAAGGAAGTT CATGATGCCATAGTTAGCAGTATGCAGGATCTTGCTACAGTCTTTTCAAGTTACAAGGAT GAAGTTTTGGTTAAGCAGGACGAATTGCTTCAGTTTGCCCAAAATGCCATCACAGGGTTG AAGATTAATGCTGAAATGCTGAGAATTGATGCTGAAGCTTCTGATTTGAGAAAGAAACTC GAAAAGATGAATGCCTCTCAAATTCCACAGGAGAGTGAAGACAAGGAACATAAAGAGACT CCTTTAACAATAGAGGCTTTCAAAGAAACACTTGCAAAGATTCGTCTTTGCTCCAGATTA GAAGGTCTTCTAATTAGAAAGAGACAACTAAGCAATGGTGACTCACCAGATATACATGCT CAGAAAGTCGACAAGCTCAGGGTGTTATTAGAATCTTTAGCAAATTCAACTTCCAAAGCC GAGAAACGAATATCAGAGAACAGACTTCAGAAAGAGGAAGCACTAAAAGCTCGTGTGGTG AAAGCAAATGAAACCGGTGAAAAGGAAAAGGAGTTGGGTGCCGAAATTGCACAGCTTGAG AAACAAAGAGATGAGCTGGAAGCCGATCTGAAGAGGGTAAATCTATCGTTAGCTGCTGCT CAAGCTCGGTTTCGTAATGCGACAGAGGAGAGGGATCAATTTGGTGAAGCCAACAATCAG ATAATCGCTCACCTGAAAACGAAGGATGATGACCTGTCCAAATCAGTTGTAGCTTGTAAG AAAGAAGCAGAAGTTATCAAGACGTGGATTAATTTTCTTGAGGATACATGGCTTCTTCAG TGCTCACATATCGAAACGAAGGATAAGCAGACTTTGGACGAATTGGAGAAGCATGAAGAT TACTTCTCGGATGTGGCCTTGAATATACTCTCTGTGTACAAGAAGGAGGTGGCACCTTTA ATAAGTCGTATAGAAAATTATGTGGAAAATCTGAAGAATCTGGGTCCTGGGTCGGAGAAG CCACCAAATGCAGATCAGGGAGACAATCAGGTATCAAACCCGAGGAAAATTCTGGAGGAG GAGTATATAGACTATGAGACCAAGATCATTACCACATTCAGCATTGTGGACAACGTGAAA GAGCAATTCCAGGTTCTCCAAAGCAAACTGGATAAAAAGGACGACCGGCGTGTGAAAGAG CTGTTTGATGACATGGAGAAAATGAGGCAGCAATTTGAATCCATAGCGAGGCCAACGTTA GAGATAGAGATTCCATCACCTAGAAGCAGTGTTACGTCCCCTAAAAGCAGTGCTACATCA CCCAAATCTCCCAAGCCTAGCAGTAGTAGCATGAATGCTTCAACTGAATCTACTCAGACC CAAAAGCCAGAGCTGAGCAATTCTCCTCAGGCACCCAATCCTGCAGCTGGTTCCAGTCAA GAGTTTAACCCTGAAGCCGAACTAGCCGAGCTGGAATCTGAATTTGGTAAGGTGGCTCGT GATTACTCTGCAGATGAGGTTGATGGATGGGAATTCGATGAACTGGAGAAAGAACTGCAG TAGTATGATCCATCACACGCCTGCCTCACATACACTGATATGTTTTTCATTTACTTTCTT TGTTTGACCATAACTCCGAAGTTCCTTTGTTAATCTGTTTGGTAATTTATGGTAACTGCC TGTTGACTTTTGTATGTCTACTTTTTTTTTTTTTTGCTCATAAGTGTTGTCTCTTATTTA AACCAAAGATTGTAAAGATTACAAAAGAGTGGAAACCTCCGCTTTCAGTCTCCAGACAAA AACAAAATAAAGATAAAAGTCCAACTAAATTAAAGCCCAGTTGAAGCAAGAAACCCTTTT AGGAAGTAATTGATGTAGTCCACCGCCGATTTGGTTAGTCATTGCAGGGAACTCCAAAAC CACCAGGAACCACCAAGACTTCAAGCTTGTCCGATGGAGCAACACAAAATTCAGAGAATC CCATCAATCTTCTTCATCTTCGAATTCGCAAAGGAAAATCTCCCCTGGGTAGTCATATCA TCATCTTCAAACGACATCAGCGTAGAACTTAAGCCAATGAAACTTCCATGAACACCTAAA AGTAAAATAAAAACACTCGTTTCCAAAAACCAATATGACAATTGACTCAATTGCATAAAA CCCAACTCAAAGGCATTAGAGAAAACCCCAATCCACAACTCTAATTTGTTCTTATATAAT TGAAATCGATAAGCTTGAAAAACAAATTGAGCCCTTTAAACAAAGGAGGTTCAAGGAATT GAGCCCTCTAAGAGTTAGAACACAAAGGAGCAAAATCAAACTGGATCTATAGAAAACGAG AACATAAAACAAAACCGAAAAAGAAATCCGGCCAAAAGCTAGCCTAAACCGCCGGAGACG GACGACGGAGAAGCTAGACAAGAGCCAACCACCGTTGGTAGAGGAACCAACCGATGGAGG ACGGCGACACCGGACAATTCTGCTAAAGGAGCCAGAAGATTCCGGGAAAGTAACCGACCA ACCACATCACAAGAGGCATATGGATGTCGGGCTGAAGCCTGTCAAGCGGACTGGACCGGC CCGCTAGACTCACACATCACAGTGGGTTTAATAATGTTTTACTGTTAATGAATGGGCCTC TCAAGACAATGTGCTAATCCATTCCTTGCTAGTTTTTGCTCAACTTTTAGCATGTAGTGT TTAACGTTTTCCTTGTGTATGCGTATCTAAATTGGAACTTATGTGACCATCAAGACAGTT TGGAATTTCATCAAAG